RNA–Protein interactions for RNA: ENST00000403997.2

SDF4-203, Transcript of stromal cell derived factor 4, humanhuman

TSL 3

Gene SDF4, Length 728 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-203ENST00000403997 PKHD1L1Q86WI1 4243 aa8.37□□□□□ -1.07
SDF4-203ENST00000403997 PRSS47A8MTI9 375 aa8.36□□□□□ -1.07
SDF4-203ENST00000403997 IFI27P40305 119 aaPredicted RBP8.36□□□□□ -1.07
SDF4-203ENST00000403997 SPAG11BQ08648 103 aa8.36□□□□□ -1.07
SDF4-203ENST00000403997 GAGE2BQ13066 116 aa8.36□□□□□ -1.07
SDF4-203ENST00000403997 C2orf48Q96LS8 159 aa8.36□□□□□ -1.07
SDF4-203ENST00000403997 PTTG1IPP53801 180 aa8.35□□□□□ -1.07
SDF4-203ENST00000403997 CTDSP1Q9GZU7 261 aa8.35□□□□□ -1.07
SDF4-203ENST00000403997 PYGO1Q9Y3Y4 419 aa8.35□□□□□ -1.07
SDF4-203ENST00000403997 LRP1Q07954 4544 aaKnown RBP8.35□□□□□ -1.07
SDF4-203ENST00000403997 IGHV3OR16-9A0A0B4J2B5 98 aa8.34□□□□□ -1.07
SDF4-203ENST00000403997 UQCC3Q6UW78 93 aa8.34□□□□□ -1.07
SDF4-203ENST00000403997 Q8N8P6 123 aa8.34□□□□□ -1.07
SDF4-203ENST00000403997 OR10D4PQ8NGN7 298 aa8.34□□□□□ -1.07
SDF4-203ENST00000403997 ORAOV1Q8WV07 137 aa8.34□□□□□ -1.07
SDF4-203ENST00000403997 IGLV4-3A0A075B6K6 122 aa8.33□□□□□ -1.08
SDF4-203ENST00000403997 A0A0J9YXV3 536 aa8.33□□□□□ -1.08
SDF4-203ENST00000403997 TMEM218A2RU14 115 aa8.33□□□□□ -1.08
SDF4-203ENST00000403997 SERTAD4-AS1Q5TG53 156 aa8.33□□□□□ -1.08
SDF4-203ENST00000403997 TMEM141Q96I45 108 aa8.33□□□□□ -1.08
SDF4-203ENST00000403997 IMMP2LQ96T52 175 aa8.33□□□□□ -1.08
SDF4-203ENST00000403997 TGIF2-C20orf24A0A0A6YYL0 155 aa8.32□□□□□ -1.08
SDF4-203ENST00000403997 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.32□□□□□ -1.08
SDF4-203ENST00000403997 PRR3P79522 188 aaKnown RBP8.32□□□□□ -1.08
SDF4-203ENST00000403997 IFITM2Q01629 132 aa8.32□□□□□ -1.08
SDF4-203ENST00000403997 CYSLTR1Q9Y271 337 aa8.32□□□□□ -1.08
SDF4-203ENST00000403997 F8WDY8 70 aa8.31□□□□□ -1.08
SDF4-203ENST00000403997 ADCYAP1P18509 176 aa8.31□□□□□ -1.08
SDF4-203ENST00000403997 RPL18AQ02543 176 aaKnown RBP8.31□□□□□ -1.08
SDF4-203ENST00000403997 RNF151Q2KHN1 245 aa8.31□□□□□ -1.08
SDF4-203ENST00000403997 C2orf66Q6UXQ4 117 aa8.31□□□□□ -1.08
SDF4-203ENST00000403997 TEX43Q6ZNM6 134 aa8.31□□□□□ -1.08
SDF4-203ENST00000403997 A0A1W2PNN7 141 aa8.3□□□□□ -1.08
SDF4-203ENST00000403997 NDUFA1O15239 70 aa8.3□□□□□ -1.08
SDF4-203ENST00000403997 KIAA1644Q3SXP7 199 aa8.3□□□□□ -1.08
SDF4-203ENST00000403997 ORMDL2Q53FV1 153 aa8.3□□□□□ -1.08
SDF4-203ENST00000403997 LINC00242Q5T6M2 205 aa8.3□□□□□ -1.08
SDF4-203ENST00000403997 Q6ZN92 141 aa8.3□□□□□ -1.08
SDF4-203ENST00000403997 C2orf88Q9BSF0 95 aa8.3□□□□□ -1.08
SDF4-203ENST00000403997 VCX2Q9H322 139 aa8.3□□□□□ -1.08
SDF4-203ENST00000403997 NXT2Q9NPJ8 142 aaKnown RBP8.3□□□□□ -1.08
SDF4-203ENST00000403997 MRPL35Q9NZE8 188 aaKnown RBP8.3□□□□□ -1.08
SDF4-203ENST00000403997 FAT3Q8TDW7 4589 aa8.3□□□□□ -1.08
SDF4-203ENST00000403997 A0A087WZ39 114 aa8.29□□□□□ -1.08
SDF4-203ENST00000403997 K7EMI3 77 aa8.29□□□□□ -1.08
SDF4-203ENST00000403997 C9orf116Q5BN46 136 aaPredicted RBP8.29□□□□□ -1.08
SDF4-203ENST00000403997 ZC2HC1BQ5TFG8 222 aa8.29□□□□□ -1.08
SDF4-203ENST00000403997 UNQ6190/PRO20217Q6UXQ8 127 aa8.29□□□□□ -1.08
SDF4-203ENST00000403997 TRAV9-1A0A075B6T8 112 aa8.28□□□□□ -1.08
SDF4-203ENST00000403997 MT1HL1P0DM35 61 aa8.28□□□□□ -1.08
SDF4-203ENST00000403997 UBE2D1P51668 147 aa8.28□□□□□ -1.08
SDF4-203ENST00000403997 C10orf25Q5T742 122 aa8.28□□□□□ -1.08
SDF4-203ENST00000403997 Q6ZRP5 223 aa8.28□□□□□ -1.08
SDF4-203ENST00000403997 SEC11CQ9BY50 192 aa8.28□□□□□ -1.08
SDF4-203ENST00000403997 IGIPA6NJ69 53 aa8.27□□□□□ -1.09
SDF4-203ENST00000403997 S100PP25815 95 aa8.27□□□□□ -1.09
SDF4-203ENST00000403997 G0S2P27469 103 aa8.27□□□□□ -1.09
SDF4-203ENST00000403997 COMMD7Q86VX2 200 aa8.27□□□□□ -1.09
SDF4-203ENST00000403997 AMELXQ99217 191 aa8.27□□□□□ -1.09
SDF4-203ENST00000403997 NPSP0C0P6 89 aa8.26□□□□□ -1.09
SDF4-203ENST00000403997 KIAA0087Q14695 138 aa8.26□□□□□ -1.09
SDF4-203ENST00000403997 LINC00173Q6ZV60 143 aa8.26□□□□□ -1.09
SDF4-203ENST00000403997 C6orf48Q9UBA6 75 aa8.26□□□□□ -1.09
SDF4-203ENST00000403997 SPINK6Q6UWN8 80 aa8.25□□□□□ -1.09
SDF4-203ENST00000403997 LINC01561Q8N1V8 128 aa8.25□□□□□ -1.09
SDF4-203ENST00000403997 TLX1NBP0CAT3 122 aa8.24□□□□□ -1.09
SDF4-203ENST00000403997 GAGE2EQ4V326 116 aa8.24□□□□□ -1.09
SDF4-203ENST00000403997 PAPPA-AS1Q5QFB9 102 aa8.24□□□□□ -1.09
SDF4-203ENST00000403997 C2orf82Q6UX34 121 aa8.24□□□□□ -1.09
SDF4-203ENST00000403997 PHF5AQ7RTV0 110 aaKnown RBP8.24□□□□□ -1.09
SDF4-203ENST00000403997 GNB1LQ9BYB4 327 aa8.24□□□□□ -1.09
SDF4-203ENST00000403997 GAGE2DQ9UEU5 116 aa8.24□□□□□ -1.09
SDF4-203ENST00000403997 PLA2G2DQ9UNK4 145 aa8.24□□□□□ -1.09
SDF4-203ENST00000403997 MT-ND6P03923 174 aa8.23□□□□□ -1.09
SDF4-203ENST00000403997 PRSS2P07478 247 aa8.23□□□□□ -1.09
SDF4-203ENST00000403997 SRSF9Q13242 221 aaKnown RBP eCLIP8.23□□□□□ -1.09
SDF4-203ENST00000403997 TOMM6Q96B49 74 aa8.23□□□□□ -1.09
SDF4-203ENST00000403997 PACRGQ96M98 296 aaPredicted RBP8.23□□□□□ -1.09
SDF4-203ENST00000403997 TIMM17AQ99595 171 aa8.23□□□□□ -1.09
SDF4-203ENST00000403997 TOMM7Q9P0U1 55 aa8.23□□□□□ -1.09
SDF4-203ENST00000403997 TRBV30A0A0K0K1B3 111 aa8.22□□□□□ -1.09
SDF4-203ENST00000403997 SEC11AP67812 179 aa8.22□□□□□ -1.09
SDF4-203ENST00000403997 REG3GQ6UW15 175 aa8.22□□□□□ -1.09
SDF4-203ENST00000403997 LINC01600Q96MT4 127 aa8.22□□□□□ -1.09
SDF4-203ENST00000403997 SCGB3A1Q96QR1 104 aa8.22□□□□□ -1.09
SDF4-203ENST00000403997 GEMIN7Q9H840 131 aaKnown RBP8.22□□□□□ -1.09
SDF4-203ENST00000403997 PSORS1C2Q9UIG4 136 aa8.22□□□□□ -1.09
SDF4-203ENST00000403997 FAM168BA1KXE4 195 aa8.21□□□□□ -1.1
SDF4-203ENST00000403997 CKS1BP61024 79 aa8.21□□□□□ -1.1
SDF4-203ENST00000403997 HERVK_113P63121 156 aa8.21□□□□□ -1.1
SDF4-203ENST00000403997 FABP9Q0Z7S8 132 aa8.21□□□□□ -1.1
SDF4-203ENST00000403997 COX19Q49B96 90 aa8.21□□□□□ -1.1
SDF4-203ENST00000403997 C6orf226Q5I0X4 101 aa8.21□□□□□ -1.1
SDF4-203ENST00000403997 ERASQ7Z444 233 aa8.21□□□□□ -1.1
SDF4-203ENST00000403997 FAM19A3Q7Z5A8 133 aa8.21□□□□□ -1.1
SDF4-203ENST00000403997 ALKBH7Q9BT30 221 aaPredicted RBP8.21□□□□□ -1.1
SDF4-203ENST00000403997 RPS10P5Q9NQ39 176 aa8.21□□□□□ -1.1
SDF4-203ENST00000403997 C10orf91Q5T1B1 145 aa8.2□□□□□ -1.1
SDF4-203ENST00000403997 FAM19A5Q7Z5A7 132 aaPredicted RBP8.2□□□□□ -1.1
SDF4-203ENST00000403997 CDKN2A-AS1Q9UH64 79 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms