RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 A0A0G2JMM0 328 aa1.91□□□□□ -2.1
HMGB1P48-201ENST00000446155 TRBV6-4A0A1B0GX49 114 aa1.91□□□□□ -2.1
HMGB1P48-201ENST00000446155 A0A1W2PPB8 328 aa1.91□□□□□ -2.1
HMGB1P48-201ENST00000446155 KIR3DP1A8MWS1 328 aa1.91□□□□□ -2.1
HMGB1P48-201ENST00000446155 H3BRM9 83 aa1.91□□□□□ -2.1
HMGB1P48-201ENST00000446155 M0R2P5 195 aa1.91□□□□□ -2.1
HMGB1P48-201ENST00000446155 PYYP10082 97 aa1.91□□□□□ -2.1
HMGB1P48-201ENST00000446155 GUCA1AP43080 201 aaPredicted RBP1.91□□□□□ -2.1
HMGB1P48-201ENST00000446155 PCOTHQ58A44 107 aa1.91□□□□□ -2.1
HMGB1P48-201ENST00000446155 CCDC167Q9P0B6 97 aa1.91□□□□□ -2.1
HMGB1P48-201ENST00000446155 MUC4Q99102 2169 aa1.91□□□□□ -2.1
HMGB1P48-201ENST00000446155 USF3Q68DE3 2245 aa1.9□□□□□ -2.1
HMGB1P48-201ENST00000446155 BBIP1A8MTZ0 92 aa1.9□□□□□ -2.11
HMGB1P48-201ENST00000446155 NUPR1O60356 82 aa1.9□□□□□ -2.11
HMGB1P48-201ENST00000446155 IGF2P01344 180 aa1.9□□□□□ -2.11
HMGB1P48-201ENST00000446155 IGHV3-33P01772 117 aa1.9□□□□□ -2.11
HMGB1P48-201ENST00000446155 ATP11AUNQ6ZP68 121 aa1.9□□□□□ -2.11
HMGB1P48-201ENST00000446155 ATP6V0E2Q8NHE4 81 aa1.9□□□□□ -2.11
HMGB1P48-201ENST00000446155 MED9Q9NWA0 146 aa1.9□□□□□ -2.11
HMGB1P48-201ENST00000446155 CHD3Q12873 2000 aaKnown RBP1.9□□□□□ -2.11
HMGB1P48-201ENST00000446155 HERC1Q15751 4861 aa1.89□□□□□ -2.11
HMGB1P48-201ENST00000446155 TNFP01375 233 aa1.89□□□□□ -2.11
HMGB1P48-201ENST00000446155 SCIMPQ6UWF3 145 aa1.89□□□□□ -2.11
HMGB1P48-201ENST00000446155 SNX29P2Q8IUI4 249 aa1.89□□□□□ -2.11
HMGB1P48-201ENST00000446155 TMEM203Q969S6 136 aa1.89□□□□□ -2.11
HMGB1P48-201ENST00000446155 NOP16Q9Y3C1 178 aaKnown RBP1.89□□□□□ -2.11
HMGB1P48-201ENST00000446155 CADP27708 2225 aa1.89□□□□□ -2.11
HMGB1P48-201ENST00000446155 NCOA6Q14686 2063 aaPredicted RBP1.88□□□□□ -2.11
HMGB1P48-201ENST00000446155 KRTAP12-1P59990 96 aa1.88□□□□□ -2.11
HMGB1P48-201ENST00000446155 KRTAP12-3P60328 96 aa1.88□□□□□ -2.11
HMGB1P48-201ENST00000446155 WHAMMP3Q1A5X7 153 aa1.88□□□□□ -2.11
HMGB1P48-201ENST00000446155 MPV17LQ2QL34 196 aa1.88□□□□□ -2.11
HMGB1P48-201ENST00000446155 IDO2Q6ZQW0 420 aa1.88□□□□□ -2.11
HMGB1P48-201ENST00000446155 KCNRGQ8N5I3 272 aa1.88□□□□□ -2.11
HMGB1P48-201ENST00000446155 TCTEX1D1Q8N7M0 179 aa1.88□□□□□ -2.11
HMGB1P48-201ENST00000446155 DPH3Q96FX2 82 aa1.88□□□□□ -2.11
HMGB1P48-201ENST00000446155 SNURFQ9Y675 71 aa1.88□□□□□ -2.11
HMGB1P48-201ENST00000446155 A0A1W2PRS3 328 aa1.87□□□□□ -2.11
HMGB1P48-201ENST00000446155 PITX3O75364 302 aa1.87□□□□□ -2.11
HMGB1P48-201ENST00000446155 IFNGP01579 166 aa1.87□□□□□ -2.11
HMGB1P48-201ENST00000446155 ADCYAP1P18509 176 aa1.87□□□□□ -2.11
HMGB1P48-201ENST00000446155 S100A1P23297 94 aa1.87□□□□□ -2.11
HMGB1P48-201ENST00000446155 MIC13Q5XKP0 118 aa1.87□□□□□ -2.11
HMGB1P48-201ENST00000446155 Q6ZUT4 128 aa1.87□□□□□ -2.11
HMGB1P48-201ENST00000446155 SLC25A26Q70HW3 274 aa1.87□□□□□ -2.11
HMGB1P48-201ENST00000446155 ZNF563Q8TA94 476 aa1.87□□□□□ -2.11
HMGB1P48-201ENST00000446155 PSMG3Q9BT73 122 aaPredicted RBP1.87□□□□□ -2.11
HMGB1P48-201ENST00000446155 DNAH9Q9NYC9 4486 aa1.87□□□□□ -2.11
HMGB1P48-201ENST00000446155 CITO14578 2027 aa1.86□□□□□ -2.11
HMGB1P48-201ENST00000446155 TRAV17A0A0B4J275 112 aa1.86□□□□□ -2.11
HMGB1P48-201ENST00000446155 MIF4GDA9UHW6 222 aaKnown RBP1.86□□□□□ -2.11
HMGB1P48-201ENST00000446155 J3QLW9 94 aa1.86□□□□□ -2.11
HMGB1P48-201ENST00000446155 M0R2N4 97 aa1.86□□□□□ -2.11
HMGB1P48-201ENST00000446155 GEMIN2O14893 280 aaKnown RBP1.86□□□□□ -2.11
HMGB1P48-201ENST00000446155 INE1O15225 51 aa1.86□□□□□ -2.11
HMGB1P48-201ENST00000446155 CCL25O15444 150 aa1.86□□□□□ -2.11
HMGB1P48-201ENST00000446155 KLF7O75840 302 aaPredicted RBP1.86□□□□□ -2.11
HMGB1P48-201ENST00000446155 KRTAP12-4P60329 112 aa1.86□□□□□ -2.11
HMGB1P48-201ENST00000446155 LINC01545Q5VT33 79 aa1.86□□□□□ -2.11
HMGB1P48-201ENST00000446155 C3orf62Q6ZUJ4 267 aa1.86□□□□□ -2.11
HMGB1P48-201ENST00000446155 ZNF436-AS1Q8NC38 126 aaPredicted RBP1.86□□□□□ -2.11
HMGB1P48-201ENST00000446155 TAS2R8Q9NYW2 309 aa1.86□□□□□ -2.11
HMGB1P48-201ENST00000446155 CR1P17927 2039 aa1.86□□□□□ -2.11
HMGB1P48-201ENST00000446155 SRRM2Q9UQ35 2752 aaKnown RBP1.86□□□□□ -2.11
HMGB1P48-201ENST00000446155 KIAA1109Q2LD37 5005 aa1.85□□□□□ -2.11
HMGB1P48-201ENST00000446155 TRAV12-2A0A075B6T6 113 aa1.85□□□□□ -2.11
HMGB1P48-201ENST00000446155 LOC110117498A0A087WWA1 95 aa1.85□□□□□ -2.11
HMGB1P48-201ENST00000446155 DNAL4O96015 105 aa1.85□□□□□ -2.11
HMGB1P48-201ENST00000446155 ZNF25P17030 456 aaPredicted RBP1.85□□□□□ -2.11
HMGB1P48-201ENST00000446155 S100PP25815 95 aa1.85□□□□□ -2.11
HMGB1P48-201ENST00000446155 MEIG1Q5JSS6 88 aa1.85□□□□□ -2.11
HMGB1P48-201ENST00000446155 UNQ6190/PRO20217Q6UXQ8 127 aa1.85□□□□□ -2.11
HMGB1P48-201ENST00000446155 GNG8Q9UK08 70 aa1.85□□□□□ -2.11
HMGB1P48-201ENST00000446155 ZFP30Q9Y2G7 519 aa1.85□□□□□ -2.11
HMGB1P48-201ENST00000446155 ARFGEF3Q5TH69 2177 aa1.84□□□□□ -2.11
HMGB1P48-201ENST00000446155 LOC100130705A0A1B0GUX0 176 aa1.84□□□□□ -2.11
HMGB1P48-201ENST00000446155 STATHP02808 62 aa1.84□□□□□ -2.11
HMGB1P48-201ENST00000446155 FGF7P21781 194 aa1.84□□□□□ -2.11
HMGB1P48-201ENST00000446155 RHOHQ15669 191 aa1.84□□□□□ -2.11
HMGB1P48-201ENST00000446155 OCIAD2Q56VL3 154 aa1.84□□□□□ -2.11
HMGB1P48-201ENST00000446155 C6orf52Q5T4I8 152 aa1.84□□□□□ -2.11
HMGB1P48-201ENST00000446155 LINC00299Q6ZSB3 139 aa1.84□□□□□ -2.11
HMGB1P48-201ENST00000446155 VSTM2AQ8TAG5 236 aa1.84□□□□□ -2.11
HMGB1P48-201ENST00000446155 DYNLRB2Q8TF09 96 aa1.84□□□□□ -2.11
HMGB1P48-201ENST00000446155 PDCD10Q9BUL8 212 aa1.84□□□□□ -2.11
HMGB1P48-201ENST00000446155 CYSTM1Q9H1C7 97 aa1.84□□□□□ -2.11
HMGB1P48-201ENST00000446155 TMEM14CQ9P0S9 112 aa1.84□□□□□ -2.11
HMGB1P48-201ENST00000446155 ABCA13Q86UQ4 5058 aa1.84□□□□□ -2.12
HMGB1P48-201ENST00000446155 EXPH5Q8NEV8 1989 aa1.83□□□□□ -2.12
HMGB1P48-201ENST00000446155 PLCE1Q9P212 2302 aa1.83□□□□□ -2.12
HMGB1P48-201ENST00000446155 NINQ8N4C6 2090 aa1.83□□□□□ -2.12
HMGB1P48-201ENST00000446155 TRAV2A0A0B4J234 112 aa1.83□□□□□ -2.12
HMGB1P48-201ENST00000446155 A0A0J9YY99 117 aa1.83□□□□□ -2.12
HMGB1P48-201ENST00000446155 JMJD7-PLA2G4BH0Y9G9 81 aa1.83□□□□□ -2.12
HMGB1P48-201ENST00000446155 PPYP01298 95 aa1.83□□□□□ -2.12
HMGB1P48-201ENST00000446155 SPRNQ5BIV9 151 aa1.83□□□□□ -2.12
HMGB1P48-201ENST00000446155 LINC00322Q6ZN03 302 aaPredicted RBP1.83□□□□□ -2.12
HMGB1P48-201ENST00000446155 CCL19Q99731 98 aa1.83□□□□□ -2.12
HMGB1P48-201ENST00000446155 SNRNP25Q9BV90 132 aaKnown RBP1.83□□□□□ -2.12
HMGB1P48-201ENST00000446155 LYSTQ99698 3801 aa1.82□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms