RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 HMCN2Q8NDA2 5059 aa9.42□□□□□ -0.9
USP39-206ENST00000448971 MALP21145 153 aa9.42□□□□□ -0.9
USP39-206ENST00000448971 C9orf163Q8N9P6 203 aa9.42□□□□□ -0.9
USP39-206ENST00000448971 OPRPNQ99935 248 aaPredicted RBP9.42□□□□□ -0.9
USP39-206ENST00000448971 CYSLTR1Q9Y271 337 aa9.42□□□□□ -0.9
USP39-206ENST00000448971 LRP1Q07954 4544 aaKnown RBP9.42□□□□□ -0.9
USP39-206ENST00000448971 GVQW2A0A096LPI5 108 aaPredicted RBP9.41□□□□□ -0.9
USP39-206ENST00000448971 IGHV1-58A0A0C4DH39 117 aa9.41□□□□□ -0.9
USP39-206ENST00000448971 KRTAP29-1A8MX34 341 aaPredicted RBP9.41□□□□□ -0.9
USP39-206ENST00000448971 K7EMI3 77 aa9.41□□□□□ -0.9
USP39-206ENST00000448971 MRPS36P82909 103 aaKnown RBP9.41□□□□□ -0.9
USP39-206ENST00000448971 C2orf66Q6UXQ4 117 aa9.41□□□□□ -0.9
USP39-206ENST00000448971 SCXQ7RTU7 201 aa9.41□□□□□ -0.9
USP39-206ENST00000448971 TGIF2-C20orf24A0A0A6YYL0 155 aa9.4□□□□□ -0.9
USP39-206ENST00000448971 COX7A2LO14548 114 aa9.4□□□□□ -0.9
USP39-206ENST00000448971 FABP9Q0Z7S8 132 aa9.4□□□□□ -0.9
USP39-206ENST00000448971 IGHV3-64A0A075B6Q5 118 aa9.39□□□□□ -0.91
USP39-206ENST00000448971 Q6ZN92 141 aa9.39□□□□□ -0.91
USP39-206ENST00000448971 PRSS3P2Q8NHM4 247 aa9.39□□□□□ -0.91
USP39-206ENST00000448971 TMEM141Q96I45 108 aa9.39□□□□□ -0.91
USP39-206ENST00000448971 PYGO1Q9Y3Y4 419 aa9.39□□□□□ -0.91
USP39-206ENST00000448971 IGLV4-3A0A075B6K6 122 aa9.38□□□□□ -0.91
USP39-206ENST00000448971 ZNF561-AS1K7EIQ3 104 aa9.38□□□□□ -0.91
USP39-206ENST00000448971 TEX43Q6ZNM6 134 aa9.38□□□□□ -0.91
USP39-206ENST00000448971 ALKBH7Q9BT30 221 aaPredicted RBP9.38□□□□□ -0.91
USP39-206ENST00000448971 CHAC1Q9BUX1 264 aa9.38□□□□□ -0.91
USP39-206ENST00000448971 SLPIP03973 132 aa9.37□□□□□ -0.91
USP39-206ENST00000448971 C5orf38Q86SI9 138 aa9.37□□□□□ -0.91
USP39-206ENST00000448971 FAM104AQ969W3 186 aa9.37□□□□□ -0.91
USP39-206ENST00000448971 LINC00526Q96FQ7 95 aa9.37□□□□□ -0.91
USP39-206ENST00000448971 C2orf88Q9BSF0 95 aa9.37□□□□□ -0.91
USP39-206ENST00000448971 TRAPPC1Q9Y5R8 145 aa9.37□□□□□ -0.91
USP39-206ENST00000448971 APOMO95445 188 aa9.36□□□□□ -0.91
USP39-206ENST00000448971 G0S2P27469 103 aa9.36□□□□□ -0.91
USP39-206ENST00000448971 CARD19Q96LW7 228 aa9.36□□□□□ -0.91
USP39-206ENST00000448971 SMCO4Q9NRQ5 59 aa9.36□□□□□ -0.91
USP39-206ENST00000448971 PLA2G1BP04054 148 aaKnown RBP9.35□□□□□ -0.91
USP39-206ENST00000448971 FA2HQ7L5A8 372 aa9.35□□□□□ -0.91
USP39-206ENST00000448971 CIRBP-AS1Q8TBR5 109 aa9.35□□□□□ -0.91
USP39-206ENST00000448971 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.35□□□□□ -0.91
USP39-206ENST00000448971 SPAG11BQ08648 103 aa9.34□□□□□ -0.91
USP39-206ENST00000448971 SDIM1Q6ZPB5 146 aa9.34□□□□□ -0.91
USP39-206ENST00000448971 FAT3Q8TDW7 4589 aa9.34□□□□□ -0.91
USP39-206ENST00000448971 IGLV4-69A0A075B6H9 119 aa9.33□□□□□ -0.92
USP39-206ENST00000448971 NPSP0C0P6 89 aa9.33□□□□□ -0.92
USP39-206ENST00000448971 PAPPA-AS1Q5QFB9 102 aa9.33□□□□□ -0.92
USP39-206ENST00000448971 ORAOV1Q8WV07 137 aa9.33□□□□□ -0.92
USP39-206ENST00000448971 TOMM6Q96B49 74 aa9.33□□□□□ -0.92
USP39-206ENST00000448971 TIMM17AQ99595 171 aa9.33□□□□□ -0.92
USP39-206ENST00000448971 VCX2Q9H322 139 aa9.33□□□□□ -0.92
USP39-206ENST00000448971 PKIGQ9Y2B9 76 aa9.33□□□□□ -0.92
USP39-206ENST00000448971 IGHV3OR16-9A0A0B4J2B5 98 aa9.32□□□□□ -0.92
USP39-206ENST00000448971 PANO1I0J062 215 aa9.32□□□□□ -0.92
USP39-206ENST00000448971 CHTF8P0CG12 524 aa9.32□□□□□ -0.92
USP39-206ENST00000448971 COX6A2Q02221 97 aa9.32□□□□□ -0.92
USP39-206ENST00000448971 SYCNQ0VAF6 134 aa9.32□□□□□ -0.92
USP39-206ENST00000448971 ZC2HC1BQ5TFG8 222 aa9.32□□□□□ -0.92
USP39-206ENST00000448971 SERTAD4-AS1Q5TG53 156 aa9.32□□□□□ -0.92
USP39-206ENST00000448971 CBLN2Q8IUK8 224 aa9.32□□□□□ -0.92
USP39-206ENST00000448971 SLC7A5P1Q8MH63 180 aa9.32□□□□□ -0.92
USP39-206ENST00000448971 OR10D4PQ8NGN7 298 aa9.32□□□□□ -0.92
USP39-206ENST00000448971 CAMK2N2Q96S95 79 aa9.32□□□□□ -0.92
USP39-206ENST00000448971 IGKV2-24A0A0C4DH68 120 aa9.31□□□□□ -0.92
USP39-206ENST00000448971 IGIPA6NJ69 53 aa9.31□□□□□ -0.92
USP39-206ENST00000448971 UBE2D1P51668 147 aa9.31□□□□□ -0.92
USP39-206ENST00000448971 KRTAP10-4P60372 401 aaPredicted RBP9.31□□□□□ -0.92
USP39-206ENST00000448971 LINC00242Q5T6M2 205 aa9.31□□□□□ -0.92
USP39-206ENST00000448971 LINC00173Q6ZV60 143 aa9.31□□□□□ -0.92
USP39-206ENST00000448971 DPH3Q96FX2 82 aa9.31□□□□□ -0.92
USP39-206ENST00000448971 SCGB3A1Q96QR1 104 aa9.31□□□□□ -0.92
USP39-206ENST00000448971 LINC01549A6NIU2 74 aa9.3□□□□□ -0.92
USP39-206ENST00000448971 C18orf32Q8TCD1 76 aa9.3□□□□□ -0.92
USP39-206ENST00000448971 SPACA4Q8TDM5 124 aa9.3□□□□□ -0.92
USP39-206ENST00000448971 AMELXQ99217 191 aa9.3□□□□□ -0.92
USP39-206ENST00000448971 LINC01546A6NGU7 62 aa9.29□□□□□ -0.92
USP39-206ENST00000448971 Q6ZRU5 148 aa9.29□□□□□ -0.92
USP39-206ENST00000448971 ERASQ7Z444 233 aa9.29□□□□□ -0.92
USP39-206ENST00000448971 C2orf48Q96LS8 159 aa9.29□□□□□ -0.92
USP39-206ENST00000448971 CIRBPQ14011 172 aaKnown RBP9.28□□□□□ -0.92
USP39-206ENST00000448971 MAJINQ3KP22 176 aa9.28□□□□□ -0.92
USP39-206ENST00000448971 YPEL4Q96NS1 127 aa9.28□□□□□ -0.92
USP39-206ENST00000448971 A0A087WZ39 114 aa9.27□□□□□ -0.93
USP39-206ENST00000448971 A0A096LNI7 61 aa9.27□□□□□ -0.93
USP39-206ENST00000448971 SEC11AP67812 179 aa9.27□□□□□ -0.93
USP39-206ENST00000448971 A0A087WYN8 130 aa9.26□□□□□ -0.93
USP39-206ENST00000448971 NDUFA1O15239 70 aa9.26□□□□□ -0.93
USP39-206ENST00000448971 HERVK_113P63121 156 aa9.26□□□□□ -0.93
USP39-206ENST00000448971 GEMIN7Q9H840 131 aaKnown RBP9.26□□□□□ -0.93
USP39-206ENST00000448971 LOC107984640A0A0U1RRK4 108 aa9.25□□□□□ -0.93
USP39-206ENST00000448971 OXTP01178 125 aa9.25□□□□□ -0.93
USP39-206ENST00000448971 HBDP02042 147 aa9.25□□□□□ -0.93
USP39-206ENST00000448971 LINC00614P0C842 121 aa9.25□□□□□ -0.93
USP39-206ENST00000448971 RAB5BP61020 215 aa9.25□□□□□ -0.93
USP39-206ENST00000448971 RPL18AQ02543 176 aaKnown RBP9.25□□□□□ -0.93
USP39-206ENST00000448971 PACRGQ96M98 296 aaPredicted RBP9.25□□□□□ -0.93
USP39-206ENST00000448971 LINC00474Q9P2X8 69 aa9.25□□□□□ -0.93
USP39-206ENST00000448971 PKHD1L1Q86WI1 4243 aa9.25□□□□□ -0.93
USP39-206ENST00000448971 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.24□□□□□ -0.93
USP39-206ENST00000448971 RPL37AP61513 92 aaKnown RBP9.24□□□□□ -0.93
USP39-206ENST00000448971 GAGE2BQ13066 116 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 188.7 ms