RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 F6UB75 175 aa2.95□□□□□ -1.94
HMGB3P5-201ENST00000428894 H3BT86 120 aa2.95□□□□□ -1.94
HMGB3P5-201ENST00000428894 CST7O76096 145 aa2.95□□□□□ -1.94
HMGB3P5-201ENST00000428894 IL4P05112 153 aa2.95□□□□□ -1.94
HMGB3P5-201ENST00000428894 LGALS3P17931 250 aaKnown RBP2.95□□□□□ -1.94
HMGB3P5-201ENST00000428894 PLGLAQ15195 96 aa2.95□□□□□ -1.94
HMGB3P5-201ENST00000428894 LINC01545Q5VT33 79 aa2.95□□□□□ -1.94
HMGB3P5-201ENST00000428894 Q6ZRU5 148 aa2.95□□□□□ -1.94
HMGB3P5-201ENST00000428894 ATP5L2Q7Z4Y8 100 aa2.95□□□□□ -1.94
HMGB3P5-201ENST00000428894 ZNF645Q8N7E2 425 aa2.95□□□□□ -1.94
HMGB3P5-201ENST00000428894 DYNLRB2Q8TF09 96 aa2.95□□□□□ -1.94
HMGB3P5-201ENST00000428894 USMG5Q96IX5 58 aa2.95□□□□□ -1.94
HMGB3P5-201ENST00000428894 FAM19A4Q96LR4 140 aa2.95□□□□□ -1.94
HMGB3P5-201ENST00000428894 METTL26Q96S19 204 aa2.95□□□□□ -1.94
HMGB3P5-201ENST00000428894 DSCR8Q96T75 97 aa2.95□□□□□ -1.94
HMGB3P5-201ENST00000428894 RNF5Q99942 180 aa2.95□□□□□ -1.94
HMGB3P5-201ENST00000428894 HDHD3Q9BSH5 251 aaPredicted RBP2.95□□□□□ -1.94
HMGB3P5-201ENST00000428894 IL36BQ9NZH7 164 aa2.95□□□□□ -1.94
HMGB3P5-201ENST00000428894 HIGD1BQ9P298 99 aa2.95□□□□□ -1.94
HMGB3P5-201ENST00000428894 EPDR1Q9UM22 224 aa2.95□□□□□ -1.94
HMGB3P5-201ENST00000428894 V9GY05 133 aa2.95□□□□□ -1.94
HMGB3P5-201ENST00000428894 PLAC8L1A1L4L8 177 aa2.94□□□□□ -1.94
HMGB3P5-201ENST00000428894 H3BP45 60 aa2.94□□□□□ -1.94
HMGB3P5-201ENST00000428894 MRPS12O15235 138 aaKnown RBP2.94□□□□□ -1.94
HMGB3P5-201ENST00000428894 SYNGR2O43760 224 aa2.94□□□□□ -1.94
HMGB3P5-201ENST00000428894 NDUFS5O43920 106 aa2.94□□□□□ -1.94
HMGB3P5-201ENST00000428894 NDUFA3O95167 84 aa2.94□□□□□ -1.94
HMGB3P5-201ENST00000428894 HLA-DMBP28068 263 aa2.94□□□□□ -1.94
HMGB3P5-201ENST00000428894 ATP5EP56381 51 aaPredicted RBP2.94□□□□□ -1.94
HMGB3P5-201ENST00000428894 HERVK_113P61574 105 aa2.94□□□□□ -1.94
HMGB3P5-201ENST00000428894 MRPS36P82909 103 aaKnown RBP2.94□□□□□ -1.94
HMGB3P5-201ENST00000428894 DEFB114Q30KQ6 69 aa2.94□□□□□ -1.94
HMGB3P5-201ENST00000428894 LGALS9BQ3B8N2 356 aa2.94□□□□□ -1.94
HMGB3P5-201ENST00000428894 ORMDL2Q53FV1 153 aa2.94□□□□□ -1.94
HMGB3P5-201ENST00000428894 NXT2Q9NPJ8 142 aaKnown RBP2.94□□□□□ -1.94
HMGB3P5-201ENST00000428894 NHP2Q9NX24 153 aaKnown RBP2.94□□□□□ -1.94
HMGB3P5-201ENST00000428894 IGKV1-9A0A0C4DH69 117 aa2.93□□□□□ -1.94
HMGB3P5-201ENST00000428894 IGKV1-12A0A0C4DH73 117 aa2.93□□□□□ -1.94
HMGB3P5-201ENST00000428894 TRBV7-6A0A0J9YX20 115 aa2.93□□□□□ -1.94
HMGB3P5-201ENST00000428894 hADV29S1A0JD25 119 aa2.93□□□□□ -1.94
HMGB3P5-201ENST00000428894 TMEM30CPA0ZSE6 113 aa2.93□□□□□ -1.94
HMGB3P5-201ENST00000428894 H3BVH4 76 aa2.93□□□□□ -1.94
HMGB3P5-201ENST00000428894 UBE2L6O14933 153 aa2.93□□□□□ -1.94
HMGB3P5-201ENST00000428894 LEPROTL1O95214 131 aa2.93□□□□□ -1.94
HMGB3P5-201ENST00000428894 TCL1BO95988 128 aa2.93□□□□□ -1.94
HMGB3P5-201ENST00000428894 IGKV1D-12P01611 117 aa2.93□□□□□ -1.94
HMGB3P5-201ENST00000428894 MGST1P10620 155 aaKnown RBP2.93□□□□□ -1.94
HMGB3P5-201ENST00000428894 GCHFRP30047 84 aa2.93□□□□□ -1.94
HMGB3P5-201ENST00000428894 PSMB2P49721 201 aa2.93□□□□□ -1.94
HMGB3P5-201ENST00000428894 DAD1P61803 113 aa2.93□□□□□ -1.94
HMGB3P5-201ENST00000428894 SNRPD3P62318 126 aaKnown RBP2.93□□□□□ -1.94
HMGB3P5-201ENST00000428894 CCL20P78556 96 aa2.93□□□□□ -1.94
HMGB3P5-201ENST00000428894 LAGE3Q14657 143 aa2.93□□□□□ -1.94
HMGB3P5-201ENST00000428894 PRR4Q16378 134 aa2.93□□□□□ -1.94
HMGB3P5-201ENST00000428894 DEFB135Q30KP9 77 aa2.93□□□□□ -1.94
HMGB3P5-201ENST00000428894 TMEM170BQ5T4T1 132 aa2.93□□□□□ -1.94
HMGB3P5-201ENST00000428894 KTN1-AS1Q86SY8 53 aa2.93□□□□□ -1.94
HMGB3P5-201ENST00000428894 LINC00596Q86U02 117 aa2.93□□□□□ -1.94
HMGB3P5-201ENST00000428894 FAM19A2Q8N3H0 131 aa2.93□□□□□ -1.94
HMGB3P5-201ENST00000428894 CHCHD1Q96BP2 118 aaKnown RBP2.93□□□□□ -1.94
HMGB3P5-201ENST00000428894 WFDC10AQ9H1F0 79 aa2.93□□□□□ -1.94
HMGB3P5-201ENST00000428894 Q9H3A6 140 aa2.93□□□□□ -1.94
HMGB3P5-201ENST00000428894 C11orf68Q9H3H3 251 aaKnown RBP2.93□□□□□ -1.94
HMGB3P5-201ENST00000428894 RBM12B-AS1Q9P1G2 102 aa2.93□□□□□ -1.94
HMGB3P5-201ENST00000428894 APLNQ9ULZ1 77 aa2.93□□□□□ -1.94
HMGB3P5-201ENST00000428894 DMBT1Q9UGM3 2413 aaPredicted RBP2.93□□□□□ -1.94
HMGB3P5-201ENST00000428894 IGHV3-43A0A0B4J1X8 118 aa2.92□□□□□ -1.94
HMGB3P5-201ENST00000428894 IGHV1-58A0A0C4DH39 117 aa2.92□□□□□ -1.94
HMGB3P5-201ENST00000428894 UBE2L5PA0A1B0GUS4 154 aa2.92□□□□□ -1.94
HMGB3P5-201ENST00000428894 C2orf70A6NJV1 201 aa2.92□□□□□ -1.94
HMGB3P5-201ENST00000428894 C16orf90A8MZG2 172 aa2.92□□□□□ -1.94
HMGB3P5-201ENST00000428894 F2Z2F3 143 aa2.92□□□□□ -1.94
HMGB3P5-201ENST00000428894 K7EMT4 169 aa2.92□□□□□ -1.94
HMGB3P5-201ENST00000428894 LGALS9O00182 355 aa2.92□□□□□ -1.94
HMGB3P5-201ENST00000428894 ACYP1P07311 99 aa2.92□□□□□ -1.94
HMGB3P5-201ENST00000428894 IGHV3-43DP0DP04 118 aa2.92□□□□□ -1.94
HMGB3P5-201ENST00000428894 RPL30P62888 115 aaKnown RBP2.92□□□□□ -1.94
HMGB3P5-201ENST00000428894 QRFPP83859 136 aa2.92□□□□□ -1.94
HMGB3P5-201ENST00000428894 INSL4Q14641 139 aa2.92□□□□□ -1.94
HMGB3P5-201ENST00000428894 FXYD3Q14802 87 aa2.92□□□□□ -1.94
HMGB3P5-201ENST00000428894 KISS1Q15726 138 aa2.92□□□□□ -1.94
HMGB3P5-201ENST00000428894 CENPWQ5EE01 88 aa2.92□□□□□ -1.94
HMGB3P5-201ENST00000428894 PVRIGQ6DKI7 326 aa2.92□□□□□ -1.94
HMGB3P5-201ENST00000428894 EBLN2Q6P2I7 272 aa2.92□□□□□ -1.94
HMGB3P5-201ENST00000428894 Q6ZQT7 251 aa2.92□□□□□ -1.94
HMGB3P5-201ENST00000428894 IL1F10Q8WWZ1 152 aa2.92□□□□□ -1.94
HMGB3P5-201ENST00000428894 CHAC1Q9BUX1 264 aa2.92□□□□□ -1.94
HMGB3P5-201ENST00000428894 TTTY10Q9BZA0 68 aa2.92□□□□□ -1.94
HMGB3P5-201ENST00000428894 ANAPC10Q9UM13 185 aa2.92□□□□□ -1.94
HMGB3P5-201ENST00000428894 HHLA3Q9XRX5 114 aa2.92□□□□□ -1.94
HMGB3P5-201ENST00000428894 C8orf87E5RJ46 101 aa2.91□□□□□ -1.94
HMGB3P5-201ENST00000428894 H3BMM0 161 aa2.91□□□□□ -1.94
HMGB3P5-201ENST00000428894 J3QLW9 94 aa2.91□□□□□ -1.94
HMGB3P5-201ENST00000428894 CMC4P56277 68 aaPredicted RBP2.91□□□□□ -1.94
HMGB3P5-201ENST00000428894 RPS11P62280 158 aaKnown RBP eCLIP2.91□□□□□ -1.94
HMGB3P5-201ENST00000428894 RBMY1FQ15415 496 aaKnown RBP2.91□□□□□ -1.94
HMGB3P5-201ENST00000428894 ZNF56Q15929 161 aa2.91□□□□□ -1.94
HMGB3P5-201ENST00000428894 Q6ZS49 121 aa2.91□□□□□ -1.94
HMGB3P5-201ENST00000428894 ZNF833PQ6ZTB9 187 aa2.91□□□□□ -1.94
HMGB3P5-201ENST00000428894 GPHB5Q86YW7 130 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms