RNA–Protein interactions for RNA: ENST00000399973.1

USP16-202, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 3

Gene USP16, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-202ENST00000399973 SYCNQ0VAF6 134 aa5.37□□□□□ -1.55
USP16-202ENST00000399973 MAJINQ3KP22 176 aa5.37□□□□□ -1.55
USP16-202ENST00000399973 KIAA1644Q3SXP7 199 aa5.37□□□□□ -1.55
USP16-202ENST00000399973 Q8N8P6 123 aa5.37□□□□□ -1.55
USP16-202ENST00000399973 CYSLTR1Q9Y271 337 aa5.37□□□□□ -1.55
USP16-202ENST00000399973 DMBT1Q9UGM3 2413 aaPredicted RBP5.37□□□□□ -1.55
USP16-202ENST00000399973 IGLV4-3A0A075B6K6 122 aa5.36□□□□□ -1.55
USP16-202ENST00000399973 TRAV9-1A0A075B6T8 112 aa5.36□□□□□ -1.55
USP16-202ENST00000399973 A0A087WYN8 130 aa5.36□□□□□ -1.55
USP16-202ENST00000399973 TGIF2-C20orf24A0A0A6YYL0 155 aa5.36□□□□□ -1.55
USP16-202ENST00000399973 APOMO95445 188 aa5.36□□□□□ -1.55
USP16-202ENST00000399973 MRPS36P82909 103 aaKnown RBP5.36□□□□□ -1.55
USP16-202ENST00000399973 C2orf66Q6UXQ4 117 aa5.36□□□□□ -1.55
USP16-202ENST00000399973 Q6ZN92 141 aa5.36□□□□□ -1.55
USP16-202ENST00000399973 ORAOV1Q8WV07 137 aa5.36□□□□□ -1.55
USP16-202ENST00000399973 TMEM141Q96I45 108 aa5.36□□□□□ -1.55
USP16-202ENST00000399973 CAMK2N2Q96S95 79 aa5.36□□□□□ -1.55
USP16-202ENST00000399973 RPS10P5Q9NQ39 176 aa5.36□□□□□ -1.55
USP16-202ENST00000399973 PKIGQ9Y2B9 76 aa5.36□□□□□ -1.55
USP16-202ENST00000399973 MYCBP2O75592 4640 aa5.36□□□□□ -1.55
USP16-202ENST00000399973 CIRBPQ14011 172 aaKnown RBP5.35□□□□□ -1.55
USP16-202ENST00000399973 RHEBQ15382 184 aa5.35□□□□□ -1.55
USP16-202ENST00000399973 ORMDL2Q53FV1 153 aa5.35□□□□□ -1.55
USP16-202ENST00000399973 TEX43Q6ZNM6 134 aa5.35□□□□□ -1.55
USP16-202ENST00000399973 Q6ZRU5 148 aa5.35□□□□□ -1.55
USP16-202ENST00000399973 STPG4Q8N801 248 aa5.35□□□□□ -1.55
USP16-202ENST00000399973 FAM104AQ969W3 186 aa5.35□□□□□ -1.55
USP16-202ENST00000399973 C2orf88Q9BSF0 95 aa5.35□□□□□ -1.55
USP16-202ENST00000399973 NXT2Q9NPJ8 142 aaKnown RBP5.35□□□□□ -1.55
USP16-202ENST00000399973 PRSS47A8MTI9 375 aa5.34□□□□□ -1.55
USP16-202ENST00000399973 RPL18AQ02543 176 aaKnown RBP5.34□□□□□ -1.55
USP16-202ENST00000399973 ZC2HC1BQ5TFG8 222 aa5.34□□□□□ -1.55
USP16-202ENST00000399973 OR10D4PQ8NGN7 298 aa5.34□□□□□ -1.55
USP16-202ENST00000399973 CARHSP1Q9Y2V2 147 aaKnown RBP5.34□□□□□ -1.55
USP16-202ENST00000399973 A0A0J9YXV3 536 aa5.33□□□□□ -1.56
USP16-202ENST00000399973 LOC107984640A0A0U1RRK4 108 aa5.33□□□□□ -1.56
USP16-202ENST00000399973 APOC3P02656 99 aa5.33□□□□□ -1.56
USP16-202ENST00000399973 KRTAP10-4P60372 401 aaPredicted RBP5.33□□□□□ -1.56
USP16-202ENST00000399973 GAGE2BQ13066 116 aa5.33□□□□□ -1.56
USP16-202ENST00000399973 NDUFA5Q16718 116 aa5.33□□□□□ -1.56
USP16-202ENST00000399973 C7orf33Q8WU49 177 aa5.33□□□□□ -1.56
USP16-202ENST00000399973 GNB1LQ9BYB4 327 aa5.33□□□□□ -1.56
USP16-202ENST00000399973 MRPL18Q9H0U6 180 aaKnown RBP5.33□□□□□ -1.56
USP16-202ENST00000399973 PLAC8Q9NZF1 115 aa5.33□□□□□ -1.56
USP16-202ENST00000399973 PYGO1Q9Y3Y4 419 aa5.33□□□□□ -1.56
USP16-202ENST00000399973 PKHD1L1Q86WI1 4243 aa5.32□□□□□ -1.56
USP16-202ENST00000399973 IGHV3OR16-9A0A0B4J2B5 98 aa5.32□□□□□ -1.56
USP16-202ENST00000399973 K7EMI3 77 aa5.32□□□□□ -1.56
USP16-202ENST00000399973 MT-ND6P03923 174 aa5.32□□□□□ -1.56
USP16-202ENST00000399973 HNRNPA3P51991 378 aaKnown RBP5.32□□□□□ -1.56
USP16-202ENST00000399973 FABP9Q0Z7S8 132 aa5.32□□□□□ -1.56
USP16-202ENST00000399973 C10orf91Q5T1B1 145 aa5.32□□□□□ -1.56
USP16-202ENST00000399973 LINC00242Q5T6M2 205 aa5.32□□□□□ -1.56
USP16-202ENST00000399973 C2orf48Q96LS8 159 aa5.32□□□□□ -1.56
USP16-202ENST00000399973 VCX2Q9H322 139 aa5.32□□□□□ -1.56
USP16-202ENST00000399973 SMCO4Q9NRQ5 59 aa5.32□□□□□ -1.56
USP16-202ENST00000399973 LINC00474Q9P2X8 69 aa5.32□□□□□ -1.56
USP16-202ENST00000399973 HERC1Q15751 4861 aa5.31□□□□□ -1.56
USP16-202ENST00000399973 NDUFA1O15239 70 aa5.31□□□□□ -1.56
USP16-202ENST00000399973 UBE2D1P51668 147 aa5.31□□□□□ -1.56
USP16-202ENST00000399973 PTTG1IPP53801 180 aa5.31□□□□□ -1.56
USP16-202ENST00000399973 COX19Q49B96 90 aa5.31□□□□□ -1.56
USP16-202ENST00000399973 LINC00173Q6ZV60 143 aa5.31□□□□□ -1.56
USP16-202ENST00000399973 FA2HQ7L5A8 372 aa5.31□□□□□ -1.56
USP16-202ENST00000399973 ALKBH7Q9BT30 221 aaPredicted RBP5.31□□□□□ -1.56
USP16-202ENST00000399973 A0A087WZ39 114 aa5.3□□□□□ -1.56
USP16-202ENST00000399973 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.3□□□□□ -1.56
USP16-202ENST00000399973 SNAPINO95295 136 aa5.3□□□□□ -1.56
USP16-202ENST00000399973 G0S2P27469 103 aa5.3□□□□□ -1.56
USP16-202ENST00000399973 PAPPA-AS1Q5QFB9 102 aa5.3□□□□□ -1.56
USP16-202ENST00000399973 SVBPQ8N300 66 aa5.3□□□□□ -1.56
USP16-202ENST00000399973 TOMM6Q96B49 74 aa5.3□□□□□ -1.56
USP16-202ENST00000399973 SCGB3A1Q96QR1 104 aa5.3□□□□□ -1.56
USP16-202ENST00000399973 TOMM7Q9P0U1 55 aa5.3□□□□□ -1.56
USP16-202ENST00000399973 IGIPA6NJ69 53 aa5.29□□□□□ -1.56
USP16-202ENST00000399973 PRSS2P07478 247 aa5.29□□□□□ -1.56
USP16-202ENST00000399973 C10orf25Q5T742 122 aa5.29□□□□□ -1.56
USP16-202ENST00000399973 XP32Q5T750 250 aa5.29□□□□□ -1.56
USP16-202ENST00000399973 UNQ6190/PRO20217Q6UXQ8 127 aa5.29□□□□□ -1.56
USP16-202ENST00000399973 PACRGQ96M98 296 aaPredicted RBP5.29□□□□□ -1.56
USP16-202ENST00000399973 AMELXQ99217 191 aa5.29□□□□□ -1.56
USP16-202ENST00000399973 TIMM17AQ99595 171 aa5.29□□□□□ -1.56
USP16-202ENST00000399973 GEMIN7Q9H840 131 aaKnown RBP5.29□□□□□ -1.56
USP16-202ENST00000399973 MRPL35Q9NZE8 188 aaKnown RBP5.29□□□□□ -1.56
USP16-202ENST00000399973 C6orf48Q9UBA6 75 aa5.29□□□□□ -1.56
USP16-202ENST00000399973 TRAPPC1Q9Y5R8 145 aa5.29□□□□□ -1.56
USP16-202ENST00000399973 KRTAP29-1A8MX34 341 aaPredicted RBP5.28□□□□□ -1.56
USP16-202ENST00000399973 NPSP0C0P6 89 aa5.28□□□□□ -1.56
USP16-202ENST00000399973 PRR3P79522 188 aaKnown RBP5.28□□□□□ -1.56
USP16-202ENST00000399973 C2orf82Q6UX34 121 aa5.28□□□□□ -1.56
USP16-202ENST00000399973 ERASQ7Z444 233 aa5.28□□□□□ -1.56
USP16-202ENST00000399973 F8WDY8 70 aa5.27□□□□□ -1.57
USP16-202ENST00000399973 CKS1BP61024 79 aa5.27□□□□□ -1.57
USP16-202ENST00000399973 HERVK_113P63121 156 aa5.27□□□□□ -1.57
USP16-202ENST00000399973 SEC11AP67812 179 aa5.27□□□□□ -1.57
USP16-202ENST00000399973 GAGE2EQ4V326 116 aa5.27□□□□□ -1.57
USP16-202ENST00000399973 C9orf116Q5BN46 136 aaPredicted RBP5.27□□□□□ -1.57
USP16-202ENST00000399973 FAM19A5Q7Z5A7 132 aaPredicted RBP5.27□□□□□ -1.57
USP16-202ENST00000399973 LINC00469Q8N7U9 141 aa5.27□□□□□ -1.57
USP16-202ENST00000399973 GAGE2DQ9UEU5 116 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms