RNA–Protein interactions for RNA: ENST00000459004.1

SCARNA18-201, small Cajal body-specific RNA 18, humanhuman

BASIC

Gene SCARNA18, Length 134 nt, Biotype snoRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA18-201ENST00000459004 ZMYM4Q5VZL5 1548 aa-0.84□□□□□ -2.54
SCARNA18-201ENST00000459004 TRBV20-1A0A075B6N2 111 aa-0.84□□□□□ -2.54
SCARNA18-201ENST00000459004 LOC730098B7Z3J9 87 aa-0.84□□□□□ -2.54
SCARNA18-201ENST00000459004 DEFB136Q30KP8 78 aa-0.84□□□□□ -2.54
SCARNA18-201ENST00000459004 SPANXN1Q5VSR9 72 aa-0.84□□□□□ -2.54
SCARNA18-201ENST00000459004 VSTM2AQ8TAG5 236 aa-0.84□□□□□ -2.54
SCARNA18-201ENST00000459004 DEFB104AQ8WTQ1 72 aa-0.84□□□□□ -2.54
SCARNA18-201ENST00000459004 LINC00472Q9H8W2 130 aa-0.84□□□□□ -2.54
SCARNA18-201ENST00000459004 SPANXCQ9NY87 97 aa-0.84□□□□□ -2.54
SCARNA18-201ENST00000459004 MARF1Q9Y4F3 1742 aaKnown RBP-0.84□□□□□ -2.54
SCARNA18-201ENST00000459004 A0A087WVE0 104 aa-0.85□□□□□ -2.55
SCARNA18-201ENST00000459004 SPAG11AQ6PDA7 123 aa-0.85□□□□□ -2.55
SCARNA18-201ENST00000459004 CLPSL2Q6UWE3 100 aa-0.85□□□□□ -2.55
SCARNA18-201ENST00000459004 COX6B2Q6YFQ2 88 aa-0.85□□□□□ -2.55
SCARNA18-201ENST00000459004 Q8IZM0 81 aa-0.85□□□□□ -2.55
SCARNA18-201ENST00000459004 WFDC9Q8NEX5 89 aa-0.85□□□□□ -2.55
SCARNA18-201ENST00000459004 LRRC37A3O60309 1634 aa-0.86□□□□□ -2.55
SCARNA18-201ENST00000459004 ATP10BO94823 1461 aa-0.86□□□□□ -2.55
SCARNA18-201ENST00000459004 ANKRD50Q9ULJ7 1429 aa-0.86□□□□□ -2.55
SCARNA18-201ENST00000459004 LYNX1G3V0Z9 82 aa-0.86□□□□□ -2.55
SCARNA18-201ENST00000459004 SSSCA1O60232 199 aa-0.86□□□□□ -2.55
SCARNA18-201ENST00000459004 UBE2D1P51668 147 aa-0.86□□□□□ -2.55
SCARNA18-201ENST00000459004 DEFB110Q30KQ9 67 aa-0.86□□□□□ -2.55
SCARNA18-201ENST00000459004 CCDC153Q494R4 210 aa-0.86□□□□□ -2.55
SCARNA18-201ENST00000459004 C9orf116Q5BN46 136 aaPredicted RBP-0.86□□□□□ -2.55
SCARNA18-201ENST00000459004 C10orf82Q8WW14 230 aa-0.86□□□□□ -2.55
SCARNA18-201ENST00000459004 LINC01600Q96MT4 127 aa-0.86□□□□□ -2.55
SCARNA18-201ENST00000459004 RPRMQ9NS64 109 aa-0.86□□□□□ -2.55
SCARNA18-201ENST00000459004 TULP4Q9NRJ4 1543 aa-0.86□□□□□ -2.55
SCARNA18-201ENST00000459004 LRP6O75581 1613 aa-0.86□□□□□ -2.55
SCARNA18-201ENST00000459004 ALKQ9UM73 1620 aa-0.86□□□□□ -2.55
SCARNA18-201ENST00000459004 MED14O60244 1454 aa-0.86□□□□□ -2.55
SCARNA18-201ENST00000459004 MAGI2Q86UL8 1455 aa-0.86□□□□□ -2.55
SCARNA18-201ENST00000459004 PLXNC1O60486 1568 aa-0.87□□□□□ -2.55
SCARNA18-201ENST00000459004 ZNF236Q9UL36 1845 aa-0.87□□□□□ -2.55
SCARNA18-201ENST00000459004 TNRC6CQ9HCJ0 1690 aaKnown RBP-0.87□□□□□ -2.55
SCARNA18-201ENST00000459004 SLIT1O75093 1534 aa-0.87□□□□□ -2.55
SCARNA18-201ENST00000459004 CLPSL1A2RUU4 121 aa-0.87□□□□□ -2.55
SCARNA18-201ENST00000459004 NCS1P62166 190 aa-0.87□□□□□ -2.55
SCARNA18-201ENST00000459004 DPH3Q96FX2 82 aa-0.87□□□□□ -2.55
SCARNA18-201ENST00000459004 TP53AIP1Q9HCN2 124 aa-0.87□□□□□ -2.55
SCARNA18-201ENST00000459004 SAR1AQ9NR31 198 aa-0.87□□□□□ -2.55
SCARNA18-201ENST00000459004 CRIPTQ9P021 101 aa-0.87□□□□□ -2.55
SCARNA18-201ENST00000459004 SPCS1Q9Y6A9 102 aa-0.87□□□□□ -2.55
SCARNA18-201ENST00000459004 PAPPAQ13219 1627 aa-0.87□□□□□ -2.55
SCARNA18-201ENST00000459004 PHLPP1O60346 1717 aa-0.87□□□□□ -2.55
SCARNA18-201ENST00000459004 ZC3H13Q5T200 1668 aaKnown RBP-0.88□□□□□ -2.55
SCARNA18-201ENST00000459004 PIK3C2BO00750 1634 aa-0.88□□□□□ -2.55
SCARNA18-201ENST00000459004 APOC4-APOC2K7ER74 178 aa-0.88□□□□□ -2.55
SCARNA18-201ENST00000459004 IFNA17P01571 189 aa-0.88□□□□□ -2.55
SCARNA18-201ENST00000459004 DBIP07108 87 aaKnown RBP-0.88□□□□□ -2.55
SCARNA18-201ENST00000459004 PIRTP0C851 137 aa-0.88□□□□□ -2.55
SCARNA18-201ENST00000459004 SMIM6P0DI80 62 aa-0.88□□□□□ -2.55
SCARNA18-201ENST00000459004 MORN2Q502X0 79 aa-0.88□□□□□ -2.55
SCARNA18-201ENST00000459004 RPL7L1Q6DKI1 246 aaKnown RBP-0.88□□□□□ -2.55
SCARNA18-201ENST00000459004 BAGE3Q86Y29 109 aa-0.88□□□□□ -2.55
SCARNA18-201ENST00000459004 SPANXA1Q9NS26 97 aa-0.88□□□□□ -2.55
SCARNA18-201ENST00000459004 PLXNB2O15031 1838 aa-0.88□□□□□ -2.55
SCARNA18-201ENST00000459004 WNK3Q9BYP7 1800 aa-0.88□□□□□ -2.55
SCARNA18-201ENST00000459004 KDM5AP29375 1690 aaKnown RBP-0.88□□□□□ -2.55
SCARNA18-201ENST00000459004 ZNF831Q5JPB2 1677 aa-0.88□□□□□ -2.55
SCARNA18-201ENST00000459004 KDM3BQ7LBC6 1761 aa-0.88□□□□□ -2.55
SCARNA18-201ENST00000459004 NCOA3Q9Y6Q9 1424 aa-0.89□□□□□ -2.55
SCARNA18-201ENST00000459004 PRDM15P57071 1507 aaPredicted RBP-0.89□□□□□ -2.55
SCARNA18-201ENST00000459004 NRXN3Q9Y4C0 1643 aa-0.89□□□□□ -2.55
SCARNA18-201ENST00000459004 C20orf202A1L168 122 aa-0.89□□□□□ -2.55
SCARNA18-201ENST00000459004 NBEAP1P0C6P0 100 aa-0.89□□□□□ -2.55
SCARNA18-201ENST00000459004 NEFHP12036 1026 aa-0.89□□□□□ -2.55
SCARNA18-201ENST00000459004 MIC13Q5XKP0 118 aa-0.89□□□□□ -2.55
SCARNA18-201ENST00000459004 SELENOSQ9BQE4 189 aa-0.89□□□□□ -2.55
SCARNA18-201ENST00000459004 C1orf167Q5SNV9 1468 aa-0.89□□□□□ -2.55
SCARNA18-201ENST00000459004 MYH13Q9UKX3 1938 aa-0.89□□□□□ -2.55
SCARNA18-201ENST00000459004 DAPK1P53355 1430 aa-0.89□□□□□ -2.55
SCARNA18-201ENST00000459004 MAST1Q9Y2H9 1570 aa-0.9□□□□□ -2.55
SCARNA18-201ENST00000459004 FAM92AA1XBS5 289 aa-0.9□□□□□ -2.55
SCARNA18-201ENST00000459004 S100A5P33763 92 aa-0.9□□□□□ -2.55
SCARNA18-201ENST00000459004 PRLHP81277 87 aa-0.9□□□□□ -2.55
SCARNA18-201ENST00000459004 CFAP126Q5VTH2 177 aa-0.9□□□□□ -2.55
SCARNA18-201ENST00000459004 MYO7BQ6PIF6 2116 aa-0.9□□□□□ -2.55
SCARNA18-201ENST00000459004 C9orf62Q8N4C0 152 aa-0.9□□□□□ -2.55
SCARNA18-201ENST00000459004 MMGT1Q8N4V1 131 aa-0.9□□□□□ -2.55
SCARNA18-201ENST00000459004 SCN3BQ9NY72 215 aa-0.9□□□□□ -2.55
SCARNA18-201ENST00000459004 C10orf71Q711Q0 1435 aa-0.9□□□□□ -2.55
SCARNA18-201ENST00000459004 ADGRL2O95490 1459 aa-0.91□□□□□ -2.55
SCARNA18-201ENST00000459004 ERVK-7P63135 1459 aa-0.91□□□□□ -2.55
SCARNA18-201ENST00000459004 ABCC10Q5T3U5 1492 aa-0.91□□□□□ -2.55
SCARNA18-201ENST00000459004 A6NIN4 97 aa-0.91□□□□□ -2.56
SCARNA18-201ENST00000459004 NPFFO15130 113 aa-0.91□□□□□ -2.56
SCARNA18-201ENST00000459004 SPRR1BP22528 89 aa-0.91□□□□□ -2.56
SCARNA18-201ENST00000459004 ZNF818PQ6ZRF7 136 aa-0.91□□□□□ -2.56
SCARNA18-201ENST00000459004 GOLGA4Q13439 2230 aaKnown RBP-0.91□□□□□ -2.56
SCARNA18-201ENST00000459004 DISP2A7MBM2 1401 aa-0.91□□□□□ -2.56
SCARNA18-201ENST00000459004 EEA1Q15075 1411 aa-0.91□□□□□ -2.56
SCARNA18-201ENST00000459004 GRIN2AQ12879 1464 aa-0.92□□□□□ -2.56
SCARNA18-201ENST00000459004 BCORQ6W2J9 1755 aa-0.92□□□□□ -2.56
SCARNA18-201ENST00000459004 CLASP1Q7Z460 1538 aa-0.92□□□□□ -2.56
SCARNA18-201ENST00000459004 GNG14A0A1W2PPG7 69 aa-0.92□□□□□ -2.56
SCARNA18-201ENST00000459004 LINC01546A6NGU7 62 aa-0.92□□□□□ -2.56
SCARNA18-201ENST00000459004 H0YGG7 62 aa-0.92□□□□□ -2.56
SCARNA18-201ENST00000459004 UBE2G1P62253 170 aa-0.92□□□□□ -2.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms