RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 Q6ZUT4 128 aa7.82□□□□□ -1.16
SGCA-202ENST00000344627 C5orf38Q86SI9 138 aa7.82□□□□□ -1.16
SGCA-202ENST00000344627 C20orf78Q9BR46 151 aa7.82□□□□□ -1.16
SGCA-202ENST00000344627 UBR4Q5T4S7 5183 aa7.82□□□□□ -1.16
SGCA-202ENST00000344627 IGLV4-69A0A075B6H9 119 aa7.81□□□□□ -1.16
SGCA-202ENST00000344627 D6R8Y8 96 aa7.81□□□□□ -1.16
SGCA-202ENST00000344627 TCAPO15273 167 aa7.81□□□□□ -1.16
SGCA-202ENST00000344627 GAGE2BQ13066 116 aa7.81□□□□□ -1.16
SGCA-202ENST00000344627 ATP5L2Q7Z4Y8 100 aa7.81□□□□□ -1.16
SGCA-202ENST00000344627 CSDC2Q9Y534 153 aaKnown RBP7.81□□□□□ -1.16
SGCA-202ENST00000344627 RPL39P62891 51 aaKnown RBP7.8□□□□□ -1.16
SGCA-202ENST00000344627 CAMK2N2Q96S95 79 aa7.8□□□□□ -1.16
SGCA-202ENST00000344627 SMCO4Q9NRQ5 59 aa7.8□□□□□ -1.16
SGCA-202ENST00000344627 TRBV24-1A0A075B6N3 115 aa7.79□□□□□ -1.16
SGCA-202ENST00000344627 LOC107984640A0A0U1RRK4 108 aa7.79□□□□□ -1.16
SGCA-202ENST00000344627 APOMO95445 188 aa7.79□□□□□ -1.16
SGCA-202ENST00000344627 COX19Q49B96 90 aa7.79□□□□□ -1.16
SGCA-202ENST00000344627 LINC01600Q96MT4 127 aa7.79□□□□□ -1.16
SGCA-202ENST00000344627 TIMM21Q9BVV7 248 aa7.79□□□□□ -1.16
SGCA-202ENST00000344627 SMIM2Q9BVW6 85 aa7.79□□□□□ -1.16
SGCA-202ENST00000344627 NPYP01303 97 aa7.78□□□□□ -1.16
SGCA-202ENST00000344627 RAB5AP20339 215 aa7.78□□□□□ -1.16
SGCA-202ENST00000344627 RPL32P62910 135 aaKnown RBP7.78□□□□□ -1.16
SGCA-202ENST00000344627 REG3GQ6UW15 175 aa7.78□□□□□ -1.16
SGCA-202ENST00000344627 SPINK6Q6UWN8 80 aa7.78□□□□□ -1.16
SGCA-202ENST00000344627 A0A1B0GXF2 115 aa7.77□□□□□ -1.17
SGCA-202ENST00000344627 PPBPP02775 128 aa7.77□□□□□ -1.17
SGCA-202ENST00000344627 PRR3P79522 188 aaKnown RBP7.77□□□□□ -1.17
SGCA-202ENST00000344627 SPAG11BQ08648 103 aa7.77□□□□□ -1.17
SGCA-202ENST00000344627 TMEM136Q6ZRR5 245 aa7.77□□□□□ -1.17
SGCA-202ENST00000344627 ORMDL3Q8N138 153 aa7.77□□□□□ -1.17
SGCA-202ENST00000344627 PRELID3AQ96N28 172 aa7.77□□□□□ -1.17
SGCA-202ENST00000344627 TNXBP22105 4242 aa7.77□□□□□ -1.17
SGCA-202ENST00000344627 LOC389332A0A1B0GUA5 103 aa7.76□□□□□ -1.17
SGCA-202ENST00000344627 IFITM10A6NMD0 228 aa7.76□□□□□ -1.17
SGCA-202ENST00000344627 PTTG1IPP53801 180 aa7.76□□□□□ -1.17
SGCA-202ENST00000344627 RPL18AQ02543 176 aaKnown RBP7.76□□□□□ -1.17
SGCA-202ENST00000344627 ORAOV1Q8WV07 137 aa7.76□□□□□ -1.17
SGCA-202ENST00000344627 OPRPNQ99935 248 aaPredicted RBP7.76□□□□□ -1.17
SGCA-202ENST00000344627 SPANXA1Q9NS26 97 aa7.76□□□□□ -1.17
SGCA-202ENST00000344627 A0A0J9YXV3 536 aa7.75□□□□□ -1.17
SGCA-202ENST00000344627 SMCPP49901 116 aaPredicted RBP7.75□□□□□ -1.17
SGCA-202ENST00000344627 C2orf48Q96LS8 159 aa7.75□□□□□ -1.17
SGCA-202ENST00000344627 MT-ND6P03923 174 aa7.74□□□□□ -1.17
SGCA-202ENST00000344627 Q6ZRP5 223 aa7.74□□□□□ -1.17
SGCA-202ENST00000344627 IFI27P40305 119 aaPredicted RBP7.73□□□□□ -1.17
SGCA-202ENST00000344627 MRPS36P82909 103 aaKnown RBP7.73□□□□□ -1.17
SGCA-202ENST00000344627 OR10D4PQ8NGN7 298 aa7.73□□□□□ -1.17
SGCA-202ENST00000344627 MAP1LC3AQ9H492 121 aa7.73□□□□□ -1.17
SGCA-202ENST00000344627 TGIF2-C20orf24A0A0A6YYL0 155 aa7.72□□□□□ -1.17
SGCA-202ENST00000344627 A0A1W2PNN7 141 aa7.72□□□□□ -1.17
SGCA-202ENST00000344627 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.72□□□□□ -1.17
SGCA-202ENST00000344627 C9orf116Q5BN46 136 aaPredicted RBP7.72□□□□□ -1.17
SGCA-202ENST00000344627 IGHV3OR16-9A0A0B4J2B5 98 aa7.71□□□□□ -1.18
SGCA-202ENST00000344627 NDUFA1O15239 70 aa7.71□□□□□ -1.18
SGCA-202ENST00000344627 FAM104AQ969W3 186 aa7.71□□□□□ -1.18
SGCA-202ENST00000344627 GNB1LQ9BYB4 327 aa7.71□□□□□ -1.18
SGCA-202ENST00000344627 KRTAP10-8P60410 259 aa7.7□□□□□ -1.18
SGCA-202ENST00000344627 CBLN2Q8IUK8 224 aa7.7□□□□□ -1.18
SGCA-202ENST00000344627 TMEM141Q96I45 108 aa7.7□□□□□ -1.18
SGCA-202ENST00000344627 LAMTOR2Q9Y2Q5 125 aa7.7□□□□□ -1.18
SGCA-202ENST00000344627 IGLV4-3A0A075B6K6 122 aa7.69□□□□□ -1.18
SGCA-202ENST00000344627 SRSF9Q13242 221 aaKnown RBP eCLIP7.69□□□□□ -1.18
SGCA-202ENST00000344627 RNF151Q2KHN1 245 aa7.69□□□□□ -1.18
SGCA-202ENST00000344627 UNQ6190/PRO20217Q6UXQ8 127 aa7.69□□□□□ -1.18
SGCA-202ENST00000344627 Q6ZN92 141 aa7.69□□□□□ -1.18
SGCA-202ENST00000344627 TEX43Q6ZNM6 134 aa7.69□□□□□ -1.18
SGCA-202ENST00000344627 C2orf88Q9BSF0 95 aa7.69□□□□□ -1.18
SGCA-202ENST00000344627 MRPL35Q9NZE8 188 aaKnown RBP7.69□□□□□ -1.18
SGCA-202ENST00000344627 PYGO1Q9Y3Y4 419 aa7.69□□□□□ -1.18
SGCA-202ENST00000344627 F8WDY8 70 aa7.68□□□□□ -1.18
SGCA-202ENST00000344627 C10orf25Q5T742 122 aa7.68□□□□□ -1.18
SGCA-202ENST00000344627 PHF5AQ7RTV0 110 aaKnown RBP7.68□□□□□ -1.18
SGCA-202ENST00000344627 Q8N8P6 123 aa7.68□□□□□ -1.18
SGCA-202ENST00000344627 CYSLTR1Q9Y271 337 aa7.68□□□□□ -1.18
SGCA-202ENST00000344627 GAGE2EQ4V326 116 aa7.67□□□□□ -1.18
SGCA-202ENST00000344627 ZC2HC1BQ5TFG8 222 aa7.67□□□□□ -1.18
SGCA-202ENST00000344627 C2orf66Q6UXQ4 117 aa7.67□□□□□ -1.18
SGCA-202ENST00000344627 YPEL4Q96NS1 127 aa7.67□□□□□ -1.18
SGCA-202ENST00000344627 VCX2Q9H322 139 aa7.67□□□□□ -1.18
SGCA-202ENST00000344627 GAGE2DQ9UEU5 116 aa7.67□□□□□ -1.18
SGCA-202ENST00000344627 PSORS1C2Q9UIG4 136 aa7.67□□□□□ -1.18
SGCA-202ENST00000344627 A0A087WZ39 114 aa7.66□□□□□ -1.18
SGCA-202ENST00000344627 PRSS47A8MTI9 375 aa7.66□□□□□ -1.18
SGCA-202ENST00000344627 ORMDL2Q53FV1 153 aa7.66□□□□□ -1.18
SGCA-202ENST00000344627 C1orf137Q5JT78 98 aa7.66□□□□□ -1.18
SGCA-202ENST00000344627 LINC00242Q5T6M2 205 aa7.66□□□□□ -1.18
SGCA-202ENST00000344627 C6orf48Q9UBA6 75 aa7.66□□□□□ -1.18
SGCA-202ENST00000344627 TRAPPC1Q9Y5R8 145 aa7.66□□□□□ -1.18
SGCA-202ENST00000344627 PRSS2P07478 247 aa7.65□□□□□ -1.18
SGCA-202ENST00000344627 UBE2D1P51668 147 aa7.65□□□□□ -1.18
SGCA-202ENST00000344627 LRP2P98164 4655 aa7.65□□□□□ -1.18
SGCA-202ENST00000344627 FAM19A5Q7Z5A7 132 aaPredicted RBP7.65□□□□□ -1.18
SGCA-202ENST00000344627 PACRGQ96M98 296 aaPredicted RBP7.65□□□□□ -1.18
SGCA-202ENST00000344627 MRPL18Q9H0U6 180 aaKnown RBP7.65□□□□□ -1.18
SGCA-202ENST00000344627 TOMM7Q9P0U1 55 aa7.65□□□□□ -1.18
SGCA-202ENST00000344627 FAM168BA1KXE4 195 aa7.64□□□□□ -1.19
SGCA-202ENST00000344627 COLCA2A8K830 154 aa7.64□□□□□ -1.19
SGCA-202ENST00000344627 SCO1O75880 301 aa7.64□□□□□ -1.19
SGCA-202ENST00000344627 FABP9Q0Z7S8 132 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms