RNA–Protein interactions for RNA: ENST00000357654.7

BRCA1-203, Transcript of BRCA1, DNA repair associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRCA1, Length 7,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-203ENST00000357654 IGFL2Q6UWQ7 119 aa4.2□□□□□ -1.74
BRCA1-203ENST00000357654 MUC4Q99102 2169 aa4.19□□□□□ -1.74
BRCA1-203ENST00000357654 SMCR5Q8TEV8 140 aa4.19□□□□□ -1.74
BRCA1-203ENST00000357654 SIP14410 1827 aa4.19□□□□□ -1.74
BRCA1-203ENST00000357654 ZNF22P17026 224 aaPredicted RBP4.19□□□□□ -1.74
BRCA1-203ENST00000357654 COA6Q5JTJ3 125 aaKnown RBP4.19□□□□□ -1.74
BRCA1-203ENST00000357654 KIAA0087Q14695 138 aa4.19□□□□□ -1.74
BRCA1-203ENST00000357654 SPATA3Q8NHX4 192 aa4.19□□□□□ -1.74
BRCA1-203ENST00000357654 PSMG3-AS1Q96PY0 264 aa4.19□□□□□ -1.74
BRCA1-203ENST00000357654 ZNF524Q96C55 264 aa4.18□□□□□ -1.74
BRCA1-203ENST00000357654 ATP5EP2Q5VTU8 51 aa4.18□□□□□ -1.74
BRCA1-203ENST00000357654 FAM19A4Q96LR4 140 aa4.18□□□□□ -1.74
BRCA1-203ENST00000357654 FNDC1Q4ZHG4 1894 aaPredicted RBP4.18□□□□□ -1.74
BRCA1-203ENST00000357654 LINC00313P59037 77 aa4.18□□□□□ -1.74
BRCA1-203ENST00000357654 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.18□□□□□ -1.74
BRCA1-203ENST00000357654 TRBV7-7A0A0K0K1E9 115 aa4.18□□□□□ -1.74
BRCA1-203ENST00000357654 A8MTW9 85 aa4.18□□□□□ -1.74
BRCA1-203ENST00000357654 TDRG1Q3Y452 100 aa4.18□□□□□ -1.74
BRCA1-203ENST00000357654 IGLV6-57P01721 117 aa4.18□□□□□ -1.74
BRCA1-203ENST00000357654 Q6JHZ5 121 aa4.18□□□□□ -1.74
BRCA1-203ENST00000357654 CREBBPQ92793 2442 aa4.17□□□□□ -1.74
BRCA1-203ENST00000357654 FHL3Q13643 280 aa4.17□□□□□ -1.74
BRCA1-203ENST00000357654 Q8N6K4 173 aa4.17□□□□□ -1.74
BRCA1-203ENST00000357654 MUC7Q8TAX7 377 aa4.17□□□□□ -1.74
BRCA1-203ENST00000357654 RNASE8Q8TDE3 154 aaKnown RBP4.17□□□□□ -1.74
BRCA1-203ENST00000357654 A0A1W2PNU3 283 aaPredicted RBP4.17□□□□□ -1.74
BRCA1-203ENST00000357654 CDPF1Q6NVV7 123 aa4.17□□□□□ -1.74
BRCA1-203ENST00000357654 PHF5AQ7RTV0 110 aaKnown RBP4.17□□□□□ -1.74
BRCA1-203ENST00000357654 ZNF575Q86XF7 245 aa4.17□□□□□ -1.74
BRCA1-203ENST00000357654 MBD6Q96DN6 1003 aa4.17□□□□□ -1.74
BRCA1-203ENST00000357654 IGLV4-60A0A075B6I1 120 aa4.17□□□□□ -1.74
BRCA1-203ENST00000357654 M0QY20 66 aa4.17□□□□□ -1.74
BRCA1-203ENST00000357654 UQCRQO14949 82 aa4.17□□□□□ -1.74
BRCA1-203ENST00000357654 ANK1P16157 1881 aa4.17□□□□□ -1.74
BRCA1-203ENST00000357654 ATP5EP56381 51 aaPredicted RBP4.17□□□□□ -1.74
BRCA1-203ENST00000357654 C1orf64Q8NEQ6 169 aa4.17□□□□□ -1.74
BRCA1-203ENST00000357654 ODF3Q96PU9 254 aa4.17□□□□□ -1.74
BRCA1-203ENST00000357654 MRPS12O15235 138 aaKnown RBP4.17□□□□□ -1.74
BRCA1-203ENST00000357654 IGLV1-47P01700 117 aa4.17□□□□□ -1.74
BRCA1-203ENST00000357654 SCN10AQ9Y5Y9 1956 aa4.17□□□□□ -1.74
BRCA1-203ENST00000357654 NUPR1O60356 82 aa4.16□□□□□ -1.74
BRCA1-203ENST00000357654 NDUFC1O43677 76 aa4.16□□□□□ -1.74
BRCA1-203ENST00000357654 COX17Q14061 63 aa4.16□□□□□ -1.74
BRCA1-203ENST00000357654 TMEM131Q92545 1883 aa4.16□□□□□ -1.74
BRCA1-203ENST00000357654 NOTCH3Q9UM47 2321 aa4.16□□□□□ -1.74
BRCA1-203ENST00000357654 REV3LO60673 3130 aa4.16□□□□□ -1.74
BRCA1-203ENST00000357654 IGLV5-37A0A075B6J1 123 aa4.16□□□□□ -1.74
BRCA1-203ENST00000357654 EIF4EBP1Q13541 118 aaPredicted RBP4.16□□□□□ -1.74
BRCA1-203ENST00000357654 C22orf24Q9Y442 160 aa4.16□□□□□ -1.74
BRCA1-203ENST00000357654 WWC2-AS2Q96NR7 200 aa4.16□□□□□ -1.74
BRCA1-203ENST00000357654 C6orf48Q9UBA6 75 aa4.16□□□□□ -1.74
BRCA1-203ENST00000357654 PKDREJQ9NTG1 2253 aa4.16□□□□□ -1.74
BRCA1-203ENST00000357654 A0A0D9SG42 100 aa4.15□□□□□ -1.74
BRCA1-203ENST00000357654 EGFEM1PQ0D2K5 195 aa4.15□□□□□ -1.74
BRCA1-203ENST00000357654 LYPD5Q6UWN5 251 aa4.15□□□□□ -1.74
BRCA1-203ENST00000357654 MED13Q9UHV7 2174 aa4.15□□□□□ -1.74
BRCA1-203ENST00000357654 PRRC2AP48634 2157 aaKnown RBP4.15□□□□□ -1.74
BRCA1-203ENST00000357654 FAM167A-AS1Q96KT0 104 aa4.15□□□□□ -1.75
BRCA1-203ENST00000357654 BRCA2P51587 3418 aa4.15□□□□□ -1.75
BRCA1-203ENST00000357654 DSCAMO60469 2012 aa4.15□□□□□ -1.75
BRCA1-203ENST00000357654 FSTL3O95633 263 aa4.15□□□□□ -1.75
BRCA1-203ENST00000357654 BRWD1-AS2P59051 145 aa4.15□□□□□ -1.75
BRCA1-203ENST00000357654 Q6ZRU5 148 aa4.15□□□□□ -1.75
BRCA1-203ENST00000357654 CRIPAKQ8N1N5 446 aa4.15□□□□□ -1.75
BRCA1-203ENST00000357654 TSHBP01222 138 aa4.14□□□□□ -1.75
BRCA1-203ENST00000357654 C9orf129Q5T035 196 aaKnown RBP4.14□□□□□ -1.75
BRCA1-203ENST00000357654 Q8IZM0 81 aa4.14□□□□□ -1.75
BRCA1-203ENST00000357654 CSNK1G2-AS1Q8NCQ2 148 aa4.14□□□□□ -1.75
BRCA1-203ENST00000357654 TNRC6AQ8NDV7 1962 aaKnown RBP4.14□□□□□ -1.75
BRCA1-203ENST00000357654 A0A087WYN8 130 aa4.14□□□□□ -1.75
BRCA1-203ENST00000357654 NTM-AS1Q6ZSK4 140 aa4.14□□□□□ -1.75
BRCA1-203ENST00000357654 CENPFP49454 3210 aa4.14□□□□□ -1.75
BRCA1-203ENST00000357654 HELZP42694 1942 aaKnown RBP4.14□□□□□ -1.75
BRCA1-203ENST00000357654 C1orf147Q96MC9 270 aaPredicted RBP4.14□□□□□ -1.75
BRCA1-203ENST00000357654 FAM186AA6NE01 2351 aa4.13□□□□□ -1.75
BRCA1-203ENST00000357654 CRIPTQ9P021 101 aa4.13□□□□□ -1.75
BRCA1-203ENST00000357654 SRCAPQ6ZRS2 3230 aa4.13□□□□□ -1.75
BRCA1-203ENST00000357654 Q6ZRP5 223 aa4.13□□□□□ -1.75
BRCA1-203ENST00000357654 NRACQ8N912 160 aa4.13□□□□□ -1.75
BRCA1-203ENST00000357654 PLXNA3P51805 1871 aa4.13□□□□□ -1.75
BRCA1-203ENST00000357654 A0A087WVE0 104 aa4.13□□□□□ -1.75
BRCA1-203ENST00000357654 TANC2Q9HCD6 1990 aa4.13□□□□□ -1.75
BRCA1-203ENST00000357654 PCNX1Q96RV3 2341 aa4.13□□□□□ -1.75
BRCA1-203ENST00000357654 FBXL19-AS1Q494R0 122 aa4.13□□□□□ -1.75
BRCA1-203ENST00000357654 Q8N814 137 aa4.13□□□□□ -1.75
BRCA1-203ENST00000357654 TMEM254Q8TBM7 123 aa4.13□□□□□ -1.75
BRCA1-203ENST00000357654 HIGD1BQ9P298 99 aa4.13□□□□□ -1.75
BRCA1-203ENST00000357654 HIVEP2P31629 2446 aa4.12□□□□□ -1.75
BRCA1-203ENST00000357654 LINC00315P59091 139 aa4.12□□□□□ -1.75
BRCA1-203ENST00000357654 MAPKAPK5-AS1Q8N8E1 139 aa4.12□□□□□ -1.75
BRCA1-203ENST00000357654 RBM12B-AS1Q9P1G2 102 aa4.12□□□□□ -1.75
BRCA1-203ENST00000357654 TP73-AS1Q9UF72 201 aa4.12□□□□□ -1.75
BRCA1-203ENST00000357654 AVPP01185 164 aa4.12□□□□□ -1.75
BRCA1-203ENST00000357654 NLRC5Q86WI3 1866 aa4.12□□□□□ -1.75
BRCA1-203ENST00000357654 P0C879 139 aa4.12□□□□□ -1.75
BRCA1-203ENST00000357654 CDC42SE2Q9NRR3 84 aa4.12□□□□□ -1.75
BRCA1-203ENST00000357654 NCOA6Q14686 2063 aaPredicted RBP4.12□□□□□ -1.75
BRCA1-203ENST00000357654 PRR9Q5T870 116 aa4.11□□□□□ -1.75
BRCA1-203ENST00000357654 SMIM29Q86T20 159 aa4.11□□□□□ -1.75
BRCA1-203ENST00000357654 ZSWIM8A7E2V4 1837 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 197.5 ms