RNA–Protein interactions for RNA: ENST00000348749.9

CHRNA1-202, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA1, Length 1,984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-202ENST00000348749 RBMY1CP0DJD4 496 aa7.37□□□□□ -1.23
CHRNA1-202ENST00000348749 RBMY1FQ15415 496 aaKnown RBP7.37□□□□□ -1.23
CHRNA1-202ENST00000348749 S100A7L2Q5SY68 101 aa7.37□□□□□ -1.23
CHRNA1-202ENST00000348749 LINC00337Q8N6G1 96 aa7.37□□□□□ -1.23
CHRNA1-202ENST00000348749 IGKV2-28A0A075B6P5 120 aa7.37□□□□□ -1.23
CHRNA1-202ENST00000348749 IGKV2D-28P01615 120 aa7.37□□□□□ -1.23
CHRNA1-202ENST00000348749 ZNF843Q8N446 348 aa7.37□□□□□ -1.23
CHRNA1-202ENST00000348749 SMIM11BQ8TCY0 68 aa7.37□□□□□ -1.23
CHRNA1-202ENST00000348749 IGHV3-38A0A0C4DH36 116 aa7.36□□□□□ -1.23
CHRNA1-202ENST00000348749 KNCNA6PVL3 124 aa7.36□□□□□ -1.23
CHRNA1-202ENST00000348749 PRB1P04280 392 aa7.36□□□□□ -1.23
CHRNA1-202ENST00000348749 DOPEY2Q9Y3R5 2298 aa7.36□□□□□ -1.23
CHRNA1-202ENST00000348749 IGHV4-59P01825 116 aa7.35□□□□□ -1.23
CHRNA1-202ENST00000348749 CCKP06307 115 aa7.35□□□□□ -1.23
CHRNA1-202ENST00000348749 DEFB112Q30KQ8 113 aa7.35□□□□□ -1.23
CHRNA1-202ENST00000348749 SPTAN1Q13813 2472 aaKnown RBP7.35□□□□□ -1.23
CHRNA1-202ENST00000348749 AVPP01185 164 aa7.35□□□□□ -1.23
CHRNA1-202ENST00000348749 GHRHP01286 108 aa7.35□□□□□ -1.23
CHRNA1-202ENST00000348749 LINC01356Q8N9X3 169 aa7.35□□□□□ -1.23
CHRNA1-202ENST00000348749 SND1-IT1Q9HBX3 110 aa7.35□□□□□ -1.23
CHRNA1-202ENST00000348749 LYPD5Q6UWN5 251 aa7.34□□□□□ -1.23
CHRNA1-202ENST00000348749 TRBV10-3A0A0K0K1G6 114 aa7.33□□□□□ -1.24
CHRNA1-202ENST00000348749 RBMY1BA6NDE4 496 aaKnown RBP7.33□□□□□ -1.24
CHRNA1-202ENST00000348749 RBMY1EA6NEQ0 496 aaKnown RBP7.33□□□□□ -1.24
CHRNA1-202ENST00000348749 BCE1O60756 84 aa7.33□□□□□ -1.24
CHRNA1-202ENST00000348749 RBMY1DP0C7P1 496 aaKnown RBP7.33□□□□□ -1.24
CHRNA1-202ENST00000348749 GNLYP22749 145 aa7.33□□□□□ -1.24
CHRNA1-202ENST00000348749 DEFB131AP59861 70 aa7.33□□□□□ -1.24
CHRNA1-202ENST00000348749 C11orf72Q8NBR9 251 aa7.33□□□□□ -1.24
CHRNA1-202ENST00000348749 SERP1Q9Y6X1 66 aa7.33□□□□□ -1.24
CHRNA1-202ENST00000348749 FAM236DA0A1B0GTK5 79 aa7.33□□□□□ -1.24
CHRNA1-202ENST00000348749 NCR3O14931 201 aa7.33□□□□□ -1.24
CHRNA1-202ENST00000348749 LECT2O14960 151 aa7.33□□□□□ -1.24
CHRNA1-202ENST00000348749 FAM236CP0DP71 79 aa7.33□□□□□ -1.24
CHRNA1-202ENST00000348749 PFN2P35080 140 aa7.33□□□□□ -1.24
CHRNA1-202ENST00000348749 MIR7-3HGQ8N6C7 128 aa7.33□□□□□ -1.24
CHRNA1-202ENST00000348749 TMEM243Q9BU79 118 aa7.33□□□□□ -1.24
CHRNA1-202ENST00000348749 PRO0628Q9UI54 55 aa7.33□□□□□ -1.24
CHRNA1-202ENST00000348749 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.32□□□□□ -1.24
CHRNA1-202ENST00000348749 TRBV10-1A0A0K0K1A3 114 aa7.32□□□□□ -1.24
CHRNA1-202ENST00000348749 INSP01308 110 aa7.32□□□□□ -1.24
CHRNA1-202ENST00000348749 SS18Q15532 418 aa7.32□□□□□ -1.24
CHRNA1-202ENST00000348749 C10orf99Q6UWK7 81 aa7.32□□□□□ -1.24
CHRNA1-202ENST00000348749 HTN1P15515 57 aa7.31□□□□□ -1.24
CHRNA1-202ENST00000348749 HILS1P60008 231 aa7.31□□□□□ -1.24
CHRNA1-202ENST00000348749 ZNF702PQ9H963 129 aa7.31□□□□□ -1.24
CHRNA1-202ENST00000348749 ORMDL1Q9P0S3 153 aa7.31□□□□□ -1.24
CHRNA1-202ENST00000348749 JMJD7-PLA2G4BH0Y9G9 81 aa7.31□□□□□ -1.24
CHRNA1-202ENST00000348749 XCL1P47992 114 aa7.31□□□□□ -1.24
CHRNA1-202ENST00000348749 Q96MF0 132 aa7.31□□□□□ -1.24
CHRNA1-202ENST00000348749 LINC00167Q96N53 147 aa7.31□□□□□ -1.24
CHRNA1-202ENST00000348749 CDC42SE2Q9NRR3 84 aa7.31□□□□□ -1.24
CHRNA1-202ENST00000348749 XCL2Q9UBD3 114 aa7.31□□□□□ -1.24
CHRNA1-202ENST00000348749 AKAP6Q13023 2319 aa7.31□□□□□ -1.24
CHRNA1-202ENST00000348749 TENM4Q6N022 2769 aa7.3□□□□□ -1.24
CHRNA1-202ENST00000348749 FSHBP01225 129 aa7.3□□□□□ -1.24
CHRNA1-202ENST00000348749 Q6YL49 198 aa7.3□□□□□ -1.24
CHRNA1-202ENST00000348749 LY6G6DO95868 133 aa7.29□□□□□ -1.24
CHRNA1-202ENST00000348749 COX7B2Q8TF08 81 aa7.29□□□□□ -1.24
CHRNA1-202ENST00000348749 MAP6D1Q9H9H5 199 aa7.29□□□□□ -1.24
CHRNA1-202ENST00000348749 ZNF462Q96JM2 2506 aa7.29□□□□□ -1.24
CHRNA1-202ENST00000348749 MYO18BQ8IUG5 2567 aa7.29□□□□□ -1.24
CHRNA1-202ENST00000348749 TRAV23DV6A0A075B6W5 121 aa7.29□□□□□ -1.24
CHRNA1-202ENST00000348749 CCL18P55774 89 aa7.29□□□□□ -1.24
CHRNA1-202ENST00000348749 RPL36AP83881 106 aaKnown RBP7.29□□□□□ -1.24
CHRNA1-202ENST00000348749 C20orf197Q8N268 126 aa7.29□□□□□ -1.24
CHRNA1-202ENST00000348749 IL17DQ8TAD2 202 aa7.29□□□□□ -1.24
CHRNA1-202ENST00000348749 RPL36ALQ969Q0 106 aaKnown RBP7.29□□□□□ -1.24
CHRNA1-202ENST00000348749 H7BZZ5 65 aa7.28□□□□□ -1.24
CHRNA1-202ENST00000348749 C4orf3Q8WVX3 66 aa7.28□□□□□ -1.24
CHRNA1-202ENST00000348749 TRAV7A0A075B6U4 112 aa7.28□□□□□ -1.24
CHRNA1-202ENST00000348749 A0A096LNT2 108 aa7.28□□□□□ -1.24
CHRNA1-202ENST00000348749 IBA57-AS1B1ANH7 110 aa7.28□□□□□ -1.24
CHRNA1-202ENST00000348749 PRM2P04554 102 aa7.28□□□□□ -1.24
CHRNA1-202ENST00000348749 NTM-AS1Q6ZSK4 140 aa7.28□□□□□ -1.24
CHRNA1-202ENST00000348749 FAM19A1Q7Z5A9 133 aa7.28□□□□□ -1.24
CHRNA1-202ENST00000348749 UNC79Q9P2D8 2635 aa7.27□□□□□ -1.25
CHRNA1-202ENST00000348749 SLPIP03973 132 aa7.27□□□□□ -1.25
CHRNA1-202ENST00000348749 SLURP1P55000 103 aa7.27□□□□□ -1.25
CHRNA1-202ENST00000348749 LINC00158P58513 81 aa7.27□□□□□ -1.25
CHRNA1-202ENST00000348749 ENHOQ6UWT2 76 aa7.27□□□□□ -1.25
CHRNA1-202ENST00000348749 KLKP1Q107X0 134 aa7.26□□□□□ -1.25
CHRNA1-202ENST00000348749 LINC00336Q6ZUF6 198 aa7.26□□□□□ -1.25
CHRNA1-202ENST00000348749 DYNLRB2Q8TF09 96 aa7.26□□□□□ -1.25
CHRNA1-202ENST00000348749 TRBV6-4A0A1B0GX49 114 aa7.26□□□□□ -1.25
CHRNA1-202ENST00000348749 K7EQD1 137 aa7.26□□□□□ -1.25
CHRNA1-202ENST00000348749 DEFB114Q30KQ6 69 aa7.26□□□□□ -1.25
CHRNA1-202ENST00000348749 WFDC9Q8NEX5 89 aa7.26□□□□□ -1.25
CHRNA1-202ENST00000348749 UBL5Q9BZL1 73 aa7.26□□□□□ -1.25
CHRNA1-202ENST00000348749 CFAP46Q8IYW2 2715 aa7.26□□□□□ -1.25
CHRNA1-202ENST00000348749 TMEM256-PLSCR3K7ERE1 68 aa7.25□□□□□ -1.25
CHRNA1-202ENST00000348749 SORL1Q92673 2214 aa7.25□□□□□ -1.25
CHRNA1-202ENST00000348749 HECTD1Q9ULT8 2610 aa7.25□□□□□ -1.25
CHRNA1-202ENST00000348749 SMIM26A0A096LP01 95 aa7.24□□□□□ -1.25
CHRNA1-202ENST00000348749 C16orf95Q9H693 158 aa7.24□□□□□ -1.25
CHRNA1-202ENST00000348749 RELNP78509 3460 aa7.24□□□□□ -1.25
CHRNA1-202ENST00000348749 PAX4O43316 350 aa7.23□□□□□ -1.25
CHRNA1-202ENST00000348749 CMC4P56277 68 aaPredicted RBP7.23□□□□□ -1.25
CHRNA1-202ENST00000348749 CSPG4Q6UVK1 2322 aa7.23□□□□□ -1.25
CHRNA1-202ENST00000348749 Q8N814 137 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms