RNA–Protein interactions for RNA: ENST00000358994.8

PTPA-206, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPA, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-206ENST00000358994 OVOL2Q9BRP0 275 aa12.91□□□□□ -0.34
PTPA-206ENST00000358994 C11orf72Q8NBR9 251 aa12.91□□□□□ -0.34
PTPA-206ENST00000358994 MIR7-3HGQ8N6C7 128 aa12.9□□□□□ -0.34
PTPA-206ENST00000358994 SND1-IT1Q9HBX3 110 aa12.9□□□□□ -0.34
PTPA-206ENST00000358994 NCR3O14931 201 aa12.9□□□□□ -0.34
PTPA-206ENST00000358994 DEFB131AP59861 70 aa12.9□□□□□ -0.34
PTPA-206ENST00000358994 Q5XG85 94 aa12.9□□□□□ -0.34
PTPA-206ENST00000358994 LECT2O14960 151 aa12.87□□□□□ -0.35
PTPA-206ENST00000358994 NTM-AS1Q6ZSK4 140 aa12.87□□□□□ -0.35
PTPA-206ENST00000358994 CDC42SE2Q9NRR3 84 aa12.87□□□□□ -0.35
PTPA-206ENST00000358994 A8MTW9 85 aa12.86□□□□□ -0.35
PTPA-206ENST00000358994 FHL2Q14192 279 aa12.86□□□□□ -0.35
PTPA-206ENST00000358994 HELZ2Q9BYK8 2649 aaKnown RBP12.86□□□□□ -0.35
PTPA-206ENST00000358994 CSPG4Q6UVK1 2322 aa12.86□□□□□ -0.35
PTPA-206ENST00000358994 IGHV4-61A0A0C4DH41 118 aa12.86□□□□□ -0.35
PTPA-206ENST00000358994 H0YGX0 51 aa12.86□□□□□ -0.35
PTPA-206ENST00000358994 HRCT1Q6UXD1 115 aa12.86□□□□□ -0.35
PTPA-206ENST00000358994 CENPEQ02224 2701 aa12.86□□□□□ -0.35
PTPA-206ENST00000358994 SLPIP03973 132 aa12.85□□□□□ -0.35
PTPA-206ENST00000358994 TMEM89A2RUT3 159 aa12.85□□□□□ -0.35
PTPA-206ENST00000358994 HILS1P60008 231 aa12.85□□□□□ -0.35
PTPA-206ENST00000358994 HIVEP3Q5T1R4 2406 aa12.84□□□□□ -0.35
PTPA-206ENST00000358994 SS18Q15532 418 aa12.84□□□□□ -0.35
PTPA-206ENST00000358994 MAP1AP78559 2803 aaPredicted RBP12.83□□□□□ -0.36
PTPA-206ENST00000358994 CCL18P55774 89 aa12.83□□□□□ -0.36
PTPA-206ENST00000358994 LRRK2Q5S007 2527 aa12.82□□□□□ -0.36
PTPA-206ENST00000358994 RPL36AP83881 106 aaKnown RBP12.82□□□□□ -0.36
PTPA-206ENST00000358994 COX7B2Q8TF08 81 aa12.82□□□□□ -0.36
PTPA-206ENST00000358994 RPL36ALQ969Q0 106 aaKnown RBP12.82□□□□□ -0.36
PTPA-206ENST00000358994 GCN1Q92616 2671 aaKnown RBP12.82□□□□□ -0.36
PTPA-206ENST00000358994 C2CD3Q4AC94 2353 aa12.81□□□□□ -0.36
PTPA-206ENST00000358994 TENM4Q6N022 2769 aa12.81□□□□□ -0.36
PTPA-206ENST00000358994 UCNP55089 124 aa12.81□□□□□ -0.36
PTPA-206ENST00000358994 LINC00158P58513 81 aa12.81□□□□□ -0.36
PTPA-206ENST00000358994 WFDC9Q8NEX5 89 aa12.81□□□□□ -0.36
PTPA-206ENST00000358994 TOMM7Q9P0U1 55 aa12.81□□□□□ -0.36
PTPA-206ENST00000358994 C10orf105Q8TEF2 133 aa12.8□□□□□ -0.36
PTPA-206ENST00000358994 CCKP06307 115 aa12.8□□□□□ -0.36
PTPA-206ENST00000358994 USP9XQ93008 2570 aaPredicted RBP12.8□□□□□ -0.36
PTPA-206ENST00000358994 GHRHP01286 108 aa12.79□□□□□ -0.36
PTPA-206ENST00000358994 CSMD2Q7Z408 3487 aa12.79□□□□□ -0.36
PTPA-206ENST00000358994 AVPP01185 164 aa12.78□□□□□ -0.36
PTPA-206ENST00000358994 TRAV23DV6A0A075B6W5 121 aa12.77□□□□□ -0.36
PTPA-206ENST00000358994 IGHV4-59P01825 116 aa12.77□□□□□ -0.37
PTPA-206ENST00000358994 ORMDL1Q9P0S3 153 aa12.77□□□□□ -0.37
PTPA-206ENST00000358994 FAM19A1Q7Z5A9 133 aa12.76□□□□□ -0.37
PTPA-206ENST00000358994 K7EQD1 137 aa12.75□□□□□ -0.37
PTPA-206ENST00000358994 TRGV1A0A0A0MS02 117 aa12.75□□□□□ -0.37
PTPA-206ENST00000358994 NDUFC2O95298 119 aa12.75□□□□□ -0.37
PTPA-206ENST00000358994 NBPF19A0A087WUL8 3843 aa12.75□□□□□ -0.37
PTPA-206ENST00000358994 NDUFC2-KCTD14E9PQ53 114 aa12.75□□□□□ -0.37
PTPA-206ENST00000358994 INSP01308 110 aa12.75□□□□□ -0.37
PTPA-206ENST00000358994 PFN2P35080 140 aa12.75□□□□□ -0.37
PTPA-206ENST00000358994 PAX4O43316 350 aa12.74□□□□□ -0.37
PTPA-206ENST00000358994 SLURP1P55000 103 aa12.74□□□□□ -0.37
PTPA-206ENST00000358994 MAP6D1Q9H9H5 199 aa12.74□□□□□ -0.37
PTPA-206ENST00000358994 TRBV10-1A0A0K0K1A3 114 aa12.73□□□□□ -0.37
PTPA-206ENST00000358994 ENHOQ6UWT2 76 aa12.73□□□□□ -0.37
PTPA-206ENST00000358994 UBE2L6O14933 153 aa12.73□□□□□ -0.37
PTPA-206ENST00000358994 C20orf197Q8N268 126 aa12.73□□□□□ -0.37
PTPA-206ENST00000358994 IGKV3OR2-268A0A0C4DH90 116 aa12.72□□□□□ -0.37
PTPA-206ENST00000358994 DEFB136Q30KP8 78 aa12.72□□□□□ -0.37
PTPA-206ENST00000358994 S100A7L2Q5SY68 101 aa12.72□□□□□ -0.37
PTPA-206ENST00000358994 XCL2Q9UBD3 114 aa12.72□□□□□ -0.37
PTPA-206ENST00000358994 IBA57-AS1B1ANH7 110 aa12.72□□□□□ -0.37
PTPA-206ENST00000358994 TMEM243Q9BU79 118 aa12.72□□□□□ -0.37
PTPA-206ENST00000358994 ATP5EP2Q5VTU8 51 aa12.71□□□□□ -0.37
PTPA-206ENST00000358994 LYPD5Q6UWN5 251 aa12.71□□□□□ -0.37
PTPA-206ENST00000358994 C18orf65Q6ZTR6 163 aa12.71□□□□□ -0.37
PTPA-206ENST00000358994 TRBV6-4A0A1B0GX49 114 aa12.71□□□□□ -0.38
PTPA-206ENST00000358994 LY6G6DO95868 133 aa12.71□□□□□ -0.38
PTPA-206ENST00000358994 MSMBP08118 114 aa12.71□□□□□ -0.38
PTPA-206ENST00000358994 HECTD1Q9ULT8 2610 aa12.7□□□□□ -0.38
PTPA-206ENST00000358994 DEFB112Q30KQ8 113 aa12.7□□□□□ -0.38
PTPA-206ENST00000358994 Q6ZTI0 123 aa12.7□□□□□ -0.38
PTPA-206ENST00000358994 FLNBO75369 2602 aaKnown RBP12.7□□□□□ -0.38
PTPA-206ENST00000358994 C19orf84I3L1E1 186 aa12.7□□□□□ -0.38
PTPA-206ENST00000358994 IL17DQ8TAD2 202 aa12.7□□□□□ -0.38
PTPA-206ENST00000358994 UBE2E2Q96LR5 201 aa12.7□□□□□ -0.38
PTPA-206ENST00000358994 CELSR2Q9HCU4 2923 aa12.69□□□□□ -0.38
PTPA-206ENST00000358994 SPG11Q96JI7 2443 aa12.69□□□□□ -0.38
PTPA-206ENST00000358994 XCL1P47992 114 aa12.69□□□□□ -0.38
PTPA-206ENST00000358994 LINC00167Q96N53 147 aa12.69□□□□□ -0.38
PTPA-206ENST00000358994 IGHV4-30-2A0A087WSY4 118 aa12.68□□□□□ -0.38
PTPA-206ENST00000358994 IGHV3OR16-9A0A0B4J2B5 98 aa12.68□□□□□ -0.38
PTPA-206ENST00000358994 JMJD7-PLA2G4BH0Y9G9 81 aa12.68□□□□□ -0.38
PTPA-206ENST00000358994 FAM236DA0A1B0GTK5 79 aa12.68□□□□□ -0.38
PTPA-206ENST00000358994 FAM236CP0DP71 79 aa12.68□□□□□ -0.38
PTPA-206ENST00000358994 C1orf158Q8N1D5 194 aa12.68□□□□□ -0.38
PTPA-206ENST00000358994 ZNF843Q8N446 348 aa12.68□□□□□ -0.38
PTPA-206ENST00000358994 CUBNO60494 3623 aa12.66□□□□□ -0.38
PTPA-206ENST00000358994 NOTCH3Q9UM47 2321 aa12.66□□□□□ -0.38
PTPA-206ENST00000358994 EPM2AB3EWF7 344 aa12.66□□□□□ -0.38
PTPA-206ENST00000358994 IGLV4-60A0A075B6I1 120 aa12.65□□□□□ -0.38
PTPA-206ENST00000358994 A0A096LNT2 108 aa12.65□□□□□ -0.38
PTPA-206ENST00000358994 Q8N814 137 aa12.65□□□□□ -0.38
PTPA-206ENST00000358994 LOC100131303A0A0U1RQF7 123 aa12.65□□□□□ -0.39
PTPA-206ENST00000358994 H7BZZ5 65 aa12.65□□□□□ -0.39
PTPA-206ENST00000358994 MRAPQ8TCY5 172 aa12.65□□□□□ -0.39
PTPA-206ENST00000358994 TRBV10-3A0A0K0K1G6 114 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms