RNA–Protein interactions for RNA: ENST00000429738.1

MRPL28-203, Transcript of mitochondrial ribosomal protein L28, human

TSL 2 BASIC

Gene MRPL28, Length 310 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL28-203	ENST00000429738	CAMK2N2	Q96S95	79 aa		11.04	□□□□□ -0.64
MRPL28-203	ENST00000429738	OPRPN	Q99935	248 aa	Predicted RBP	11.04	□□□□□ -0.64
MRPL28-203	ENST00000429738	IGHV3OR16-9	A0A0B4J2B5	98 aa		11.03	□□□□□ -0.64
MRPL28-203	ENST00000429738	APOM	O95445	188 aa		11.03	□□□□□ -0.64
MRPL28-203	ENST00000429738	TMEM136	Q6ZRR5	245 aa		11.03	□□□□□ -0.64
MRPL28-203	ENST00000429738	PRSS47	A8MTI9	375 aa		11.02	□□□□□ -0.65
MRPL28-203	ENST00000429738	PNRC1	Q12796	327 aa	Predicted RBP	11.02	□□□□□ -0.65
MRPL28-203	ENST00000429738	OR10D4P	Q8NGN7	298 aa		11.02	□□□□□ -0.65
MRPL28-203	ENST00000429738	BORCS8-MEF2B	H3BNR1	382 aa	Predicted RBP	11.01	□□□□□ -0.65
MRPL28-203	ENST00000429738	SPAG11B	Q08648	103 aa		11.01	□□□□□ -0.65
MRPL28-203	ENST00000429738	RNF151	Q2KHN1	245 aa		11.01	□□□□□ -0.65
MRPL28-203	ENST00000429738	LINC01600	Q96MT4	127 aa		11.01	□□□□□ -0.65
MRPL28-203	ENST00000429738	PRELID3A	Q96N28	172 aa		11.01	□□□□□ -0.65
MRPL28-203	ENST00000429738	GAGE2B	Q13066	116 aa		11	□□□□□ -0.65
MRPL28-203	ENST00000429738	ANAPC16	Q96DE5	110 aa		11	□□□□□ -0.65
MRPL28-203	ENST00000429738	PYGO1	Q9Y3Y4	419 aa		11	□□□□□ -0.65
MRPL28-203	ENST00000429738		A0A1W2PNN7	141 aa		10.99	□□□□□ -0.65
MRPL28-203	ENST00000429738	LAMTOR2	Q9Y2Q5	125 aa		10.99	□□□□□ -0.65
MRPL28-203	ENST00000429738	IFITM10	A6NMD0	228 aa		10.98	□□□□□ -0.65
MRPL28-203	ENST00000429738		F8WDY8	70 aa		10.98	□□□□□ -0.65
MRPL28-203	ENST00000429738	RAB5A	P20339	215 aa		10.98	□□□□□ -0.65
MRPL28-203	ENST00000429738	IFI27	P40305	119 aa	Predicted RBP	10.98	□□□□□ -0.65
MRPL28-203	ENST00000429738	SPINK6	Q6UWN8	80 aa		10.98	□□□□□ -0.65
MRPL28-203	ENST00000429738		Q6ZRP5	223 aa		10.98	□□□□□ -0.65
MRPL28-203	ENST00000429738	MRPL35	Q9NZE8	188 aa	Known RBP	10.98	□□□□□ -0.65
MRPL28-203	ENST00000429738	IGLV4-3	A0A075B6K6	122 aa		10.97	□□□□□ -0.65
MRPL28-203	ENST00000429738	SRSF9	Q13242	221 aa	Known RBP eCLIP	10.97	□□□□□ -0.65
MRPL28-203	ENST00000429738	ORAOV1	Q8WV07	137 aa		10.97	□□□□□ -0.65
MRPL28-203	ENST00000429738	MT-ND4L	P03901	98 aa		10.96	□□□□□ -0.65
MRPL28-203	ENST00000429738	C9orf116	Q5BN46	136 aa	Predicted RBP	10.96	□□□□□ -0.65
MRPL28-203	ENST00000429738		A0A0J9YXV3	536 aa		10.95	□□□□□ -0.66
MRPL28-203	ENST00000429738	RPL18A	Q02543	176 aa	Known RBP	10.95	□□□□□ -0.66
MRPL28-203	ENST00000429738	LINC00242	Q5T6M2	205 aa		10.95	□□□□□ -0.66
MRPL28-203	ENST00000429738	MAP1LC3A	Q9H492	121 aa		10.95	□□□□□ -0.66
MRPL28-203	ENST00000429738		A0A087WZ39	114 aa		10.94	□□□□□ -0.66
MRPL28-203	ENST00000429738	LOC389332	A0A1B0GUA5	103 aa		10.94	□□□□□ -0.66
MRPL28-203	ENST00000429738	NDUFA1	O15239	70 aa		10.94	□□□□□ -0.66
MRPL28-203	ENST00000429738	ODF1	Q14990	250 aa		10.94	□□□□□ -0.66
MRPL28-203	ENST00000429738		Q8N8P6	123 aa		10.94	□□□□□ -0.66
MRPL28-203	ENST00000429738	TMEM141	Q96I45	108 aa		10.94	□□□□□ -0.66
MRPL28-203	ENST00000429738	TGIF2-C20orf24	A0A0A6YYL0	155 aa		10.93	□□□□□ -0.66
MRPL28-203	ENST00000429738	TLX1NB	P0CAT3	122 aa		10.93	□□□□□ -0.66
MRPL28-203	ENST00000429738	KIAA0087	Q14695	138 aa		10.93	□□□□□ -0.66
MRPL28-203	ENST00000429738	C10orf25	Q5T742	122 aa		10.93	□□□□□ -0.66
MRPL28-203	ENST00000429738	COMMD7	Q86VX2	200 aa		10.93	□□□□□ -0.66
MRPL28-203	ENST00000429738	KRTAP10-8	P60410	259 aa		10.92	□□□□□ -0.66
MRPL28-203	ENST00000429738	UNQ6190/PRO20217	Q6UXQ8	127 aa		10.92	□□□□□ -0.66
MRPL28-203	ENST00000429738	IMMP2L	Q96T52	175 aa		10.92	□□□□□ -0.66
MRPL28-203	ENST00000429738	C6orf48	Q9UBA6	75 aa		10.92	□□□□□ -0.66
MRPL28-203	ENST00000429738	UBE2D1	P51668	147 aa		10.91	□□□□□ -0.66
MRPL28-203	ENST00000429738	UQCC3	Q6UW78	93 aa		10.91	□□□□□ -0.66
MRPL28-203	ENST00000429738	C2orf66	Q6UXQ4	117 aa		10.91	□□□□□ -0.66
MRPL28-203	ENST00000429738	TEX43	Q6ZNM6	134 aa		10.91	□□□□□ -0.66
MRPL28-203	ENST00000429738	LINC00173	Q6ZV60	143 aa		10.91	□□□□□ -0.66
MRPL28-203	ENST00000429738	AMELX	Q99217	191 aa		10.91	□□□□□ -0.66
MRPL28-203	ENST00000429738	CYSLTR1	Q9Y271	337 aa		10.91	□□□□□ -0.66
MRPL28-203	ENST00000429738		K7EMI3	77 aa		10.9	□□□□□ -0.66
MRPL28-203	ENST00000429738	REG3G	Q6UW15	175 aa		10.9	□□□□□ -0.66
MRPL28-203	ENST00000429738	PHF5A	Q7RTV0	110 aa	Known RBP	10.9	□□□□□ -0.66
MRPL28-203	ENST00000429738	LINC01561	Q8N1V8	128 aa		10.9	□□□□□ -0.66
MRPL28-203	ENST00000429738	PSORS1C2	Q9UIG4	136 aa		10.9	□□□□□ -0.66
MRPL28-203	ENST00000429738	TMEM218	A2RU14	115 aa		10.89	□□□□□ -0.67
MRPL28-203	ENST00000429738	NPS	P0C0P6	89 aa		10.89	□□□□□ -0.67
MRPL28-203	ENST00000429738	ADCYAP1	P18509	176 aa		10.89	□□□□□ -0.67
MRPL28-203	ENST00000429738	ORMDL2	Q53FV1	153 aa		10.89	□□□□□ -0.67
MRPL28-203	ENST00000429738	IGIP	A6NJ69	53 aa		10.88	□□□□□ -0.67
MRPL28-203	ENST00000429738	FAM19A3	Q7Z5A8	133 aa		10.88	□□□□□ -0.67
MRPL28-203	ENST00000429738	ZC2HC1B	Q5TFG8	222 aa		10.87	□□□□□ -0.67
MRPL28-203	ENST00000429738	C2orf88	Q9BSF0	95 aa		10.87	□□□□□ -0.67
MRPL28-203	ENST00000429738	TRBV30	A0A0K0K1B3	111 aa		10.86	□□□□□ -0.67
MRPL28-203	ENST00000429738	FAM168B	A1KXE4	195 aa		10.86	□□□□□ -0.67
MRPL28-203	ENST00000429738		Q6ZN92	141 aa		10.86	□□□□□ -0.67
MRPL28-203	ENST00000429738	CTDSP1	Q9GZU7	261 aa		10.86	□□□□□ -0.67
MRPL28-203	ENST00000429738	NXT2	Q9NPJ8	142 aa	Known RBP	10.86	□□□□□ -0.67
MRPL28-203	ENST00000429738	MT-ND6	P03923	174 aa		10.85	□□□□□ -0.67
MRPL28-203	ENST00000429738	VCX2	Q9H322	139 aa		10.85	□□□□□ -0.67
MRPL28-203	ENST00000429738	C1orf137	Q5JT78	98 aa		10.84	□□□□□ -0.67
MRPL28-203	ENST00000429738	C2orf82	Q6UX34	121 aa		10.84	□□□□□ -0.67
MRPL28-203	ENST00000429738	KRTAP7-1	Q8IUC3	87 aa		10.84	□□□□□ -0.67
MRPL28-203	ENST00000429738	TRAV9-1	A0A075B6T8	112 aa		10.83	□□□□□ -0.68
MRPL28-203	ENST00000429738	GAGE2E	Q4V326	116 aa		10.83	□□□□□ -0.68
MRPL28-203	ENST00000429738	KRTAP11-1	Q8IUC1	163 aa		10.83	□□□□□ -0.68
MRPL28-203	ENST00000429738	GAGE2D	Q9UEU5	116 aa		10.83	□□□□□ -0.68
MRPL28-203	ENST00000429738	TOMM6	Q96B49	74 aa		10.82	□□□□□ -0.68
MRPL28-203	ENST00000429738	TIMM17A	Q99595	171 aa		10.82	□□□□□ -0.68
MRPL28-203	ENST00000429738	SEC11C	Q9BY50	192 aa		10.82	□□□□□ -0.68
MRPL28-203	ENST00000429738	NDUFC2-KCTD14	E9PQ53	114 aa		10.81	□□□□□ -0.68
MRPL28-203	ENST00000429738	G0S2	P27469	103 aa		10.81	□□□□□ -0.68
MRPL28-203	ENST00000429738	KIAA1644	Q3SXP7	199 aa		10.81	□□□□□ -0.68
MRPL28-203	ENST00000429738	FAM19A5	Q7Z5A7	132 aa	Predicted RBP	10.81	□□□□□ -0.68
MRPL28-203	ENST00000429738	PACRG	Q96M98	296 aa	Predicted RBP	10.81	□□□□□ -0.68
MRPL28-203	ENST00000429738	LPA	P08519	4548 aa		10.8	□□□□□ -0.68
MRPL28-203	ENST00000429738	IGLV7-43	P04211	117 aa		10.8	□□□□□ -0.68
MRPL28-203	ENST00000429738	PAPPA-AS1	Q5QFB9	102 aa		10.8	□□□□□ -0.68
MRPL28-203	ENST00000429738	C9orf129	Q5T035	196 aa	Known RBP	10.8	□□□□□ -0.68
MRPL28-203	ENST00000429738	C10orf91	Q5T1B1	145 aa		10.8	□□□□□ -0.68
MRPL28-203	ENST00000429738	HERVK_113	P63121	156 aa		10.79	□□□□□ -0.68
MRPL28-203	ENST00000429738	SEC11A	P67812	179 aa		10.79	□□□□□ -0.68
MRPL28-203	ENST00000429738		Q8IZM0	81 aa		10.79	□□□□□ -0.68
MRPL28-203	ENST00000429738	LINC01546	A6NGU7	62 aa		10.78	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms