RNA–Protein interactions for RNA: ENST00000394892.2

ATG4A-205, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-205ENST00000394892 PPP1R2P9O14990 202 aa5.5□□□□□ -1.53
ATG4A-205ENST00000394892 PPP1R17O96001 155 aa5.5□□□□□ -1.53
ATG4A-205ENST00000394892 SLC7A5P1Q8MH63 180 aa5.5□□□□□ -1.53
ATG4A-205ENST00000394892 KIR2DL4Q99706 377 aa5.5□□□□□ -1.53
ATG4A-205ENST00000394892 IGHV3OR16-9A0A0B4J2B5 98 aa5.49□□□□□ -1.53
ATG4A-205ENST00000394892 A0A0J9YXV3 536 aa5.49□□□□□ -1.53
ATG4A-205ENST00000394892 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.49□□□□□ -1.53
ATG4A-205ENST00000394892 PTTG1IPP53801 180 aa5.49□□□□□ -1.53
ATG4A-205ENST00000394892 C10orf25Q5T742 122 aa5.49□□□□□ -1.53
ATG4A-205ENST00000394892 C7orf33Q8WU49 177 aa5.49□□□□□ -1.53
ATG4A-205ENST00000394892 LRP2P98164 4655 aa5.48□□□□□ -1.53
ATG4A-205ENST00000394892 ZNF561-AS1K7EIQ3 104 aa5.48□□□□□ -1.53
ATG4A-205ENST00000394892 S100A6P06703 90 aa5.48□□□□□ -1.53
ATG4A-205ENST00000394892 MRPS36P82909 103 aaKnown RBP5.48□□□□□ -1.53
ATG4A-205ENST00000394892 IFITM2Q01629 132 aa5.48□□□□□ -1.53
ATG4A-205ENST00000394892 SRSF9Q13242 221 aaKnown RBP eCLIP5.48□□□□□ -1.53
ATG4A-205ENST00000394892 ZC2HC1BQ5TFG8 222 aa5.48□□□□□ -1.53
ATG4A-205ENST00000394892 TMEM136Q6ZRR5 245 aa5.48□□□□□ -1.53
ATG4A-205ENST00000394892 KRTAP11-1Q8IUC1 163 aa5.48□□□□□ -1.53
ATG4A-205ENST00000394892 IGLV4-3A0A075B6K6 122 aa5.47□□□□□ -1.53
ATG4A-205ENST00000394892 F8W036 122 aa5.47□□□□□ -1.53
ATG4A-205ENST00000394892 GHRHP01286 108 aa5.47□□□□□ -1.53
ATG4A-205ENST00000394892 ADCYAP1P18509 176 aa5.47□□□□□ -1.53
ATG4A-205ENST00000394892 GAGE2BQ13066 116 aa5.47□□□□□ -1.53
ATG4A-205ENST00000394892 KIAA0087Q14695 138 aa5.47□□□□□ -1.53
ATG4A-205ENST00000394892 ATP5L2Q7Z4Y8 100 aa5.47□□□□□ -1.53
ATG4A-205ENST00000394892 KRTAP7-1Q8IUC3 87 aa5.47□□□□□ -1.53
ATG4A-205ENST00000394892 C2orf48Q96LS8 159 aa5.47□□□□□ -1.53
ATG4A-205ENST00000394892 PRELID3AQ96N28 172 aa5.47□□□□□ -1.53
ATG4A-205ENST00000394892 SPANXA1Q9NS26 97 aa5.47□□□□□ -1.53
ATG4A-205ENST00000394892 PPBPP02775 128 aa5.46□□□□□ -1.54
ATG4A-205ENST00000394892 MALP21145 153 aa5.46□□□□□ -1.54
ATG4A-205ENST00000394892 SPAG11BQ08648 103 aa5.46□□□□□ -1.54
ATG4A-205ENST00000394892 LINC00242Q5T6M2 205 aa5.46□□□□□ -1.54
ATG4A-205ENST00000394892 LINC00173Q6ZV60 143 aa5.46□□□□□ -1.54
ATG4A-205ENST00000394892 ORMDL3Q8N138 153 aa5.46□□□□□ -1.54
ATG4A-205ENST00000394892 LOC107984640A0A0U1RRK4 108 aa5.45□□□□□ -1.54
ATG4A-205ENST00000394892 LOC389332A0A1B0GUA5 103 aa5.45□□□□□ -1.54
ATG4A-205ENST00000394892 APOMO95445 188 aa5.45□□□□□ -1.54
ATG4A-205ENST00000394892 S100A8P05109 93 aa5.45□□□□□ -1.54
ATG4A-205ENST00000394892 KRTAP10-8P60410 259 aa5.45□□□□□ -1.54
ATG4A-205ENST00000394892 C9orf116Q5BN46 136 aaPredicted RBP5.45□□□□□ -1.54
ATG4A-205ENST00000394892 UNQ6190/PRO20217Q6UXQ8 127 aa5.45□□□□□ -1.54
ATG4A-205ENST00000394892 ORAOV1Q8WV07 137 aa5.45□□□□□ -1.54
ATG4A-205ENST00000394892 TMEM18Q96B42 140 aa5.45□□□□□ -1.54
ATG4A-205ENST00000394892 LINC01600Q96MT4 127 aa5.45□□□□□ -1.54
ATG4A-205ENST00000394892 CAMK2N2Q96S95 79 aa5.45□□□□□ -1.54
ATG4A-205ENST00000394892 LINC00474Q9P2X8 69 aa5.45□□□□□ -1.54
ATG4A-205ENST00000394892 C6orf48Q9UBA6 75 aa5.45□□□□□ -1.54
ATG4A-205ENST00000394892 PYGO1Q9Y3Y4 419 aa5.45□□□□□ -1.54
ATG4A-205ENST00000394892 FAM168BA1KXE4 195 aa5.44□□□□□ -1.54
ATG4A-205ENST00000394892 IFITM10A6NMD0 228 aa5.44□□□□□ -1.54
ATG4A-205ENST00000394892 EIF4EBP3O60516 100 aaPredicted RBP5.44□□□□□ -1.54
ATG4A-205ENST00000394892 RNF151Q2KHN1 245 aa5.44□□□□□ -1.54
ATG4A-205ENST00000394892 CLLU1Q5K131 121 aa5.44□□□□□ -1.54
ATG4A-205ENST00000394892 Q6ZRP5 223 aa5.44□□□□□ -1.54
ATG4A-205ENST00000394892 PHF5AQ7RTV0 110 aaKnown RBP5.44□□□□□ -1.54
ATG4A-205ENST00000394892 OR10D4PQ8NGN7 298 aa5.44□□□□□ -1.54
ATG4A-205ENST00000394892 A0A087WZ39 114 aa5.43□□□□□ -1.54
ATG4A-205ENST00000394892 IGIPA6NJ69 53 aa5.43□□□□□ -1.54
ATG4A-205ENST00000394892 UBE2D1P51668 147 aa5.43□□□□□ -1.54
ATG4A-205ENST00000394892 SMAGPQ0VAQ4 97 aa5.43□□□□□ -1.54
ATG4A-205ENST00000394892 PNRC1Q12796 327 aaPredicted RBP5.43□□□□□ -1.54
ATG4A-205ENST00000394892 XP32Q5T750 250 aa5.43□□□□□ -1.54
ATG4A-205ENST00000394892 REG3GQ6UW15 175 aa5.43□□□□□ -1.54
ATG4A-205ENST00000394892 Q8N8P6 123 aa5.43□□□□□ -1.54
ATG4A-205ENST00000394892 AMELXQ99217 191 aa5.43□□□□□ -1.54
ATG4A-205ENST00000394892 MRPL35Q9NZE8 188 aaKnown RBP5.43□□□□□ -1.54
ATG4A-205ENST00000394892 PSORS1C2Q9UIG4 136 aa5.43□□□□□ -1.54
ATG4A-205ENST00000394892 MT-ND4LP03901 98 aa5.42□□□□□ -1.54
ATG4A-205ENST00000394892 RPL18AQ02543 176 aaKnown RBP5.42□□□□□ -1.54
ATG4A-205ENST00000394892 KIAA1644Q3SXP7 199 aa5.42□□□□□ -1.54
ATG4A-205ENST00000394892 C2orf82Q6UX34 121 aa5.42□□□□□ -1.54
ATG4A-205ENST00000394892 C2orf66Q6UXQ4 117 aa5.42□□□□□ -1.54
ATG4A-205ENST00000394892 LAMTOR2Q9Y2Q5 125 aa5.42□□□□□ -1.54
ATG4A-205ENST00000394892 TMEM218A2RU14 115 aa5.41□□□□□ -1.54
ATG4A-205ENST00000394892 TLX1NBP0CAT3 122 aa5.41□□□□□ -1.54
ATG4A-205ENST00000394892 RAB5AP20339 215 aa5.41□□□□□ -1.54
ATG4A-205ENST00000394892 IFI27P40305 119 aaPredicted RBP5.41□□□□□ -1.54
ATG4A-205ENST00000394892 SPINK6Q6UWN8 80 aa5.41□□□□□ -1.54
ATG4A-205ENST00000394892 TMEM141Q96I45 108 aa5.41□□□□□ -1.54
ATG4A-205ENST00000394892 MAP1LC3AQ9H492 121 aa5.41□□□□□ -1.54
ATG4A-205ENST00000394892 PKIGQ9Y2B9 76 aa5.41□□□□□ -1.54
ATG4A-205ENST00000394892 RAB14P61106 215 aa5.4□□□□□ -1.54
ATG4A-205ENST00000394892 C9orf129Q5T035 196 aaKnown RBP5.4□□□□□ -1.54
ATG4A-205ENST00000394892 FAM19A3Q7Z5A8 133 aa5.4□□□□□ -1.54
ATG4A-205ENST00000394892 IMMP2LQ96T52 175 aa5.4□□□□□ -1.54
ATG4A-205ENST00000394892 F8WDY8 70 aa5.39□□□□□ -1.55
ATG4A-205ENST00000394892 NDUFA1O15239 70 aa5.39□□□□□ -1.55
ATG4A-205ENST00000394892 GAGE2EQ4V326 116 aa5.39□□□□□ -1.55
ATG4A-205ENST00000394892 GAGE2DQ9UEU5 116 aa5.39□□□□□ -1.55
ATG4A-205ENST00000394892 CYSLTR1Q9Y271 337 aa5.39□□□□□ -1.55
ATG4A-205ENST00000394892 CHTOPQ9Y3Y2 248 aaKnown RBP5.39□□□□□ -1.55
ATG4A-205ENST00000394892 TGIF2-C20orf24A0A0A6YYL0 155 aa5.38□□□□□ -1.55
ATG4A-205ENST00000394892 TEX43Q6ZNM6 134 aa5.38□□□□□ -1.55
ATG4A-205ENST00000394892 LINC01561Q8N1V8 128 aa5.38□□□□□ -1.55
ATG4A-205ENST00000394892 LINC01546A6NGU7 62 aa5.37□□□□□ -1.55
ATG4A-205ENST00000394892 ORMDL2Q53FV1 153 aa5.37□□□□□ -1.55
ATG4A-205ENST00000394892 C1orf137Q5JT78 98 aa5.37□□□□□ -1.55
ATG4A-205ENST00000394892 C10orf91Q5T1B1 145 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms