RNA–Protein interactions for RNA: ENST00000463007.5

HDAC4-208, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,158 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-208ENST00000463007 M0QXV9 152 aa8.92□□□□□ -0.98
HDAC4-208ENST00000463007 LINC00242Q5T6M2 205 aa8.92□□□□□ -0.98
HDAC4-208ENST00000463007 SPANXA1Q9NS26 97 aa8.92□□□□□ -0.98
HDAC4-208ENST00000463007 ATP5G1P05496 136 aa8.92□□□□□ -0.98
HDAC4-208ENST00000463007 PFN2P35080 140 aa8.92□□□□□ -0.98
HDAC4-208ENST00000463007 PPDPFQ9H3Y8 114 aa8.92□□□□□ -0.98
HDAC4-208ENST00000463007 Q6ZTI0 123 aa8.91□□□□□ -0.98
HDAC4-208ENST00000463007 C4orf3Q8WVX3 66 aa8.91□□□□□ -0.98
HDAC4-208ENST00000463007 FAM218AQ96MZ4 157 aa8.91□□□□□ -0.98
HDAC4-208ENST00000463007 SMCR5Q8TEV8 140 aa8.91□□□□□ -0.98
HDAC4-208ENST00000463007 LOC100131303A0A0U1RQF7 123 aa8.91□□□□□ -0.98
HDAC4-208ENST00000463007 OR13C6PQ8NH95 151 aa8.9□□□□□ -0.98
HDAC4-208ENST00000463007 KLK5Q9Y337 293 aaPredicted RBP8.9□□□□□ -0.98
HDAC4-208ENST00000463007 TMEM86BQ8N661 226 aa8.9□□□□□ -0.98
HDAC4-208ENST00000463007 EDA2RQ9HAV5 297 aa8.9□□□□□ -0.98
HDAC4-208ENST00000463007 MAP6D1Q9H9H5 199 aa8.89□□□□□ -0.99
HDAC4-208ENST00000463007 NDUFA1O15239 70 aa8.89□□□□□ -0.99
HDAC4-208ENST00000463007 LINC00158P58513 81 aa8.89□□□□□ -0.99
HDAC4-208ENST00000463007 UBE2L6O14933 153 aa8.89□□□□□ -0.99
HDAC4-208ENST00000463007 NOP10Q9NPE3 64 aaKnown RBP8.89□□□□□ -0.99
HDAC4-208ENST00000463007 SLPIP03973 132 aa8.88□□□□□ -0.99
HDAC4-208ENST00000463007 RNASE1P07998 156 aaKnown RBP8.88□□□□□ -0.99
HDAC4-208ENST00000463007 KRTAP1-1Q07627 177 aa8.88□□□□□ -0.99
HDAC4-208ENST00000463007 WFDC10AQ9H1F0 79 aa8.88□□□□□ -0.99
HDAC4-208ENST00000463007 SMIM1B2RUZ4 78 aa8.88□□□□□ -0.99
HDAC4-208ENST00000463007 COX7A2LO14548 114 aa8.88□□□□□ -0.99
HDAC4-208ENST00000463007 MRPL23Q16540 153 aaKnown RBP8.88□□□□□ -0.99
HDAC4-208ENST00000463007 IGKV3D-7A0A0C4DH55 119 aa8.87□□□□□ -0.99
HDAC4-208ENST00000463007 INSP01308 110 aa8.87□□□□□ -0.99
HDAC4-208ENST00000463007 STHQ8IWL8 128 aa8.87□□□□□ -0.99
HDAC4-208ENST00000463007 MIR7-3HGQ8N6C7 128 aa8.87□□□□□ -0.99
HDAC4-208ENST00000463007 TRGV2A0A075B6R0 118 aa8.87□□□□□ -0.99
HDAC4-208ENST00000463007 HERVK_113P63121 156 aa8.87□□□□□ -0.99
HDAC4-208ENST00000463007 C9orf153Q5TBE3 101 aa8.87□□□□□ -0.99
HDAC4-208ENST00000463007 NTM-AS1Q6ZSK4 140 aa8.87□□□□□ -0.99
HDAC4-208ENST00000463007 RPL35AP18077 110 aaKnown RBP8.87□□□□□ -0.99
HDAC4-208ENST00000463007 TIRAPP58753 221 aa8.87□□□□□ -0.99
HDAC4-208ENST00000463007 CLPSL2Q6UWE3 100 aa8.87□□□□□ -0.99
HDAC4-208ENST00000463007 SDIM1Q6ZPB5 146 aa8.87□□□□□ -0.99
HDAC4-208ENST00000463007 C14orf132Q9NPU4 83 aa8.87□□□□□ -0.99
HDAC4-208ENST00000463007 RPL36AP83881 106 aaKnown RBP8.86□□□□□ -0.99
HDAC4-208ENST00000463007 C5orf38Q86SI9 138 aa8.86□□□□□ -0.99
HDAC4-208ENST00000463007 C11orf72Q8NBR9 251 aa8.86□□□□□ -0.99
HDAC4-208ENST00000463007 WFDC11Q8NEX6 87 aa8.86□□□□□ -0.99
HDAC4-208ENST00000463007 RPL36ALQ969Q0 106 aaKnown RBP8.86□□□□□ -0.99
HDAC4-208ENST00000463007 C9orf129Q5T035 196 aaKnown RBP8.86□□□□□ -0.99
HDAC4-208ENST00000463007 DNAL4O96015 105 aa8.85□□□□□ -0.99
HDAC4-208ENST00000463007 ESM1Q9NQ30 184 aa8.85□□□□□ -0.99
HDAC4-208ENST00000463007 KMT2BQ9UMN6 2715 aaPredicted RBP8.85□□□□□ -0.99
HDAC4-208ENST00000463007 A0A096LPF7 62 aa8.84□□□□□ -0.99
HDAC4-208ENST00000463007 DNAJC9-AS1A6NH13 148 aa8.84□□□□□ -0.99
HDAC4-208ENST00000463007 CRPP02741 224 aa8.84□□□□□ -0.99
HDAC4-208ENST00000463007 DEFB114Q30KQ6 69 aa8.84□□□□□ -0.99
HDAC4-208ENST00000463007 Q6Q795 121 aa8.84□□□□□ -0.99
HDAC4-208ENST00000463007 PAX4O43316 350 aa8.84□□□□□ -0.99
HDAC4-208ENST00000463007 SND1-IT1Q9HBX3 110 aa8.83□□□□□ -1
HDAC4-208ENST00000463007 PEMTQ9UBM1 199 aa8.83□□□□□ -1
HDAC4-208ENST00000463007 A0A087WYN8 130 aa8.83□□□□□ -1
HDAC4-208ENST00000463007 LOC107984640A0A0U1RRK4 108 aa8.83□□□□□ -1
HDAC4-208ENST00000463007 LINC00337Q8N6G1 96 aa8.83□□□□□ -1
HDAC4-208ENST00000463007 A0A087WVE0 104 aa8.83□□□□□ -1
HDAC4-208ENST00000463007 C1orf158Q8N1D5 194 aa8.82□□□□□ -1
HDAC4-208ENST00000463007 NCR3O14931 201 aa8.81□□□□□ -1
HDAC4-208ENST00000463007 LECT2O14960 151 aa8.81□□□□□ -1
HDAC4-208ENST00000463007 ODF3L2Q3SX64 289 aa8.81□□□□□ -1
HDAC4-208ENST00000463007 K7EQD1 137 aa8.81□□□□□ -1
HDAC4-208ENST00000463007 PRR3P79522 188 aaKnown RBP8.81□□□□□ -1
HDAC4-208ENST00000463007 CDC42SE2Q9NRR3 84 aa8.81□□□□□ -1
HDAC4-208ENST00000463007 TRGV4A0A0C4DH28 118 aa8.8□□□□□ -1
HDAC4-208ENST00000463007 IL17DQ8TAD2 202 aa8.8□□□□□ -1
HDAC4-208ENST00000463007 IGLV5-39A0A0G2JS06 123 aa8.8□□□□□ -1
HDAC4-208ENST00000463007 TIMM17BO60830 172 aa8.8□□□□□ -1
HDAC4-208ENST00000463007 DEFB130BP0DP73 79 aa8.8□□□□□ -1
HDAC4-208ENST00000463007 DEFB130AP0DP74 79 aa8.8□□□□□ -1
HDAC4-208ENST00000463007 ITPR2Q14571 2701 aa8.8□□□□□ -1
HDAC4-208ENST00000463007 IGLV4-60A0A075B6I1 120 aa8.79□□□□□ -1
HDAC4-208ENST00000463007 MALP21145 153 aa8.79□□□□□ -1
HDAC4-208ENST00000463007 HIST2H2BCQ6DN03 193 aa8.79□□□□□ -1
HDAC4-208ENST00000463007 SMIM11BQ8TCY0 68 aa8.79□□□□□ -1
HDAC4-208ENST00000463007 TMEM243Q9BU79 118 aa8.79□□□□□ -1
HDAC4-208ENST00000463007 FAM240AA0A1B0GVK7 77 aa8.79□□□□□ -1
HDAC4-208ENST00000463007 BEAN1Q3B7T3 259 aa8.79□□□□□ -1
HDAC4-208ENST00000463007 VWFP04275 2813 aa8.79□□□□□ -1
HDAC4-208ENST00000463007 HIST1H4AP62805 103 aaKnown RBP8.79□□□□□ -1
HDAC4-208ENST00000463007 WFDC9Q8NEX5 89 aa8.79□□□□□ -1
HDAC4-208ENST00000463007 DNAJC30Q96LL9 226 aa8.79□□□□□ -1
HDAC4-208ENST00000463007 XCL1P47992 114 aa8.78□□□□□ -1
HDAC4-208ENST00000463007 LINC00643Q86TS7 51 aa8.78□□□□□ -1
HDAC4-208ENST00000463007 TRAV25A0A0B4J276 109 aa8.78□□□□□ -1
HDAC4-208ENST00000463007 COX7B2Q8TF08 81 aa8.78□□□□□ -1
HDAC4-208ENST00000463007 C16orf95Q9H693 158 aa8.78□□□□□ -1
HDAC4-208ENST00000463007 IGLV5-45A0A087WSX0 123 aa8.77□□□□□ -1
HDAC4-208ENST00000463007 TRBV7-7A0A0K0K1E9 115 aa8.77□□□□□ -1
HDAC4-208ENST00000463007 hADV29S1A0JD25 119 aa8.77□□□□□ -1
HDAC4-208ENST00000463007 F5H768 121 aa8.77□□□□□ -1
HDAC4-208ENST00000463007 IGKV2-28A0A075B6P5 120 aa8.77□□□□□ -1.01
HDAC4-208ENST00000463007 IGKV2D-28P01615 120 aa8.77□□□□□ -1.01
HDAC4-208ENST00000463007 C22orf24Q9Y442 160 aa8.77□□□□□ -1.01
HDAC4-208ENST00000463007 CCL18P55774 89 aa8.76□□□□□ -1.01
HDAC4-208ENST00000463007 C6orf226Q5I0X4 101 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms