RNA–Protein interactions for RNA: ENST00000427722.2

RFX3-AS1-202, RFX3 antisense RNA 1, humanhuman

TSL 5 BASIC

Gene RFX3-AS1, Length 1,088 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-AS1-202ENST00000427722 COX7A2LO14548 114 aa5.89□□□□□ -1.47
RFX3-AS1-202ENST00000427722 MALP21145 153 aa5.89□□□□□ -1.47
RFX3-AS1-202ENST00000427722 NDUFA5Q16718 116 aa5.89□□□□□ -1.47
RFX3-AS1-202ENST00000427722 C10orf91Q5T1B1 145 aa5.89□□□□□ -1.47
RFX3-AS1-202ENST00000427722 SLC7A5P1Q8MH63 180 aa5.89□□□□□ -1.47
RFX3-AS1-202ENST00000427722 TIMM21Q9BVV7 248 aa5.89□□□□□ -1.47
RFX3-AS1-202ENST00000427722 SPANXA1Q9NS26 97 aa5.89□□□□□ -1.47
RFX3-AS1-202ENST00000427722 IGKV2-24A0A0C4DH68 120 aa5.88□□□□□ -1.47
RFX3-AS1-202ENST00000427722 LOC389332A0A1B0GUA5 103 aa5.88□□□□□ -1.47
RFX3-AS1-202ENST00000427722 C1orf196B1AJZ1 125 aa5.88□□□□□ -1.47
RFX3-AS1-202ENST00000427722 RAB5AP20339 215 aa5.88□□□□□ -1.47
RFX3-AS1-202ENST00000427722 RPL37AP61513 92 aaKnown RBP5.88□□□□□ -1.47
RFX3-AS1-202ENST00000427722 COX6A2Q02221 97 aa5.88□□□□□ -1.47
RFX3-AS1-202ENST00000427722 SPACA4Q8TDM5 124 aa5.88□□□□□ -1.47
RFX3-AS1-202ENST00000427722 DPH3Q96FX2 82 aa5.88□□□□□ -1.47
RFX3-AS1-202ENST00000427722 CARD19Q96LW7 228 aa5.88□□□□□ -1.47
RFX3-AS1-202ENST00000427722 OPRPNQ99935 248 aaPredicted RBP5.88□□□□□ -1.47
RFX3-AS1-202ENST00000427722 SEC11CQ9BY50 192 aa5.88□□□□□ -1.47
RFX3-AS1-202ENST00000427722 MAP1LC3AQ9H492 121 aa5.88□□□□□ -1.47
RFX3-AS1-202ENST00000427722 IFITM10A6NMD0 228 aa5.87□□□□□ -1.47
RFX3-AS1-202ENST00000427722 ZNF561-AS1K7EIQ3 104 aa5.87□□□□□ -1.47
RFX3-AS1-202ENST00000427722 KRTAP10-4P60372 401 aaPredicted RBP5.87□□□□□ -1.47
RFX3-AS1-202ENST00000427722 CIRBPQ14011 172 aaKnown RBP5.87□□□□□ -1.47
RFX3-AS1-202ENST00000427722 C5orf38Q86SI9 138 aa5.87□□□□□ -1.47
RFX3-AS1-202ENST00000427722 PRSS3P2Q8NHM4 247 aa5.87□□□□□ -1.47
RFX3-AS1-202ENST00000427722 KRTAP3-1Q9BYR8 98 aa5.87□□□□□ -1.47
RFX3-AS1-202ENST00000427722 CTDSP1Q9GZU7 261 aa5.87□□□□□ -1.47
RFX3-AS1-202ENST00000427722 LAMTOR2Q9Y2Q5 125 aa5.87□□□□□ -1.47
RFX3-AS1-202ENST00000427722 CARHSP1Q9Y2V2 147 aaKnown RBP5.87□□□□□ -1.47
RFX3-AS1-202ENST00000427722 DMBT1Q9UGM3 2413 aaPredicted RBP5.87□□□□□ -1.47
RFX3-AS1-202ENST00000427722 VPS13BQ7Z7G8 4022 aa5.87□□□□□ -1.47
RFX3-AS1-202ENST00000427722 SRRM2Q9UQ35 2752 aaKnown RBP5.86□□□□□ -1.47
RFX3-AS1-202ENST00000427722 MYCBP2O75592 4640 aa5.86□□□□□ -1.47
RFX3-AS1-202ENST00000427722 A0A087WYN8 130 aa5.86□□□□□ -1.47
RFX3-AS1-202ENST00000427722 IFI27P40305 119 aaPredicted RBP5.86□□□□□ -1.47
RFX3-AS1-202ENST00000427722 MRPS36P82909 103 aaKnown RBP5.86□□□□□ -1.47
RFX3-AS1-202ENST00000427722 MAJINQ3KP22 176 aa5.86□□□□□ -1.47
RFX3-AS1-202ENST00000427722 FAM104AQ969W3 186 aa5.86□□□□□ -1.47
RFX3-AS1-202ENST00000427722 IMMP2LQ96T52 175 aa5.86□□□□□ -1.47
RFX3-AS1-202ENST00000427722 IGLV4-69A0A075B6H9 119 aa5.85□□□□□ -1.47
RFX3-AS1-202ENST00000427722 A0A096LNI7 61 aa5.85□□□□□ -1.47
RFX3-AS1-202ENST00000427722 SPAG11BQ08648 103 aa5.85□□□□□ -1.47
RFX3-AS1-202ENST00000427722 SYCNQ0VAF6 134 aa5.85□□□□□ -1.47
RFX3-AS1-202ENST00000427722 IGLV4-3A0A075B6K6 122 aa5.84□□□□□ -1.47
RFX3-AS1-202ENST00000427722 APOMO95445 188 aa5.84□□□□□ -1.47
RFX3-AS1-202ENST00000427722 S100PP25815 95 aa5.84□□□□□ -1.47
RFX3-AS1-202ENST00000427722 Q6ZRU5 148 aa5.84□□□□□ -1.47
RFX3-AS1-202ENST00000427722 Q8N8P6 123 aa5.84□□□□□ -1.47
RFX3-AS1-202ENST00000427722 CAMK2N2Q96S95 79 aa5.84□□□□□ -1.47
RFX3-AS1-202ENST00000427722 CYSLTR1Q9Y271 337 aa5.84□□□□□ -1.47
RFX3-AS1-202ENST00000427722 PKIGQ9Y2B9 76 aa5.84□□□□□ -1.47
RFX3-AS1-202ENST00000427722 TRAV9-1A0A075B6T8 112 aa5.83□□□□□ -1.48
RFX3-AS1-202ENST00000427722 PRSS47A8MTI9 375 aa5.83□□□□□ -1.48
RFX3-AS1-202ENST00000427722 HNRNPA3P51991 378 aaKnown RBP5.83□□□□□ -1.48
RFX3-AS1-202ENST00000427722 KIAA1644Q3SXP7 199 aa5.83□□□□□ -1.48
RFX3-AS1-202ENST00000427722 C2orf66Q6UXQ4 117 aa5.83□□□□□ -1.48
RFX3-AS1-202ENST00000427722 ORAOV1Q8WV07 137 aa5.83□□□□□ -1.48
RFX3-AS1-202ENST00000427722 TMEM141Q96I45 108 aa5.83□□□□□ -1.48
RFX3-AS1-202ENST00000427722 NXT2Q9NPJ8 142 aaKnown RBP5.83□□□□□ -1.48
RFX3-AS1-202ENST00000427722 PLAC8Q9NZF1 115 aa5.83□□□□□ -1.48
RFX3-AS1-202ENST00000427722 TGIF2-C20orf24A0A0A6YYL0 155 aa5.82□□□□□ -1.48
RFX3-AS1-202ENST00000427722 IGHV3OR16-9A0A0B4J2B5 98 aa5.82□□□□□ -1.48
RFX3-AS1-202ENST00000427722 APOC3P02656 99 aa5.82□□□□□ -1.48
RFX3-AS1-202ENST00000427722 ORMDL2Q53FV1 153 aa5.82□□□□□ -1.48
RFX3-AS1-202ENST00000427722 Q6ZN92 141 aa5.82□□□□□ -1.48
RFX3-AS1-202ENST00000427722 TEX43Q6ZNM6 134 aa5.82□□□□□ -1.48
RFX3-AS1-202ENST00000427722 STPG4Q8N801 248 aa5.82□□□□□ -1.48
RFX3-AS1-202ENST00000427722 C7orf33Q8WU49 177 aa5.82□□□□□ -1.48
RFX3-AS1-202ENST00000427722 C2orf88Q9BSF0 95 aa5.82□□□□□ -1.48
RFX3-AS1-202ENST00000427722 LINC00474Q9P2X8 69 aa5.82□□□□□ -1.48
RFX3-AS1-202ENST00000427722 PYGO1Q9Y3Y4 419 aa5.82□□□□□ -1.48
RFX3-AS1-202ENST00000427722 PTTG1IPP53801 180 aa5.81□□□□□ -1.48
RFX3-AS1-202ENST00000427722 RPL18AQ02543 176 aaKnown RBP5.81□□□□□ -1.48
RFX3-AS1-202ENST00000427722 GAGE2BQ13066 116 aa5.81□□□□□ -1.48
RFX3-AS1-202ENST00000427722 RHEBQ15382 184 aa5.81□□□□□ -1.48
RFX3-AS1-202ENST00000427722 ZC2HC1BQ5TFG8 222 aa5.81□□□□□ -1.48
RFX3-AS1-202ENST00000427722 OR10D4PQ8NGN7 298 aa5.81□□□□□ -1.48
RFX3-AS1-202ENST00000427722 C2orf48Q96LS8 159 aa5.81□□□□□ -1.48
RFX3-AS1-202ENST00000427722 RPS10P5Q9NQ39 176 aa5.81□□□□□ -1.48
RFX3-AS1-202ENST00000427722 A0A0J9YXV3 536 aa5.8□□□□□ -1.48
RFX3-AS1-202ENST00000427722 LOC107984640A0A0U1RRK4 108 aa5.8□□□□□ -1.48
RFX3-AS1-202ENST00000427722 KRTAP29-1A8MX34 341 aaPredicted RBP5.8□□□□□ -1.48
RFX3-AS1-202ENST00000427722 K7EMI3 77 aa5.8□□□□□ -1.48
RFX3-AS1-202ENST00000427722 UBE2D1P51668 147 aa5.8□□□□□ -1.48
RFX3-AS1-202ENST00000427722 LINC00242Q5T6M2 205 aa5.8□□□□□ -1.48
RFX3-AS1-202ENST00000427722 LINC00173Q6ZV60 143 aa5.8□□□□□ -1.48
RFX3-AS1-202ENST00000427722 SVBPQ8N300 66 aa5.8□□□□□ -1.48
RFX3-AS1-202ENST00000427722 GNB1LQ9BYB4 327 aa5.8□□□□□ -1.48
RFX3-AS1-202ENST00000427722 HERC1Q15751 4861 aa5.8□□□□□ -1.48
RFX3-AS1-202ENST00000427722 A0A087WZ39 114 aa5.79□□□□□ -1.48
RFX3-AS1-202ENST00000427722 IGIPA6NJ69 53 aa5.79□□□□□ -1.48
RFX3-AS1-202ENST00000427722 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.79□□□□□ -1.48
RFX3-AS1-202ENST00000427722 SNAPINO95295 136 aa5.79□□□□□ -1.48
RFX3-AS1-202ENST00000427722 VCX2Q9H322 139 aa5.79□□□□□ -1.48
RFX3-AS1-202ENST00000427722 NDUFA1O15239 70 aa5.78□□□□□ -1.48
RFX3-AS1-202ENST00000427722 MT-ND6P03923 174 aa5.78□□□□□ -1.48
RFX3-AS1-202ENST00000427722 PRR3P79522 188 aaKnown RBP5.78□□□□□ -1.48
RFX3-AS1-202ENST00000427722 C10orf25Q5T742 122 aa5.78□□□□□ -1.48
RFX3-AS1-202ENST00000427722 AMELXQ99217 191 aa5.78□□□□□ -1.48
RFX3-AS1-202ENST00000427722 NPSP0C0P6 89 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms