RNA–Protein interactions for RNA: ENST00000414879.5

PTPRF-205, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,836 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-205ENST00000414879 LOC107984640A0A0U1RRK4 108 aa8.64□□□□□ -1.03
PTPRF-205ENST00000414879 M0R378 163 aa8.64□□□□□ -1.03
PTPRF-205ENST00000414879 A0A0J9YWU9 116 aa8.63□□□□□ -1.03
PTPRF-205ENST00000414879 A0A1B0GUV1 79 aa8.63□□□□□ -1.03
PTPRF-205ENST00000414879 USP9XQ93008 2570 aaPredicted RBP8.63□□□□□ -1.03
PTPRF-205ENST00000414879 RANBP2P49792 3224 aaKnown RBP8.63□□□□□ -1.03
PTPRF-205ENST00000414879 CDH23Q9H251 3354 aa8.63□□□□□ -1.03
PTPRF-205ENST00000414879 FOXI1Q12951 378 aa8.63□□□□□ -1.03
PTPRF-205ENST00000414879 FHL2Q14192 279 aa8.63□□□□□ -1.03
PTPRF-205ENST00000414879 DOPEY1Q5JWR5 2465 aa8.62□□□□□ -1.03
PTPRF-205ENST00000414879 C7orf33Q8WU49 177 aa8.61□□□□□ -1.03
PTPRF-205ENST00000414879 DHRS4-AS1Q9P1J3 65 aa8.61□□□□□ -1.03
PTPRF-205ENST00000414879 ZNF706Q9Y5V0 76 aaPredicted RBP8.61□□□□□ -1.03
PTPRF-205ENST00000414879 EGFEM1PQ0D2K5 195 aa8.61□□□□□ -1.03
PTPRF-205ENST00000414879 IGKV2D-26A0A0A0MRZ7 120 aa8.6□□□□□ -1.03
PTPRF-205ENST00000414879 CLEC2BQ92478 149 aa8.6□□□□□ -1.03
PTPRF-205ENST00000414879 ATOX1O00244 68 aa8.6□□□□□ -1.03
PTPRF-205ENST00000414879 EDN2P20800 178 aa8.6□□□□□ -1.03
PTPRF-205ENST00000414879 ZNF462Q96JM2 2506 aa8.6□□□□□ -1.03
PTPRF-205ENST00000414879 WDR87Q6ZQQ6 2873 aa8.6□□□□□ -1.03
PTPRF-205ENST00000414879 A0A087WZ39 114 aa8.6□□□□□ -1.03
PTPRF-205ENST00000414879 IGKV2-24A0A0C4DH68 120 aa8.6□□□□□ -1.03
PTPRF-205ENST00000414879 LOC100131303A0A0U1RQF7 123 aa8.6□□□□□ -1.03
PTPRF-205ENST00000414879 AMELXQ99217 191 aa8.6□□□□□ -1.03
PTPRF-205ENST00000414879 FASNP49327 2511 aaKnown RBP8.6□□□□□ -1.03
PTPRF-205ENST00000414879 ATP5EP2Q5VTU8 51 aa8.6□□□□□ -1.03
PTPRF-205ENST00000414879 MAPKAPK5-AS1Q8N8E1 139 aa8.6□□□□□ -1.03
PTPRF-205ENST00000414879 ABCA12Q86UK0 2595 aa8.59□□□□□ -1.03
PTPRF-205ENST00000414879 FAM19A4Q96LR4 140 aa8.59□□□□□ -1.03
PTPRF-205ENST00000414879 SPTBN5Q9NRC6 3674 aaKnown RBP8.59□□□□□ -1.03
PTPRF-205ENST00000414879 NANOS2P60321 138 aaKnown RBP8.59□□□□□ -1.03
PTPRF-205ENST00000414879 WFDC2Q14508 124 aa8.59□□□□□ -1.03
PTPRF-205ENST00000414879 LINC00242Q5T6M2 205 aa8.59□□□□□ -1.03
PTPRF-205ENST00000414879 REV3LO60673 3130 aa8.59□□□□□ -1.03
PTPRF-205ENST00000414879 TCL1BO95988 128 aa8.59□□□□□ -1.03
PTPRF-205ENST00000414879 LINC00643Q86TS7 51 aa8.59□□□□□ -1.03
PTPRF-205ENST00000414879 LAMA3Q16787 3333 aa8.59□□□□□ -1.03
PTPRF-205ENST00000414879 TRAV23DV6A0A075B6W5 121 aa8.58□□□□□ -1.04
PTPRF-205ENST00000414879 USP9YO00507 2555 aaPredicted RBP8.57□□□□□ -1.04
PTPRF-205ENST00000414879 MP68P56378 58 aa8.57□□□□□ -1.04
PTPRF-205ENST00000414879 LAMA2P24043 3122 aaKnown RBP8.56□□□□□ -1.04
PTPRF-205ENST00000414879 FAM19A1Q7Z5A9 133 aa8.56□□□□□ -1.04
PTPRF-205ENST00000414879 H3BNG1 76 aa8.56□□□□□ -1.04
PTPRF-205ENST00000414879 IGLV2-18A0A075B6J9 118 aa8.56□□□□□ -1.04
PTPRF-205ENST00000414879 URB1-AS1Q96HZ7 61 aa8.55□□□□□ -1.04
PTPRF-205ENST00000414879 C2orf48Q96LS8 159 aa8.55□□□□□ -1.04
PTPRF-205ENST00000414879 HIGD2AQ9BW72 106 aa8.55□□□□□ -1.04
PTPRF-205ENST00000414879 LINC01546A6NGU7 62 aa8.55□□□□□ -1.04
PTPRF-205ENST00000414879 KIF25-AS1Q9Y6Z4 181 aa8.55□□□□□ -1.04
PTPRF-205ENST00000414879 GAS8-AS1O95177 125 aa8.55□□□□□ -1.04
PTPRF-205ENST00000414879 SMIM1B2RUZ4 78 aa8.54□□□□□ -1.04
PTPRF-205ENST00000414879 C2orf91Q6ZV80 131 aa8.54□□□□□ -1.04
PTPRF-205ENST00000414879 ZFYVE26Q68DK2 2539 aa8.54□□□□□ -1.04
PTPRF-205ENST00000414879 LINC00310P59036 64 aa8.54□□□□□ -1.04
PTPRF-205ENST00000414879 C11orf72Q8NBR9 251 aa8.54□□□□□ -1.04
PTPRF-205ENST00000414879 TRIAP1O43715 76 aa8.54□□□□□ -1.04
PTPRF-205ENST00000414879 C6orf99Q4VX62 202 aa8.54□□□□□ -1.04
PTPRF-205ENST00000414879 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.53□□□□□ -1.04
PTPRF-205ENST00000414879 XAGE1AQ9HD64 81 aa8.53□□□□□ -1.04
PTPRF-205ENST00000414879 LRRK2Q5S007 2527 aa8.53□□□□□ -1.04
PTPRF-205ENST00000414879 CYSRT1A8MQ03 144 aa8.53□□□□□ -1.04
PTPRF-205ENST00000414879 PRM2P04554 102 aa8.53□□□□□ -1.04
PTPRF-205ENST00000414879 C2CD3Q4AC94 2353 aa8.53□□□□□ -1.04
PTPRF-205ENST00000414879 NDUFS5O43920 106 aa8.52□□□□□ -1.04
PTPRF-205ENST00000414879 PKD1L2Q7Z442 2459 aa8.52□□□□□ -1.04
PTPRF-205ENST00000414879 Q6ZTC4 211 aa8.52□□□□□ -1.05
PTPRF-205ENST00000414879 G3V4G9 280 aa8.52□□□□□ -1.05
PTPRF-205ENST00000414879 POM121L12Q8N7R1 296 aa8.52□□□□□ -1.05
PTPRF-205ENST00000414879 SS18L2Q9UHA2 77 aa8.52□□□□□ -1.05
PTPRF-205ENST00000414879 SZT2Q5T011 3432 aa8.52□□□□□ -1.05
PTPRF-205ENST00000414879 LST1O00453 97 aa8.52□□□□□ -1.05
PTPRF-205ENST00000414879 TLN2Q9Y4G6 2542 aa8.51□□□□□ -1.05
PTPRF-205ENST00000414879 FAM19A5Q7Z5A7 132 aaPredicted RBP8.51□□□□□ -1.05
PTPRF-205ENST00000414879 NDUFC2O95298 119 aa8.51□□□□□ -1.05
PTPRF-205ENST00000414879 XIRP2A4UGR9 3374 aa8.51□□□□□ -1.05
PTPRF-205ENST00000414879 JMJD1CQ15652 2540 aa8.51□□□□□ -1.05
PTPRF-205ENST00000414879 BPY2O14599 106 aa8.5□□□□□ -1.05
PTPRF-205ENST00000414879 LYPD5Q6UWN5 251 aa8.5□□□□□ -1.05
PTPRF-205ENST00000414879 ZNF73O43830 326 aaPredicted RBP8.49□□□□□ -1.05
PTPRF-205ENST00000414879 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.49□□□□□ -1.05
PTPRF-205ENST00000414879 C14orf132Q9NPU4 83 aa8.49□□□□□ -1.05
PTPRF-205ENST00000414879 WFDC9Q8NEX5 89 aa8.48□□□□□ -1.05
PTPRF-205ENST00000414879 RETNQ9HD89 108 aa8.48□□□□□ -1.05
PTPRF-205ENST00000414879 LY6G6CO95867 125 aa8.47□□□□□ -1.05
PTPRF-205ENST00000414879 EPG5Q9HCE0 2579 aa8.47□□□□□ -1.05
PTPRF-205ENST00000414879 IGLV4-60A0A075B6I1 120 aa8.47□□□□□ -1.05
PTPRF-205ENST00000414879 A0A096LNJ9 63 aa8.47□□□□□ -1.05
PTPRF-205ENST00000414879 RPL28P46779 137 aaKnown RBP8.47□□□□□ -1.05
PTPRF-205ENST00000414879 IGKV3D-7A0A0C4DH55 119 aa8.46□□□□□ -1.05
PTPRF-205ENST00000414879 TET2Q6N021 2002 aaPredicted RBP8.46□□□□□ -1.05
PTPRF-205ENST00000414879 DSCAML1Q8TD84 2053 aa8.46□□□□□ -1.05
PTPRF-205ENST00000414879 A8MZ25 164 aa8.46□□□□□ -1.05
PTPRF-205ENST00000414879 TMEM258P61165 79 aa8.46□□□□□ -1.05
PTPRF-205ENST00000414879 SMIM11BQ8TCY0 68 aa8.46□□□□□ -1.05
PTPRF-205ENST00000414879 A0A096LNT2 108 aa8.46□□□□□ -1.06
PTPRF-205ENST00000414879 LINC00694P0DN24 101 aa8.46□□□□□ -1.06
PTPRF-205ENST00000414879 FN1P02751 2386 aaKnown RBP8.45□□□□□ -1.06
PTPRF-205ENST00000414879 NDUFC2-KCTD14E9PQ53 114 aa8.45□□□□□ -1.06
PTPRF-205ENST00000414879 LINC00315P59091 139 aa8.45□□□□□ -1.06
PTPRF-205ENST00000414879 LINC01556Q5JQF7 62 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 166 ms