RNA–Protein interactions for RNA: ENST00000327367.8

SMAD3-201, Transcript of SMAD family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD3, Length 6,247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-201ENST00000327367 UBE2D3P61077 147 aa12.02□□□□□ -0.48
SMAD3-201ENST00000327367 UBE2D2P62837 147 aa12.02□□□□□ -0.48
SMAD3-201ENST00000327367 IGIPA6NJ69 53 aa12.02□□□□□ -0.48
SMAD3-201ENST00000327367 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.02□□□□□ -0.48
SMAD3-201ENST00000327367 CDIP1Q9H305 208 aa12.02□□□□□ -0.49
SMAD3-201ENST00000327367 HCFC1P51610 2035 aa12.01□□□□□ -0.49
SMAD3-201ENST00000327367 NOTCH4Q99466 2003 aa12.01□□□□□ -0.49
SMAD3-201ENST00000327367 C18orf65Q6ZTR6 163 aa12.01□□□□□ -0.49
SMAD3-201ENST00000327367 ARHGAP32A7KAX9 2087 aa12.01□□□□□ -0.49
SMAD3-201ENST00000327367 IGHV6-1A0A0B4J1U7 121 aa12□□□□□ -0.49
SMAD3-201ENST00000327367 TNFRSF13BO14836 293 aaPredicted RBP12□□□□□ -0.49
SMAD3-201ENST00000327367 TANC1Q9C0D5 1861 aa12□□□□□ -0.49
SMAD3-201ENST00000327367 PRO0628Q9UI54 55 aa12□□□□□ -0.49
SMAD3-201ENST00000327367 PLAC8L1A1L4L8 177 aa11.99□□□□□ -0.49
SMAD3-201ENST00000327367 M0R2N4 97 aa11.99□□□□□ -0.49
SMAD3-201ENST00000327367 KIF26AQ9ULI4 1882 aaPredicted RBP11.99□□□□□ -0.49
SMAD3-201ENST00000327367 CYSRT1A8MQ03 144 aa11.99□□□□□ -0.49
SMAD3-201ENST00000327367 LINC00575Q6W349 94 aa11.99□□□□□ -0.49
SMAD3-201ENST00000327367 LINC00846Q9NV44 126 aa11.99□□□□□ -0.49
SMAD3-201ENST00000327367 C1orf137Q5JT78 98 aa11.98□□□□□ -0.49
SMAD3-201ENST00000327367 PIP4P1Q86T03 277 aa11.98□□□□□ -0.49
SMAD3-201ENST00000327367 LINC00574Q9H8X3 128 aa11.98□□□□□ -0.49
SMAD3-201ENST00000327367 TRBV10-3A0A0K0K1G6 114 aa11.98□□□□□ -0.49
SMAD3-201ENST00000327367 CDC42SE2Q9NRR3 84 aa11.98□□□□□ -0.49
SMAD3-201ENST00000327367 EDN2P20800 178 aa11.98□□□□□ -0.49
SMAD3-201ENST00000327367 UNQ6190/PRO20217Q6UXQ8 127 aa11.98□□□□□ -0.49
SMAD3-201ENST00000327367 A0A1W2PNU3 283 aaPredicted RBP11.97□□□□□ -0.49
SMAD3-201ENST00000327367 H0Y9P7 68 aa11.97□□□□□ -0.49
SMAD3-201ENST00000327367 CREBBPQ92793 2442 aa11.97□□□□□ -0.49
SMAD3-201ENST00000327367 ADAMTS9Q9P2N4 1935 aa11.97□□□□□ -0.49
SMAD3-201ENST00000327367 LINC00242Q5T6M2 205 aa11.97□□□□□ -0.49
SMAD3-201ENST00000327367 TMEM254Q8TBM7 123 aa11.97□□□□□ -0.49
SMAD3-201ENST00000327367 A8MTW9 85 aa11.97□□□□□ -0.49
SMAD3-201ENST00000327367 NBASA2RRP1 2371 aa11.96□□□□□ -0.49
SMAD3-201ENST00000327367 C10orf25Q5T742 122 aa11.96□□□□□ -0.5
SMAD3-201ENST00000327367 LMO4P61968 165 aa11.95□□□□□ -0.5
SMAD3-201ENST00000327367 RPL28P46779 137 aaKnown RBP11.95□□□□□ -0.5
SMAD3-201ENST00000327367 COX17Q14061 63 aa11.95□□□□□ -0.5
SMAD3-201ENST00000327367 SMIM1B2RUZ4 78 aa11.94□□□□□ -0.5
SMAD3-201ENST00000327367 Q8IZM0 81 aa11.93□□□□□ -0.5
SMAD3-201ENST00000327367 NUP210LQ5VU65 1888 aa11.93□□□□□ -0.5
SMAD3-201ENST00000327367 TMEM131Q92545 1883 aa11.92□□□□□ -0.5
SMAD3-201ENST00000327367 KLLNB2CW77 178 aa11.92□□□□□ -0.5
SMAD3-201ENST00000327367 ALPK3Q96L96 1907 aa11.92□□□□□ -0.5
SMAD3-201ENST00000327367 Q6YL49 198 aa11.91□□□□□ -0.5
SMAD3-201ENST00000327367 PRORYQ9H606 182 aa11.91□□□□□ -0.5
SMAD3-201ENST00000327367 Q8N6K4 173 aa11.91□□□□□ -0.5
SMAD3-201ENST00000327367 KPRPQ5T749 579 aaPredicted RBP11.9□□□□□ -0.5
SMAD3-201ENST00000327367 CIRBP-AS1Q8TBR5 109 aa11.9□□□□□ -0.5
SMAD3-201ENST00000327367 A0A096LNJ9 63 aa11.9□□□□□ -0.51
SMAD3-201ENST00000327367 C19orf84I3L1E1 186 aa11.89□□□□□ -0.51
SMAD3-201ENST00000327367 SBSPONQ8IVN8 264 aa11.89□□□□□ -0.51
SMAD3-201ENST00000327367 CHCHD7Q9BUK0 85 aa11.89□□□□□ -0.51
SMAD3-201ENST00000327367 WNK1Q9H4A3 2382 aa11.89□□□□□ -0.51
SMAD3-201ENST00000327367 C6orf223Q8N319 242 aa11.89□□□□□ -0.51
SMAD3-201ENST00000327367 KIAA1549LQ6ZVL6 1849 aa11.89□□□□□ -0.51
SMAD3-201ENST00000327367 IGLV4-60A0A075B6I1 120 aa11.89□□□□□ -0.51
SMAD3-201ENST00000327367 IGF2-ASQ6U949 168 aa11.89□□□□□ -0.51
SMAD3-201ENST00000327367 ZNF706Q9Y5V0 76 aaPredicted RBP11.89□□□□□ -0.51
SMAD3-201ENST00000327367 PLA2G2AP14555 144 aa11.88□□□□□ -0.51
SMAD3-201ENST00000327367 C7orf33Q8WU49 177 aa11.87□□□□□ -0.51
SMAD3-201ENST00000327367 DAZAP2Q15038 168 aaPredicted RBP11.87□□□□□ -0.51
SMAD3-201ENST00000327367 LELP1Q5T871 98 aa11.87□□□□□ -0.51
SMAD3-201ENST00000327367 PCNX3Q9H6A9 2034 aa11.86□□□□□ -0.51
SMAD3-201ENST00000327367 SMIM29Q86T20 159 aa11.85□□□□□ -0.51
SMAD3-201ENST00000327367 CNFNQ9BYD5 112 aa11.85□□□□□ -0.51
SMAD3-201ENST00000327367 A0A087WSZ3 146 aa11.85□□□□□ -0.51
SMAD3-201ENST00000327367 EML5Q05BV3 1969 aa11.84□□□□□ -0.51
SMAD3-201ENST00000327367 PRR14LQ5THK1 2151 aa11.84□□□□□ -0.51
SMAD3-201ENST00000327367 Q8NA96 180 aa11.84□□□□□ -0.51
SMAD3-201ENST00000327367 REG3GQ6UW15 175 aa11.84□□□□□ -0.51
SMAD3-201ENST00000327367 HCG22E2RYF7 251 aa11.83□□□□□ -0.51
SMAD3-201ENST00000327367 GPR179Q6PRD1 2367 aa11.83□□□□□ -0.52
SMAD3-201ENST00000327367 SPAG11AQ6PDA7 123 aa11.81□□□□□ -0.52
SMAD3-201ENST00000327367 Q9BRP9 147 aa11.81□□□□□ -0.52
SMAD3-201ENST00000327367 FSTL3O95633 263 aa11.81□□□□□ -0.52
SMAD3-201ENST00000327367 SMCPP49901 116 aaPredicted RBP11.81□□□□□ -0.52
SMAD3-201ENST00000327367 C1orf64Q8NEQ6 169 aa11.8□□□□□ -0.52
SMAD3-201ENST00000327367 Q6ZSN1 163 aa11.8□□□□□ -0.52
SMAD3-201ENST00000327367 ZNF702PQ9H963 129 aa11.8□□□□□ -0.52
SMAD3-201ENST00000327367 PSMG3-AS1Q96PY0 264 aa11.78□□□□□ -0.52
SMAD3-201ENST00000327367 MUC7Q8TAX7 377 aa11.77□□□□□ -0.52
SMAD3-201ENST00000327367 LINC00337Q8N6G1 96 aa11.77□□□□□ -0.53
SMAD3-201ENST00000327367 INAFM1C9JVW0 142 aa11.76□□□□□ -0.53
SMAD3-201ENST00000327367 TRAV10A0A0B4J240 114 aa11.76□□□□□ -0.53
SMAD3-201ENST00000327367 PRLHP81277 87 aa11.76□□□□□ -0.53
SMAD3-201ENST00000327367 AMELXQ99217 191 aa11.76□□□□□ -0.53
SMAD3-201ENST00000327367 MRGPRG-AS1Q2M3A8 158 aa11.75□□□□□ -0.53
SMAD3-201ENST00000327367 LIMD2Q9BT23 127 aa11.75□□□□□ -0.53
SMAD3-201ENST00000327367 ATG2AQ2TAZ0 1938 aa11.75□□□□□ -0.53
SMAD3-201ENST00000327367 SORL1Q92673 2214 aa11.74□□□□□ -0.53
SMAD3-201ENST00000327367 A0A1B0GU69 56 aa11.74□□□□□ -0.53
SMAD3-201ENST00000327367 hDV103S1A0JD37 113 aa11.74□□□□□ -0.53
SMAD3-201ENST00000327367 FSHBP01225 129 aa11.73□□□□□ -0.53
SMAD3-201ENST00000327367 IGLV8-61A0A075B6I0 122 aa11.72□□□□□ -0.53
SMAD3-201ENST00000327367 EGFEM1PQ0D2K5 195 aa11.72□□□□□ -0.53
SMAD3-201ENST00000327367 FBXL19-AS1Q494R0 122 aa11.72□□□□□ -0.53
SMAD3-201ENST00000327367 LINC01006Q8NI28 216 aa11.71□□□□□ -0.53
SMAD3-201ENST00000327367 RIF1Q5UIP0 2472 aaKnown RBP11.71□□□□□ -0.54
SMAD3-201ENST00000327367 CXCL6P80162 114 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms