RNA–Protein interactions for RNA: ENST00000334352.8

USP16-201, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USP16, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-201ENST00000334352 SRRM2Q9UQ35 2752 aaKnown RBP3.91□□□□□ -1.78
USP16-201ENST00000334352 A0A1B0GV50 99 aa3.91□□□□□ -1.78
USP16-201ENST00000334352 TNFRSF6BO95407 300 aa3.91□□□□□ -1.78
USP16-201ENST00000334352 SEC11AP67812 179 aa3.91□□□□□ -1.78
USP16-201ENST00000334352 RNASEKQ6P5S7 137 aaKnown RBP3.91□□□□□ -1.78
USP16-201ENST00000334352 Q8N8P6 123 aa3.91□□□□□ -1.78
USP16-201ENST00000334352 DIRC1Q969H9 104 aa3.91□□□□□ -1.78
USP16-201ENST00000334352 TPPP3Q9BW30 176 aa3.91□□□□□ -1.78
USP16-201ENST00000334352 IGLV5-45A0A087WSX0 123 aa3.91□□□□□ -1.78
USP16-201ENST00000334352 NDUFA1O15239 70 aa3.91□□□□□ -1.78
USP16-201ENST00000334352 FCER1GP30273 86 aa3.91□□□□□ -1.78
USP16-201ENST00000334352 CXCL5P42830 114 aa3.91□□□□□ -1.78
USP16-201ENST00000334352 COX19Q49B96 90 aa3.91□□□□□ -1.78
USP16-201ENST00000334352 RPL13AP40429 203 aaKnown RBP3.9□□□□□ -1.78
USP16-201ENST00000334352 UBE2D1P51668 147 aa3.9□□□□□ -1.78
USP16-201ENST00000334352 CLPSL2Q6UWE3 100 aa3.9□□□□□ -1.78
USP16-201ENST00000334352 Q8IZM0 81 aa3.9□□□□□ -1.78
USP16-201ENST00000334352 TIMM17AQ99595 171 aa3.9□□□□□ -1.78
USP16-201ENST00000334352 H0Y9J4 135 aa3.9□□□□□ -1.79
USP16-201ENST00000334352 IGLV7-43P04211 117 aa3.9□□□□□ -1.79
USP16-201ENST00000334352 ORMDL2Q53FV1 153 aa3.9□□□□□ -1.79
USP16-201ENST00000334352 PAPPA-AS1Q5QFB9 102 aa3.9□□□□□ -1.79
USP16-201ENST00000334352 ALKAL2Q6UX46 152 aa3.9□□□□□ -1.79
USP16-201ENST00000334352 ORMDL3Q8N138 153 aa3.9□□□□□ -1.79
USP16-201ENST00000334352 EIF5A2Q9GZV4 153 aaKnown RBP3.9□□□□□ -1.79
USP16-201ENST00000334352 GAS8-AS1O95177 125 aa3.89□□□□□ -1.79
USP16-201ENST00000334352 CHTF8P0CG12 524 aa3.89□□□□□ -1.79
USP16-201ENST00000334352 LRP1Q07954 4544 aaKnown RBP3.89□□□□□ -1.79
USP16-201ENST00000334352 UQCC3Q6UW78 93 aa3.89□□□□□ -1.79
USP16-201ENST00000334352 Q6ZUT4 128 aa3.89□□□□□ -1.79
USP16-201ENST00000334352 TMEM141Q96I45 108 aa3.89□□□□□ -1.79
USP16-201ENST00000334352 CTDSP1Q9GZU7 261 aa3.89□□□□□ -1.79
USP16-201ENST00000334352 IGLV4-3A0A075B6K6 122 aa3.89□□□□□ -1.79
USP16-201ENST00000334352 A0A1W2PNN7 141 aa3.89□□□□□ -1.79
USP16-201ENST00000334352 IGIPA6NJ69 53 aa3.89□□□□□ -1.79
USP16-201ENST00000334352 XCL1P47992 114 aa3.89□□□□□ -1.79
USP16-201ENST00000334352 SPAG11BQ08648 103 aa3.89□□□□□ -1.79
USP16-201ENST00000334352 HIGD2BQ4VC39 106 aa3.89□□□□□ -1.79
USP16-201ENST00000334352 CAMK2N2Q96S95 79 aa3.89□□□□□ -1.79
USP16-201ENST00000334352 NXT2Q9NPJ8 142 aaKnown RBP3.89□□□□□ -1.79
USP16-201ENST00000334352 NDUFC2-KCTD14E9PQ53 114 aa3.88□□□□□ -1.79
USP16-201ENST00000334352 MALP21145 153 aa3.88□□□□□ -1.79
USP16-201ENST00000334352 C2orf66Q6UXQ4 117 aa3.88□□□□□ -1.79
USP16-201ENST00000334352 C9JQL5 133 aa3.88□□□□□ -1.79
USP16-201ENST00000334352 CKS2P33552 79 aa3.88□□□□□ -1.79
USP16-201ENST00000334352 FAM229BQ4G0N7 80 aa3.88□□□□□ -1.79
USP16-201ENST00000334352 LINC00242Q5T6M2 205 aa3.88□□□□□ -1.79
USP16-201ENST00000334352 SFTA2Q6UW10 78 aa3.88□□□□□ -1.79
USP16-201ENST00000334352 Q6ZN92 141 aa3.88□□□□□ -1.79
USP16-201ENST00000334352 LINC00173Q6ZV60 143 aa3.88□□□□□ -1.79
USP16-201ENST00000334352 TGIF2-C20orf24A0A0A6YYL0 155 aa3.87□□□□□ -1.79
USP16-201ENST00000334352 KRTAP1-4P0C5Y4 121 aa3.87□□□□□ -1.79
USP16-201ENST00000334352 LBHQ53QV2 105 aaPredicted RBP3.87□□□□□ -1.79
USP16-201ENST00000334352 PDZD11Q5EBL8 140 aa3.87□□□□□ -1.79
USP16-201ENST00000334352 PACRGQ96M98 296 aaPredicted RBP3.87□□□□□ -1.79
USP16-201ENST00000334352 C6orf48Q9UBA6 75 aa3.87□□□□□ -1.79
USP16-201ENST00000334352 IFI27P40305 119 aaPredicted RBP3.87□□□□□ -1.79
USP16-201ENST00000334352 HERVK_113P63121 156 aa3.87□□□□□ -1.79
USP16-201ENST00000334352 TOMM6Q96B49 74 aa3.87□□□□□ -1.79
USP16-201ENST00000334352 KRTAP7-1Q8IUC3 87 aa3.87□□□□□ -1.79
USP16-201ENST00000334352 C2orf88Q9BSF0 95 aa3.87□□□□□ -1.79
USP16-201ENST00000334352 MAP1LC3AQ9H492 121 aa3.87□□□□□ -1.79
USP16-201ENST00000334352 TINCRA0A1B0GVN0 87 aa3.86□□□□□ -1.79
USP16-201ENST00000334352 D6R8Y8 96 aa3.86□□□□□ -1.79
USP16-201ENST00000334352 NPYP01303 97 aa3.86□□□□□ -1.79
USP16-201ENST00000334352 C9orf116Q5BN46 136 aaPredicted RBP3.86□□□□□ -1.79
USP16-201ENST00000334352 C10orf91Q5T1B1 145 aa3.86□□□□□ -1.79
USP16-201ENST00000334352 ORAOV1Q8WV07 137 aa3.86□□□□□ -1.79
USP16-201ENST00000334352 PRELID3AQ96N28 172 aa3.86□□□□□ -1.79
USP16-201ENST00000334352 MT-ND6P03923 174 aa3.86□□□□□ -1.79
USP16-201ENST00000334352 CLLU1Q5K131 121 aa3.86□□□□□ -1.79
USP16-201ENST00000334352 KRTAP13-1Q8IUC0 172 aa3.86□□□□□ -1.79
USP16-201ENST00000334352 CYSLTR1Q9Y271 337 aa3.86□□□□□ -1.79
USP16-201ENST00000334352 MT-ND4LP03901 98 aa3.85□□□□□ -1.79
USP16-201ENST00000334352 TMEM136Q6ZRR5 245 aa3.85□□□□□ -1.79
USP16-201ENST00000334352 MRPL18Q9H0U6 180 aaKnown RBP3.85□□□□□ -1.79
USP16-201ENST00000334352 IFITM10A6NMD0 228 aa3.85□□□□□ -1.79
USP16-201ENST00000334352 ADIRFQ15847 76 aa3.85□□□□□ -1.79
USP16-201ENST00000334352 TEX43Q6ZNM6 134 aa3.85□□□□□ -1.79
USP16-201ENST00000334352 GNB1LQ9BYB4 327 aa3.84□□□□□ -1.79
USP16-201ENST00000334352 SMKR1H3BMG3 65 aa3.84□□□□□ -1.79
USP16-201ENST00000334352 ZNF861PO60384 105 aa3.84□□□□□ -1.79
USP16-201ENST00000334352 COX17Q14061 63 aa3.84□□□□□ -1.79
USP16-201ENST00000334352 C9orf129Q5T035 196 aaKnown RBP3.84□□□□□ -1.8
USP16-201ENST00000334352 ERASQ7Z444 233 aa3.84□□□□□ -1.8
USP16-201ENST00000334352 DMBT1Q9UGM3 2413 aaPredicted RBP3.83□□□□□ -1.8
USP16-201ENST00000334352 SRSF3P84103 164 aaKnown RBP3.83□□□□□ -1.8
USP16-201ENST00000334352 FA2HQ7L5A8 372 aa3.83□□□□□ -1.8
USP16-201ENST00000334352 IGKV2-24A0A0C4DH68 120 aa3.83□□□□□ -1.8
USP16-201ENST00000334352 IGLV5-39A0A0G2JS06 123 aa3.83□□□□□ -1.8
USP16-201ENST00000334352 LOC100996750A0A140TA64 210 aa3.83□□□□□ -1.8
USP16-201ENST00000334352 F8VRH5 84 aa3.83□□□□□ -1.8
USP16-201ENST00000334352 BCE1O60756 84 aa3.83□□□□□ -1.8
USP16-201ENST00000334352 RAB5AP20339 215 aa3.83□□□□□ -1.8
USP16-201ENST00000334352 GAGE2BQ13066 116 aa3.83□□□□□ -1.8
USP16-201ENST00000334352 DPH3Q96FX2 82 aa3.83□□□□□ -1.8
USP16-201ENST00000334352 ALKBH7Q9BT30 221 aaPredicted RBP3.83□□□□□ -1.8
USP16-201ENST00000334352 KRTAP4-6Q9BYQ5 205 aa3.83□□□□□ -1.8
USP16-201ENST00000334352 IGLC3P0DOY3 106 aa3.82□□□□□ -1.8
USP16-201ENST00000334352 RPL39P62891 51 aaKnown RBP3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 153.1 ms