RNA–Protein interactions for RNA: ENST00000428555.1

TRIM39-208, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-208ENST00000428555 IGHV1-58A0A0C4DH39 117 aa6.02□□□□□ -1.45
TRIM39-208ENST00000428555 TCAPO15273 167 aa6.02□□□□□ -1.45
TRIM39-208ENST00000428555 PPBPP02775 128 aa6.02□□□□□ -1.45
TRIM39-208ENST00000428555 RPL37AP61513 92 aaKnown RBP6.02□□□□□ -1.45
TRIM39-208ENST00000428555 SMAGPQ0VAQ4 97 aa6.02□□□□□ -1.45
TRIM39-208ENST00000428555 PNRC1Q12796 327 aaPredicted RBP6.02□□□□□ -1.45
TRIM39-208ENST00000428555 VAMP3Q15836 100 aa6.02□□□□□ -1.45
TRIM39-208ENST00000428555 CLLU1Q5K131 121 aa6.02□□□□□ -1.45
TRIM39-208ENST00000428555 ATP5L2Q7Z4Y8 100 aa6.02□□□□□ -1.45
TRIM39-208ENST00000428555 FAM104AQ969W3 186 aa6.02□□□□□ -1.45
TRIM39-208ENST00000428555 TMEM18Q96B42 140 aa6.02□□□□□ -1.45
TRIM39-208ENST00000428555 OPRPNQ99935 248 aaPredicted RBP6.02□□□□□ -1.45
TRIM39-208ENST00000428555 TIMM21Q9BVV7 248 aa6.02□□□□□ -1.45
TRIM39-208ENST00000428555 SMIM2Q9BVW6 85 aa6.02□□□□□ -1.45
TRIM39-208ENST00000428555 PHOX2AO14813 284 aa6.01□□□□□ -1.45
TRIM39-208ENST00000428555 IFITM2Q01629 132 aa6.01□□□□□ -1.45
TRIM39-208ENST00000428555 Q6ZUT4 128 aa6.01□□□□□ -1.45
TRIM39-208ENST00000428555 LINC00518Q8N0U6 118 aa6.01□□□□□ -1.45
TRIM39-208ENST00000428555 ORMDL3Q8N138 153 aa6.01□□□□□ -1.45
TRIM39-208ENST00000428555 SPACA4Q8TDM5 124 aa6.01□□□□□ -1.45
TRIM39-208ENST00000428555 PRELID3AQ96N28 172 aa6.01□□□□□ -1.45
TRIM39-208ENST00000428555 IGKV2-24A0A0C4DH68 120 aa6□□□□□ -1.45
TRIM39-208ENST00000428555 LOC389332A0A1B0GUA5 103 aa6□□□□□ -1.45
TRIM39-208ENST00000428555 KRTAP29-1A8MX34 341 aaPredicted RBP6□□□□□ -1.45
TRIM39-208ENST00000428555 COX7A2LO14548 114 aa6□□□□□ -1.45
TRIM39-208ENST00000428555 ERASQ7Z444 233 aa6□□□□□ -1.45
TRIM39-208ENST00000428555 C5orf38Q86SI9 138 aa6□□□□□ -1.45
TRIM39-208ENST00000428555 PKHD1L1Q86WI1 4243 aa5.99□□□□□ -1.45
TRIM39-208ENST00000428555 IGLV4-69A0A075B6H9 119 aa5.99□□□□□ -1.45
TRIM39-208ENST00000428555 RAB5AP20339 215 aa5.99□□□□□ -1.45
TRIM39-208ENST00000428555 HNRNPA3P51991 378 aaKnown RBP5.99□□□□□ -1.45
TRIM39-208ENST00000428555 SEC61GP60059 68 aa5.99□□□□□ -1.45
TRIM39-208ENST00000428555 SYCNQ0VAF6 134 aa5.99□□□□□ -1.45
TRIM39-208ENST00000428555 PLAC8Q9NZF1 115 aa5.99□□□□□ -1.45
TRIM39-208ENST00000428555 A0A096LNI7 61 aa5.98□□□□□ -1.45
TRIM39-208ENST00000428555 A0A0U1RRA0 63 aa5.98□□□□□ -1.45
TRIM39-208ENST00000428555 TMEM218A2RU14 115 aa5.98□□□□□ -1.45
TRIM39-208ENST00000428555 MRPS36P82909 103 aaKnown RBP5.98□□□□□ -1.45
TRIM39-208ENST00000428555 CARD19Q96LW7 228 aa5.98□□□□□ -1.45
TRIM39-208ENST00000428555 SPANXA1Q9NS26 97 aa5.98□□□□□ -1.45
TRIM39-208ENST00000428555 TMEM238C9JI98 176 aa5.97□□□□□ -1.45
TRIM39-208ENST00000428555 ADCYAP1P18509 176 aa5.97□□□□□ -1.45
TRIM39-208ENST00000428555 Q6ZRU5 148 aa5.97□□□□□ -1.45
TRIM39-208ENST00000428555 STPG4Q8N801 248 aa5.97□□□□□ -1.45
TRIM39-208ENST00000428555 IFITM10A6NMD0 228 aa5.96□□□□□ -1.46
TRIM39-208ENST00000428555 C5orf47Q569G3 176 aa5.96□□□□□ -1.46
TRIM39-208ENST00000428555 UQCC3Q6UW78 93 aa5.96□□□□□ -1.46
TRIM39-208ENST00000428555 Q8N8P6 123 aa5.96□□□□□ -1.46
TRIM39-208ENST00000428555 CAMK2N2Q96S95 79 aa5.96□□□□□ -1.46
TRIM39-208ENST00000428555 IMMP2LQ96T52 175 aa5.96□□□□□ -1.46
TRIM39-208ENST00000428555 MAP1LC3AQ9H492 121 aa5.96□□□□□ -1.46
TRIM39-208ENST00000428555 LAMTOR2Q9Y2Q5 125 aa5.96□□□□□ -1.46
TRIM39-208ENST00000428555 IGLV4-3A0A075B6K6 122 aa5.95□□□□□ -1.46
TRIM39-208ENST00000428555 IGHV3OR16-9A0A0B4J2B5 98 aa5.95□□□□□ -1.46
TRIM39-208ENST00000428555 APOMO95445 188 aa5.95□□□□□ -1.46
TRIM39-208ENST00000428555 OXTP01178 125 aa5.95□□□□□ -1.46
TRIM39-208ENST00000428555 IFI27P40305 119 aaPredicted RBP5.95□□□□□ -1.46
TRIM39-208ENST00000428555 GAGE2BQ13066 116 aa5.95□□□□□ -1.46
TRIM39-208ENST00000428555 C7orf33Q8WU49 177 aa5.95□□□□□ -1.46
TRIM39-208ENST00000428555 C2orf48Q96LS8 159 aa5.95□□□□□ -1.46
TRIM39-208ENST00000428555 PACRGQ96M98 296 aaPredicted RBP5.95□□□□□ -1.46
TRIM39-208ENST00000428555 LINC00474Q9P2X8 69 aa5.95□□□□□ -1.46
TRIM39-208ENST00000428555 PYGO1Q9Y3Y4 419 aa5.95□□□□□ -1.46
TRIM39-208ENST00000428555 A0A0J9YXV3 536 aa5.94□□□□□ -1.46
TRIM39-208ENST00000428555 SPAG11BQ08648 103 aa5.94□□□□□ -1.46
TRIM39-208ENST00000428555 KIAA1644Q3SXP7 199 aa5.94□□□□□ -1.46
TRIM39-208ENST00000428555 LBHQ53QV2 105 aaPredicted RBP5.94□□□□□ -1.46
TRIM39-208ENST00000428555 ZC2HC1BQ5TFG8 222 aa5.94□□□□□ -1.46
TRIM39-208ENST00000428555 SEC11CQ9BY50 192 aa5.94□□□□□ -1.46
TRIM39-208ENST00000428555 LOC107984640A0A0U1RRK4 108 aa5.93□□□□□ -1.46
TRIM39-208ENST00000428555 PTTG1IPP53801 180 aa5.93□□□□□ -1.46
TRIM39-208ENST00000428555 LINC00242Q5T6M2 205 aa5.93□□□□□ -1.46
TRIM39-208ENST00000428555 C2orf66Q6UXQ4 117 aa5.93□□□□□ -1.46
TRIM39-208ENST00000428555 COMMD7Q86VX2 200 aa5.93□□□□□ -1.46
TRIM39-208ENST00000428555 OR10D4PQ8NGN7 298 aa5.93□□□□□ -1.46
TRIM39-208ENST00000428555 ORAOV1Q8WV07 137 aa5.93□□□□□ -1.46
TRIM39-208ENST00000428555 TMEM141Q96I45 108 aa5.93□□□□□ -1.46
TRIM39-208ENST00000428555 PKIGQ9Y2B9 76 aa5.93□□□□□ -1.46
TRIM39-208ENST00000428555 A0A1W2PNN7 141 aa5.92□□□□□ -1.46
TRIM39-208ENST00000428555 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.92□□□□□ -1.46
TRIM39-208ENST00000428555 ORMDL2Q53FV1 153 aa5.92□□□□□ -1.46
TRIM39-208ENST00000428555 C6orf226Q5I0X4 101 aa5.92□□□□□ -1.46
TRIM39-208ENST00000428555 C10orf25Q5T742 122 aa5.92□□□□□ -1.46
TRIM39-208ENST00000428555 CYSLTR1Q9Y271 337 aa5.92□□□□□ -1.46
TRIM39-208ENST00000428555 HMCN2Q8NDA2 5059 aa5.92□□□□□ -1.46
TRIM39-208ENST00000428555 TRAV9-1A0A075B6T8 112 aa5.91□□□□□ -1.46
TRIM39-208ENST00000428555 A0A087WZ39 114 aa5.91□□□□□ -1.46
TRIM39-208ENST00000428555 TGIF2-C20orf24A0A0A6YYL0 155 aa5.91□□□□□ -1.46
TRIM39-208ENST00000428555 IGIPA6NJ69 53 aa5.91□□□□□ -1.46
TRIM39-208ENST00000428555 VPREB1P12018 145 aa5.91□□□□□ -1.46
TRIM39-208ENST00000428555 UBE2D1P51668 147 aa5.91□□□□□ -1.46
TRIM39-208ENST00000428555 RNF151Q2KHN1 245 aa5.91□□□□□ -1.46
TRIM39-208ENST00000428555 UNQ6190/PRO20217Q6UXQ8 127 aa5.91□□□□□ -1.46
TRIM39-208ENST00000428555 TEX43Q6ZNM6 134 aa5.91□□□□□ -1.46
TRIM39-208ENST00000428555 AMELXQ99217 191 aa5.91□□□□□ -1.46
TRIM39-208ENST00000428555 NXT2Q9NPJ8 142 aaKnown RBP5.91□□□□□ -1.46
TRIM39-208ENST00000428555 K7EMI3 77 aa5.9□□□□□ -1.46
TRIM39-208ENST00000428555 S100PP25815 95 aa5.9□□□□□ -1.46
TRIM39-208ENST00000428555 RPL18AQ02543 176 aaKnown RBP5.9□□□□□ -1.46
TRIM39-208ENST00000428555 KIAA0087Q14695 138 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms