RNA–Protein interactions for RNA: ENST00000459997.1

SRM-202, Transcript of spermidine synthase, humanhuman

TSL 5

Gene SRM, Length 731 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-202ENST00000459997 RHEBQ15382 184 aa13.16□□□□□ -0.3
SRM-202ENST00000459997 LINC00474Q9P2X8 69 aa13.16□□□□□ -0.3
SRM-202ENST00000459997 LAMTOR2Q9Y2Q5 125 aa13.16□□□□□ -0.3
SRM-202ENST00000459997 S100PP25815 95 aa13.15□□□□□ -0.3
SRM-202ENST00000459997 KIAA1644Q3SXP7 199 aa13.15□□□□□ -0.3
SRM-202ENST00000459997 FAM104AQ969W3 186 aa13.15□□□□□ -0.3
SRM-202ENST00000459997 MAP1LC3AQ9H492 121 aa13.15□□□□□ -0.3
SRM-202ENST00000459997 IGLV4-69A0A075B6H9 119 aa13.14□□□□□ -0.31
SRM-202ENST00000459997 Q6ZRU5 148 aa13.14□□□□□ -0.31
SRM-202ENST00000459997 OPRPNQ99935 248 aaPredicted RBP13.14□□□□□ -0.31
SRM-202ENST00000459997 RAB5AP20339 215 aa13.13□□□□□ -0.31
SRM-202ENST00000459997 SERTAD4-AS1Q5TG53 156 aa13.13□□□□□ -0.31
SRM-202ENST00000459997 APOC3P02656 99 aa13.12□□□□□ -0.31
SRM-202ENST00000459997 C5orf38Q86SI9 138 aa13.12□□□□□ -0.31
SRM-202ENST00000459997 Q8N8P6 123 aa13.12□□□□□ -0.31
SRM-202ENST00000459997 SPANXA1Q9NS26 97 aa13.11□□□□□ -0.31
SRM-202ENST00000459997 CAMK2N2Q96S95 79 aa13.1□□□□□ -0.31
SRM-202ENST00000459997 GNB1LQ9BYB4 327 aa13.1□□□□□ -0.31
SRM-202ENST00000459997 APOMO95445 188 aa13.09□□□□□ -0.31
SRM-202ENST00000459997 PRR3P79522 188 aaKnown RBP13.09□□□□□ -0.31
SRM-202ENST00000459997 LOC107984640A0A0U1RRK4 108 aa13.08□□□□□ -0.32
SRM-202ENST00000459997 IFI27P40305 119 aaPredicted RBP13.08□□□□□ -0.32
SRM-202ENST00000459997 PTTG1IPP53801 180 aa13.08□□□□□ -0.32
SRM-202ENST00000459997 MRPS36P82909 103 aaKnown RBP13.08□□□□□ -0.32
SRM-202ENST00000459997 SPAG11BQ08648 103 aa13.07□□□□□ -0.32
SRM-202ENST00000459997 GAGE2BQ13066 116 aa13.07□□□□□ -0.32
SRM-202ENST00000459997 C2orf48Q96LS8 159 aa13.07□□□□□ -0.32
SRM-202ENST00000459997 TGIF2-C20orf24A0A0A6YYL0 155 aa13.06□□□□□ -0.32
SRM-202ENST00000459997 IFITM10A6NMD0 228 aa13.06□□□□□ -0.32
SRM-202ENST00000459997 NDUFA5Q16718 116 aa13.06□□□□□ -0.32
SRM-202ENST00000459997 SVBPQ8N300 66 aa13.06□□□□□ -0.32
SRM-202ENST00000459997 SNAPINO95295 136 aa13.05□□□□□ -0.32
SRM-202ENST00000459997 MT1HL1P0DM35 61 aa13.05□□□□□ -0.32
SRM-202ENST00000459997 C2orf66Q6UXQ4 117 aa13.05□□□□□ -0.32
SRM-202ENST00000459997 OR10D4PQ8NGN7 298 aa13.05□□□□□ -0.32
SRM-202ENST00000459997 ALKBH7Q9BT30 221 aaPredicted RBP13.05□□□□□ -0.32
SRM-202ENST00000459997 MRPL18Q9H0U6 180 aaKnown RBP13.05□□□□□ -0.32
SRM-202ENST00000459997 NXT2Q9NPJ8 142 aaKnown RBP13.05□□□□□ -0.32
SRM-202ENST00000459997 IGLV4-3A0A075B6K6 122 aa13.04□□□□□ -0.32
SRM-202ENST00000459997 ORAOV1Q8WV07 137 aa13.04□□□□□ -0.32
SRM-202ENST00000459997 PYGO1Q9Y3Y4 419 aa13.04□□□□□ -0.32
SRM-202ENST00000459997 IGHV3OR16-9A0A0B4J2B5 98 aa13.03□□□□□ -0.32
SRM-202ENST00000459997 FABP9Q0Z7S8 132 aa13.03□□□□□ -0.32
SRM-202ENST00000459997 COX19Q49B96 90 aa13.03□□□□□ -0.32
SRM-202ENST00000459997 ORMDL2Q53FV1 153 aa13.03□□□□□ -0.32
SRM-202ENST00000459997 CYSLTR1Q9Y271 337 aa13.03□□□□□ -0.32
SRM-202ENST00000459997 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.02□□□□□ -0.33
SRM-202ENST00000459997 MT-ND6P03923 174 aa13.02□□□□□ -0.33
SRM-202ENST00000459997 RPL18AQ02543 176 aaKnown RBP13.02□□□□□ -0.33
SRM-202ENST00000459997 A0A0J9YXV3 536 aa13.01□□□□□ -0.33
SRM-202ENST00000459997 ZC2HC1BQ5TFG8 222 aa13.01□□□□□ -0.33
SRM-202ENST00000459997 PLA2G2DQ9UNK4 145 aa13.01□□□□□ -0.33
SRM-202ENST00000459997 HMCN2Q8NDA2 5059 aa13.01□□□□□ -0.33
SRM-202ENST00000459997 K7EMI3 77 aa13□□□□□ -0.33
SRM-202ENST00000459997 SLC7A5P1Q8MH63 180 aa13□□□□□ -0.33
SRM-202ENST00000459997 TMEM141Q96I45 108 aa13□□□□□ -0.33
SRM-202ENST00000459997 RNF151Q2KHN1 245 aa12.99□□□□□ -0.33
SRM-202ENST00000459997 A0A1W2PNN7 141 aa12.98□□□□□ -0.33
SRM-202ENST00000459997 IGIPA6NJ69 53 aa12.98□□□□□ -0.33
SRM-202ENST00000459997 Q6ZRP5 223 aa12.98□□□□□ -0.33
SRM-202ENST00000459997 LINC00173Q6ZV60 143 aa12.98□□□□□ -0.33
SRM-202ENST00000459997 MRPL35Q9NZE8 188 aaKnown RBP12.98□□□□□ -0.33
SRM-202ENST00000459997 F8WDY8 70 aa12.97□□□□□ -0.33
SRM-202ENST00000459997 NDUFA1O15239 70 aa12.97□□□□□ -0.33
SRM-202ENST00000459997 TRAPPC1Q9Y5R8 145 aa12.97□□□□□ -0.33
SRM-202ENST00000459997 C9orf116Q5BN46 136 aaPredicted RBP12.96□□□□□ -0.33
SRM-202ENST00000459997 LINC00242Q5T6M2 205 aa12.96□□□□□ -0.33
SRM-202ENST00000459997 TEX43Q6ZNM6 134 aa12.96□□□□□ -0.33
SRM-202ENST00000459997 TOMM6Q96B49 74 aa12.96□□□□□ -0.33
SRM-202ENST00000459997 YPEL4Q96NS1 127 aa12.96□□□□□ -0.33
SRM-202ENST00000459997 A0A087WZ39 114 aa12.95□□□□□ -0.34
SRM-202ENST00000459997 LINC01546A6NGU7 62 aa12.95□□□□□ -0.34
SRM-202ENST00000459997 C10orf25Q5T742 122 aa12.95□□□□□ -0.34
SRM-202ENST00000459997 SPINK6Q6UWN8 80 aa12.95□□□□□ -0.34
SRM-202ENST00000459997 AMELXQ99217 191 aa12.95□□□□□ -0.34
SRM-202ENST00000459997 UBE2D1P51668 147 aa12.94□□□□□ -0.34
SRM-202ENST00000459997 UNQ6190/PRO20217Q6UXQ8 127 aa12.94□□□□□ -0.34
SRM-202ENST00000459997 Q6ZN92 141 aa12.93□□□□□ -0.34
SRM-202ENST00000459997 LINC01600Q96MT4 127 aa12.93□□□□□ -0.34
SRM-202ENST00000459997 C2orf88Q9BSF0 95 aa12.93□□□□□ -0.34
SRM-202ENST00000459997 VCX2Q9H322 139 aa12.93□□□□□ -0.34
SRM-202ENST00000459997 NPSP0C0P6 89 aa12.92□□□□□ -0.34
SRM-202ENST00000459997 FA2HQ7L5A8 372 aa12.92□□□□□ -0.34
SRM-202ENST00000459997 CBLN2Q8IUK8 224 aa12.92□□□□□ -0.34
SRM-202ENST00000459997 C6orf48Q9UBA6 75 aa12.92□□□□□ -0.34
SRM-202ENST00000459997 G0S2P27469 103 aa12.91□□□□□ -0.34
SRM-202ENST00000459997 C18orf32Q8TCD1 76 aa12.91□□□□□ -0.34
SRM-202ENST00000459997 URB1-AS1Q96HZ7 61 aa12.91□□□□□ -0.34
SRM-202ENST00000459997 SCGB3A1Q96QR1 104 aa12.91□□□□□ -0.34
SRM-202ENST00000459997 TIMM17AQ99595 171 aa12.91□□□□□ -0.34
SRM-202ENST00000459997 SRSF9Q13242 221 aaKnown RBP eCLIP12.9□□□□□ -0.34
SRM-202ENST00000459997 KIAA0087Q14695 138 aa12.9□□□□□ -0.34
SRM-202ENST00000459997 REG3GQ6UW15 175 aa12.9□□□□□ -0.34
SRM-202ENST00000459997 PHF5AQ7RTV0 110 aaKnown RBP12.9□□□□□ -0.34
SRM-202ENST00000459997 TLX1NBP0CAT3 122 aa12.89□□□□□ -0.35
SRM-202ENST00000459997 ERASQ7Z444 233 aa12.89□□□□□ -0.35
SRM-202ENST00000459997 SMCO4Q9NRQ5 59 aa12.89□□□□□ -0.35
SRM-202ENST00000459997 PSORS1C2Q9UIG4 136 aa12.89□□□□□ -0.35
SRM-202ENST00000459997 C2orf82Q6UX34 121 aa12.87□□□□□ -0.35
SRM-202ENST00000459997 FAM168BA1KXE4 195 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms