RNA–Protein interactions for RNA: ENST00000380741.8

SMN2-201, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SMN2, Length 900 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-201ENST00000380741 MT-ND6P03923 174 aa10.35□□□□□ -0.75
SMN2-201ENST00000380741 PHF5AQ7RTV0 110 aaKnown RBP10.35□□□□□ -0.75
SMN2-201ENST00000380741 OR10D4PQ8NGN7 298 aa10.35□□□□□ -0.75
SMN2-201ENST00000380741 SMIM2Q9BVW6 85 aa10.35□□□□□ -0.75
SMN2-201ENST00000380741 A0A1B0GW15 77 aa10.34□□□□□ -0.75
SMN2-201ENST00000380741 D6R8Y8 96 aa10.34□□□□□ -0.75
SMN2-201ENST00000380741 TCAPO15273 167 aa10.34□□□□□ -0.75
SMN2-201ENST00000380741 SMCPP49901 116 aaPredicted RBP10.34□□□□□ -0.75
SMN2-201ENST00000380741 RNF151Q2KHN1 245 aa10.34□□□□□ -0.75
SMN2-201ENST00000380741 ORAOV1Q8WV07 137 aa10.34□□□□□ -0.75
SMN2-201ENST00000380741 IGHV3OR16-9A0A0B4J2B5 98 aa10.33□□□□□ -0.76
SMN2-201ENST00000380741 SRSF3P84103 164 aaKnown RBP10.33□□□□□ -0.76
SMN2-201ENST00000380741 MRPL54Q6P161 138 aaKnown RBP10.33□□□□□ -0.76
SMN2-201ENST00000380741 SPANXA1Q9NS26 97 aa10.33□□□□□ -0.76
SMN2-201ENST00000380741 MRPL35Q9NZE8 188 aaKnown RBP10.33□□□□□ -0.76
SMN2-201ENST00000380741 NPYP01303 97 aa10.32□□□□□ -0.76
SMN2-201ENST00000380741 C1orf137Q5JT78 98 aa10.32□□□□□ -0.76
SMN2-201ENST00000380741 IFITM10A6NMD0 228 aa10.31□□□□□ -0.76
SMN2-201ENST00000380741 HBBP68871 147 aa10.31□□□□□ -0.76
SMN2-201ENST00000380741 MRPS36P82909 103 aaKnown RBP10.31□□□□□ -0.76
SMN2-201ENST00000380741 C10orf25Q5T742 122 aa10.31□□□□□ -0.76
SMN2-201ENST00000380741 LPAP08519 4548 aa10.31□□□□□ -0.76
SMN2-201ENST00000380741 A0A1B0GXF2 115 aa10.3□□□□□ -0.76
SMN2-201ENST00000380741 F8W036 122 aa10.3□□□□□ -0.76
SMN2-201ENST00000380741 F8WDY8 70 aa10.3□□□□□ -0.76
SMN2-201ENST00000380741 NDUFA1O15239 70 aa10.3□□□□□ -0.76
SMN2-201ENST00000380741 S100A8P05109 93 aa10.3□□□□□ -0.76
SMN2-201ENST00000380741 IMMP2LQ96T52 175 aa10.3□□□□□ -0.76
SMN2-201ENST00000380741 FAM168BA1KXE4 195 aa10.29□□□□□ -0.76
SMN2-201ENST00000380741 PEA15Q15121 130 aa10.29□□□□□ -0.76
SMN2-201ENST00000380741 UNQ6190/PRO20217Q6UXQ8 127 aa10.28□□□□□ -0.76
SMN2-201ENST00000380741 C6orf48Q9UBA6 75 aa10.28□□□□□ -0.76
SMN2-201ENST00000380741 PPBPP02775 128 aa10.27□□□□□ -0.77
SMN2-201ENST00000380741 TLX1NBP0CAT3 122 aa10.27□□□□□ -0.77
SMN2-201ENST00000380741 SMDT1Q9H4I9 107 aa10.27□□□□□ -0.77
SMN2-201ENST00000380741 TGIF2-C20orf24A0A0A6YYL0 155 aa10.26□□□□□ -0.77
SMN2-201ENST00000380741 A0A1B0GVG6 124 aa10.26□□□□□ -0.77
SMN2-201ENST00000380741 IGLV7-43P04211 117 aa10.26□□□□□ -0.77
SMN2-201ENST00000380741 IFI27P40305 119 aaPredicted RBP10.26□□□□□ -0.77
SMN2-201ENST00000380741 KRTAP11-1Q8IUC1 163 aa10.26□□□□□ -0.77
SMN2-201ENST00000380741 ORMDL3Q8N138 153 aa10.26□□□□□ -0.77
SMN2-201ENST00000380741 A0A087WZ39 114 aa10.25□□□□□ -0.77
SMN2-201ENST00000380741 KIAA0087Q14695 138 aa10.25□□□□□ -0.77
SMN2-201ENST00000380741 GAGE2EQ4V326 116 aa10.25□□□□□ -0.77
SMN2-201ENST00000380741 FAM19A5Q7Z5A7 132 aaPredicted RBP10.25□□□□□ -0.77
SMN2-201ENST00000380741 GAGE2DQ9UEU5 116 aa10.25□□□□□ -0.77
SMN2-201ENST00000380741 IGLV4-3A0A075B6K6 122 aa10.24□□□□□ -0.77
SMN2-201ENST00000380741 RAB5AP20339 215 aa10.24□□□□□ -0.77
SMN2-201ENST00000380741 LINC00242Q5T6M2 205 aa10.24□□□□□ -0.77
SMN2-201ENST00000380741 TMEM136Q6ZRR5 245 aa10.24□□□□□ -0.77
SMN2-201ENST00000380741 DIRC1Q969H9 104 aa10.24□□□□□ -0.77
SMN2-201ENST00000380741 PRELID3AQ96N28 172 aa10.24□□□□□ -0.77
SMN2-201ENST00000380741 PYGO1Q9Y3Y4 419 aa10.24□□□□□ -0.77
SMN2-201ENST00000380741 ATP5L2Q7Z4Y8 100 aa10.23□□□□□ -0.77
SMN2-201ENST00000380741 KRTAP7-1Q8IUC3 87 aa10.23□□□□□ -0.77
SMN2-201ENST00000380741 PRR26Q8N8Z3 221 aa10.23□□□□□ -0.77
SMN2-201ENST00000380741 H0Y9J4 135 aa10.21□□□□□ -0.77
SMN2-201ENST00000380741 LCE2BO14633 110 aa10.21□□□□□ -0.77
SMN2-201ENST00000380741 C2orf82Q6UX34 121 aa10.21□□□□□ -0.77
SMN2-201ENST00000380741 TMEM141Q96I45 108 aa10.21□□□□□ -0.77
SMN2-201ENST00000380741 TRBV30A0A0K0K1B3 111 aa10.2□□□□□ -0.78
SMN2-201ENST00000380741 LOC389332A0A1B0GUA5 103 aa10.2□□□□□ -0.78
SMN2-201ENST00000380741 M0QXV9 152 aa10.2□□□□□ -0.78
SMN2-201ENST00000380741 PRSS47A8MTI9 375 aa10.19□□□□□ -0.78
SMN2-201ENST00000380741 UBE2D1P51668 147 aa10.19□□□□□ -0.78
SMN2-201ENST00000380741 TEX43Q6ZNM6 134 aa10.19□□□□□ -0.78
SMN2-201ENST00000380741 NDUFC2-KCTD14E9PQ53 114 aa10.18□□□□□ -0.78
SMN2-201ENST00000380741 UBE2BP63146 152 aa10.18□□□□□ -0.78
SMN2-201ENST00000380741 C9orf129Q5T035 196 aaKnown RBP10.18□□□□□ -0.78
SMN2-201ENST00000380741 ZC2HC1BQ5TFG8 222 aa10.18□□□□□ -0.78
SMN2-201ENST00000380741 MAP1LC3AQ9H492 121 aa10.18□□□□□ -0.78
SMN2-201ENST00000380741 LAMTOR2Q9Y2Q5 125 aa10.18□□□□□ -0.78
SMN2-201ENST00000380741 LINC00173Q6ZV60 143 aa10.17□□□□□ -0.78
SMN2-201ENST00000380741 PACRGQ96M98 296 aaPredicted RBP10.17□□□□□ -0.78
SMN2-201ENST00000380741 C2orf88Q9BSF0 95 aa10.17□□□□□ -0.78
SMN2-201ENST00000380741 KRTAP1-4P0C5Y4 121 aa10.16□□□□□ -0.78
SMN2-201ENST00000380741 C2orf66Q6UXQ4 117 aa10.16□□□□□ -0.78
SMN2-201ENST00000380741 LINC01561Q8N1V8 128 aa10.16□□□□□ -0.78
SMN2-201ENST00000380741 CYSLTR1Q9Y271 337 aa10.16□□□□□ -0.78
SMN2-201ENST00000380741 Q6ZN92 141 aa10.15□□□□□ -0.78
SMN2-201ENST00000380741 Q8N8P6 123 aa10.15□□□□□ -0.78
SMN2-201ENST00000380741 AMELXQ99217 191 aa10.15□□□□□ -0.78
SMN2-201ENST00000380741 IGLV1-50A0A075B6I6 118 aa10.14□□□□□ -0.79
SMN2-201ENST00000380741 VCX2Q9H322 139 aa10.13□□□□□ -0.79
SMN2-201ENST00000380741 TOMM7Q9P0U1 55 aa10.13□□□□□ -0.79
SMN2-201ENST00000380741 PRSS2P07478 247 aa10.12□□□□□ -0.79
SMN2-201ENST00000380741 ORMDL2Q53FV1 153 aa10.12□□□□□ -0.79
SMN2-201ENST00000380741 IGIPA6NJ69 53 aa10.11□□□□□ -0.79
SMN2-201ENST00000380741 NPSP0C0P6 89 aa10.11□□□□□ -0.79
SMN2-201ENST00000380741 CKS1BP61024 79 aa10.11□□□□□ -0.79
SMN2-201ENST00000380741 PNRC1Q12796 327 aaPredicted RBP10.11□□□□□ -0.79
SMN2-201ENST00000380741 LINC00469Q8N7U9 141 aa10.11□□□□□ -0.79
SMN2-201ENST00000380741 ANAPC16Q96DE5 110 aa10.11□□□□□ -0.79
SMN2-201ENST00000380741 MT-ND4LP03901 98 aa10.1□□□□□ -0.79
SMN2-201ENST00000380741 C6orf226Q5I0X4 101 aa10.1□□□□□ -0.79
SMN2-201ENST00000380741 FAM19A3Q7Z5A8 133 aa10.1□□□□□ -0.79
SMN2-201ENST00000380741 Q8IZM0 81 aa10.1□□□□□ -0.79
SMN2-201ENST00000380741 K7EMI3 77 aa10.09□□□□□ -0.79
SMN2-201ENST00000380741 ALKBH7Q9BT30 221 aaPredicted RBP10.09□□□□□ -0.79
SMN2-201ENST00000380741 XAGE1AQ9HD64 81 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms