RNA–Protein interactions for RNA: ENST00000444415.7

TRAF4-205, Transcript of TNF receptor associated factor 4, humanhuman

TSL 5 BASIC

Gene TRAF4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-205ENST00000444415 SPACA4Q8TDM5 124 aa13.89□□□□□ -0.19
TRAF4-205ENST00000444415 ALKBH7Q9BT30 221 aaPredicted RBP13.89□□□□□ -0.19
TRAF4-205ENST00000444415 NXT2Q9NPJ8 142 aaKnown RBP13.89□□□□□ -0.19
TRAF4-205ENST00000444415 ORMDL2Q53FV1 153 aa13.88□□□□□ -0.19
TRAF4-205ENST00000444415 CYSLTR1Q9Y271 337 aa13.88□□□□□ -0.19
TRAF4-205ENST00000444415 TGIF2-C20orf24A0A0A6YYL0 155 aa13.87□□□□□ -0.19
TRAF4-205ENST00000444415 IGIPA6NJ69 53 aa13.87□□□□□ -0.19
TRAF4-205ENST00000444415 K7EMI3 77 aa13.87□□□□□ -0.19
TRAF4-205ENST00000444415 IGLV4-69A0A075B6H9 119 aa13.87□□□□□ -0.19
TRAF4-205ENST00000444415 TMEM141Q96I45 108 aa13.87□□□□□ -0.19
TRAF4-205ENST00000444415 MRPL18Q9H0U6 180 aaKnown RBP13.87□□□□□ -0.19
TRAF4-205ENST00000444415 MALP21145 153 aa13.86□□□□□ -0.19
TRAF4-205ENST00000444415 LINC00242Q5T6M2 205 aa13.85□□□□□ -0.19
TRAF4-205ENST00000444415 CARD19Q96LW7 228 aa13.85□□□□□ -0.19
TRAF4-205ENST00000444415 AMELXQ99217 191 aa13.85□□□□□ -0.19
TRAF4-205ENST00000444415 A0A087WYN8 130 aa13.84□□□□□ -0.19
TRAF4-205ENST00000444415 A0A096LNI7 61 aa13.84□□□□□ -0.19
TRAF4-205ENST00000444415 LINC01546A6NGU7 62 aa13.84□□□□□ -0.19
TRAF4-205ENST00000444415 ZNF561-AS1K7EIQ3 104 aa13.84□□□□□ -0.19
TRAF4-205ENST00000444415 MT-ND6P03923 174 aa13.84□□□□□ -0.19
TRAF4-205ENST00000444415 COX19Q49B96 90 aa13.84□□□□□ -0.19
TRAF4-205ENST00000444415 Q6ZRU5 148 aa13.84□□□□□ -0.19
TRAF4-205ENST00000444415 SVBPQ8N300 66 aa13.84□□□□□ -0.19
TRAF4-205ENST00000444415 PLA2G1BP04054 148 aaKnown RBP13.83□□□□□ -0.2
TRAF4-205ENST00000444415 UBE2D1P51668 147 aa13.83□□□□□ -0.2
TRAF4-205ENST00000444415 SYCNQ0VAF6 134 aa13.83□□□□□ -0.2
TRAF4-205ENST00000444415 SNAPINO95295 136 aa13.82□□□□□ -0.2
TRAF4-205ENST00000444415 TOMM6Q96B49 74 aa13.82□□□□□ -0.2
TRAF4-205ENST00000444415 YPEL4Q96NS1 127 aa13.82□□□□□ -0.2
TRAF4-205ENST00000444415 FABP9Q0Z7S8 132 aa13.81□□□□□ -0.2
TRAF4-205ENST00000444415 TEX43Q6ZNM6 134 aa13.81□□□□□ -0.2
TRAF4-205ENST00000444415 IGKV2-24A0A0C4DH68 120 aa13.8□□□□□ -0.2
TRAF4-205ENST00000444415 SPAG11BQ08648 103 aa13.8□□□□□ -0.2
TRAF4-205ENST00000444415 PLAC8Q9NZF1 115 aa13.8□□□□□ -0.2
TRAF4-205ENST00000444415 NPSP0C0P6 89 aa13.8□□□□□ -0.2
TRAF4-205ENST00000444415 C2orf48Q96LS8 159 aa13.8□□□□□ -0.2
TRAF4-205ENST00000444415 A0A087WZ39 114 aa13.79□□□□□ -0.2
TRAF4-205ENST00000444415 NDUFA5Q16718 116 aa13.79□□□□□ -0.2
TRAF4-205ENST00000444415 OR10D4PQ8NGN7 298 aa13.79□□□□□ -0.2
TRAF4-205ENST00000444415 ORAOV1Q8WV07 137 aa13.79□□□□□ -0.2
TRAF4-205ENST00000444415 URB1-AS1Q96HZ7 61 aa13.79□□□□□ -0.2
TRAF4-205ENST00000444415 TIMM17AQ99595 171 aa13.79□□□□□ -0.2
TRAF4-205ENST00000444415 APOMO95445 188 aa13.78□□□□□ -0.2
TRAF4-205ENST00000444415 DMBT1Q9UGM3 2413 aaPredicted RBP13.78□□□□□ -0.2
TRAF4-205ENST00000444415 MAJINQ3KP22 176 aa13.77□□□□□ -0.21
TRAF4-205ENST00000444415 FAM19A3Q7Z5A8 133 aa13.77□□□□□ -0.21
TRAF4-205ENST00000444415 CAMK2N2Q96S95 79 aa13.77□□□□□ -0.21
TRAF4-205ENST00000444415 HNRNPA3P51991 378 aaKnown RBP13.76□□□□□ -0.21
TRAF4-205ENST00000444415 KIAA0087Q14695 138 aa13.76□□□□□ -0.21
TRAF4-205ENST00000444415 Q6ZN92 141 aa13.76□□□□□ -0.21
TRAF4-205ENST00000444415 VCX2Q9H322 139 aa13.76□□□□□ -0.21
TRAF4-205ENST00000444415 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.75□□□□□ -0.21
TRAF4-205ENST00000444415 C2orf88Q9BSF0 95 aa13.75□□□□□ -0.21
TRAF4-205ENST00000444415 TRAPPC1Q9Y5R8 145 aa13.75□□□□□ -0.21
TRAF4-205ENST00000444415 A0A096LNJ9 63 aa13.74□□□□□ -0.21
TRAF4-205ENST00000444415 RPL37AP61513 92 aaKnown RBP13.74□□□□□ -0.21
TRAF4-205ENST00000444415 C10orf25Q5T742 122 aa13.74□□□□□ -0.21
TRAF4-205ENST00000444415 ERASQ7Z444 233 aa13.74□□□□□ -0.21
TRAF4-205ENST00000444415 C18orf32Q8TCD1 76 aa13.74□□□□□ -0.21
TRAF4-205ENST00000444415 A0A0J9YXV3 536 aa13.74□□□□□ -0.21
TRAF4-205ENST00000444415 SLC7A5P1Q8MH63 180 aa13.74□□□□□ -0.21
TRAF4-205ENST00000444415 STPG4Q8N801 248 aa13.74□□□□□ -0.21
TRAF4-205ENST00000444415 DPH3Q96FX2 82 aa13.74□□□□□ -0.21
TRAF4-205ENST00000444415 PTTG1IPP53801 180 aa13.73□□□□□ -0.21
TRAF4-205ENST00000444415 G0S2P27469 103 aa13.72□□□□□ -0.21
TRAF4-205ENST00000444415 SCGB3A1Q96QR1 104 aa13.72□□□□□ -0.21
TRAF4-205ENST00000444415 UNQ6190/PRO20217Q6UXQ8 127 aa13.71□□□□□ -0.21
TRAF4-205ENST00000444415 FA2HQ7L5A8 372 aa13.71□□□□□ -0.21
TRAF4-205ENST00000444415 CBLN2Q8IUK8 224 aa13.71□□□□□ -0.21
TRAF4-205ENST00000444415 MRPL35Q9NZE8 188 aaKnown RBP13.71□□□□□ -0.21
TRAF4-205ENST00000444415 LOC107984640A0A0U1RRK4 108 aa13.7□□□□□ -0.22
TRAF4-205ENST00000444415 RNF151Q2KHN1 245 aa13.7□□□□□ -0.22
TRAF4-205ENST00000444415 LINC01561Q8N1V8 128 aa13.7□□□□□ -0.22
TRAF4-205ENST00000444415 C6orf48Q9UBA6 75 aa13.7□□□□□ -0.22
TRAF4-205ENST00000444415 GAGE2BQ13066 116 aa13.68□□□□□ -0.22
TRAF4-205ENST00000444415 PAPPA-AS1Q5QFB9 102 aa13.68□□□□□ -0.22
TRAF4-205ENST00000444415 CDKN2A-AS1Q9UH64 79 aa13.68□□□□□ -0.22
TRAF4-205ENST00000444415 NDUFA1O15239 70 aa13.67□□□□□ -0.22
TRAF4-205ENST00000444415 C2orf82Q6UX34 121 aa13.67□□□□□ -0.22
TRAF4-205ENST00000444415 SMCO4Q9NRQ5 59 aa13.67□□□□□ -0.22
TRAF4-205ENST00000444415 LINC00474Q9P2X8 69 aa13.67□□□□□ -0.22
TRAF4-205ENST00000444415 PKIGQ9Y2B9 76 aa13.67□□□□□ -0.22
TRAF4-205ENST00000444415 F8WDY8 70 aa13.67□□□□□ -0.22
TRAF4-205ENST00000444415 A0A1W2PNN7 141 aa13.66□□□□□ -0.22
TRAF4-205ENST00000444415 HERVK_113P63121 156 aa13.66□□□□□ -0.22
TRAF4-205ENST00000444415 LINC01549A6NIU2 74 aa13.65□□□□□ -0.22
TRAF4-205ENST00000444415 LINC00614P0C842 121 aa13.65□□□□□ -0.22
TRAF4-205ENST00000444415 RPL18AQ02543 176 aaKnown RBP13.65□□□□□ -0.22
TRAF4-205ENST00000444415 PMCHL1Q16048 86 aa13.65□□□□□ -0.22
TRAF4-205ENST00000444415 CST9LQ9H4G1 147 aa13.65□□□□□ -0.22
TRAF4-205ENST00000444415 TNXBP22105 4242 aa13.65□□□□□ -0.23
TRAF4-205ENST00000444415 Q6ZRP5 223 aa13.64□□□□□ -0.23
TRAF4-205ENST00000444415 IGLV5-45A0A087WSX0 123 aa13.63□□□□□ -0.23
TRAF4-205ENST00000444415 TLX1NBP0CAT3 122 aa13.63□□□□□ -0.23
TRAF4-205ENST00000444415 TINCRA0A1B0GVN0 87 aa13.61□□□□□ -0.23
TRAF4-205ENST00000444415 KRTAP29-1A8MX34 341 aaPredicted RBP13.61□□□□□ -0.23
TRAF4-205ENST00000444415 SEC11AP67812 179 aa13.61□□□□□ -0.23
TRAF4-205ENST00000444415 SMIM1B2RUZ4 78 aa13.61□□□□□ -0.23
TRAF4-205ENST00000444415 PMVKQ15126 192 aa13.61□□□□□ -0.23
TRAF4-205ENST00000444415 C9orf116Q5BN46 136 aaPredicted RBP13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 172.8 ms