RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 IGHV7-81A0A0B4J1V7 117 aa6.37□□□□□ -1.39
VAPB-201ENST00000265619 M0QY20 66 aa6.37□□□□□ -1.39
VAPB-201ENST00000265619 IGHV3-11P01762 117 aa6.37□□□□□ -1.39
VAPB-201ENST00000265619 C16orf95Q9H693 158 aa6.37□□□□□ -1.39
VAPB-201ENST00000265619 PROK1P58294 105 aa6.37□□□□□ -1.39
VAPB-201ENST00000265619 LY6G5BQ8NDX9 201 aa6.37□□□□□ -1.39
VAPB-201ENST00000265619 CD28P10747 220 aa6.36□□□□□ -1.39
VAPB-201ENST00000265619 RPL28P46779 137 aaKnown RBP6.36□□□□□ -1.39
VAPB-201ENST00000265619 APRG1Q8IVJ8 170 aa6.36□□□□□ -1.39
VAPB-201ENST00000265619 LINC00308Q8TCZ7 52 aa6.36□□□□□ -1.39
VAPB-201ENST00000265619 Q96MF0 132 aa6.36□□□□□ -1.39
VAPB-201ENST00000265619 NDUFC2O95298 119 aa6.36□□□□□ -1.39
VAPB-201ENST00000265619 PPP1R17O96001 155 aa6.36□□□□□ -1.39
VAPB-201ENST00000265619 MSMBP08118 114 aa6.36□□□□□ -1.39
VAPB-201ENST00000265619 MRPS36P82909 103 aaKnown RBP6.36□□□□□ -1.39
VAPB-201ENST00000265619 UNQ9165/PRO28630Q6UXU0 137 aa6.36□□□□□ -1.39
VAPB-201ENST00000265619 IGHV3-73A0A0B4J1V6 119 aa6.36□□□□□ -1.39
VAPB-201ENST00000265619 MRPL53Q96EL3 112 aaKnown RBP6.36□□□□□ -1.39
VAPB-201ENST00000265619 RNF5Q99942 180 aa6.36□□□□□ -1.39
VAPB-201ENST00000265619 TRBV12-3P01733 135 aa6.35□□□□□ -1.39
VAPB-201ENST00000265619 FP248Q71RG6 208 aaPredicted RBP6.35□□□□□ -1.39
VAPB-201ENST00000265619 ATP6V0E1O15342 81 aa6.35□□□□□ -1.39
VAPB-201ENST00000265619 PRIMA1Q86XR5 153 aa6.35□□□□□ -1.39
VAPB-201ENST00000265619 TRAV23DV6A0A075B6W5 121 aa6.34□□□□□ -1.39
VAPB-201ENST00000265619 A0A087WYN8 130 aa6.34□□□□□ -1.39
VAPB-201ENST00000265619 C20orf197Q8N268 126 aa6.34□□□□□ -1.39
VAPB-201ENST00000265619 CDKN2A-AS1Q9UH64 79 aa6.34□□□□□ -1.39
VAPB-201ENST00000265619 VPREB1P12018 145 aa6.34□□□□□ -1.39
VAPB-201ENST00000265619 PIK3CD-AS1Q5SR53 167 aa6.34□□□□□ -1.39
VAPB-201ENST00000265619 MRPL55Q7Z7F7 128 aaKnown RBP6.34□□□□□ -1.39
VAPB-201ENST00000265619 LINC00474Q9P2X8 69 aa6.34□□□□□ -1.39
VAPB-201ENST00000265619 TRBV6-5A0A0K0K1A5 114 aa6.34□□□□□ -1.39
VAPB-201ENST00000265619 NCR3O14931 201 aa6.34□□□□□ -1.39
VAPB-201ENST00000265619 BLCAPP62952 87 aa6.34□□□□□ -1.39
VAPB-201ENST00000265619 COX6A2Q02221 97 aa6.34□□□□□ -1.39
VAPB-201ENST00000265619 FAM19A1Q7Z5A9 133 aa6.34□□□□□ -1.39
VAPB-201ENST00000265619 UBE2D4Q9Y2X8 147 aa6.34□□□□□ -1.39
VAPB-201ENST00000265619 U3KQE9 123 aa6.34□□□□□ -1.39
VAPB-201ENST00000265619 TRAV12-2A0A075B6T6 113 aa6.33□□□□□ -1.4
VAPB-201ENST00000265619 J3QKU1 62 aa6.33□□□□□ -1.4
VAPB-201ENST00000265619 SOCS3O14543 225 aa6.33□□□□□ -1.4
VAPB-201ENST00000265619 LYPD5Q6UWN5 251 aa6.33□□□□□ -1.4
VAPB-201ENST00000265619 C9orf85Q96MD7 179 aa6.33□□□□□ -1.4
VAPB-201ENST00000265619 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.33□□□□□ -1.4
VAPB-201ENST00000265619 IGKV2-29A2NJV5 120 aaPredicted RBP6.33□□□□□ -1.4
VAPB-201ENST00000265619 ODF3BA8MYP8 253 aa6.33□□□□□ -1.4
VAPB-201ENST00000265619 B4DSR2 109 aa6.33□□□□□ -1.4
VAPB-201ENST00000265619 TMEM243Q9BU79 118 aa6.33□□□□□ -1.4
VAPB-201ENST00000265619 GHRHP01286 108 aa6.32□□□□□ -1.4
VAPB-201ENST00000265619 SLPIP03973 132 aa6.32□□□□□ -1.4
VAPB-201ENST00000265619 PRM2P04554 102 aa6.32□□□□□ -1.4
VAPB-201ENST00000265619 MED14OSP0DP75 135 aa6.32□□□□□ -1.4
VAPB-201ENST00000265619 Q6JHZ5 121 aa6.32□□□□□ -1.4
VAPB-201ENST00000265619 Q9H8V8 135 aa6.32□□□□□ -1.4
VAPB-201ENST00000265619 EPM2AB3EWF7 344 aa6.32□□□□□ -1.4
VAPB-201ENST00000265619 DNAL4O96015 105 aa6.32□□□□□ -1.4
VAPB-201ENST00000265619 IGHV4-59P01825 116 aa6.32□□□□□ -1.4
VAPB-201ENST00000265619 BRK1Q8WUW1 75 aa6.32□□□□□ -1.4
VAPB-201ENST00000265619 Q8N9W7 124 aa6.32□□□□□ -1.4
VAPB-201ENST00000265619 LENEPQ9Y5L5 61 aa6.32□□□□□ -1.4
VAPB-201ENST00000265619 DEFB112Q30KQ8 113 aa6.31□□□□□ -1.4
VAPB-201ENST00000265619 Q8N6K4 173 aa6.31□□□□□ -1.4
VAPB-201ENST00000265619 CD164Q04900 197 aa6.31□□□□□ -1.4
VAPB-201ENST00000265619 MINOS1Q5TGZ0 78 aa6.31□□□□□ -1.4
VAPB-201ENST00000265619 MINOS1-NBL1R4GNA1 71 aa6.31□□□□□ -1.4
VAPB-201ENST00000265619 H7BZZ5 65 aa6.3□□□□□ -1.4
VAPB-201ENST00000265619 INAFM2P0DMQ5 153 aa6.3□□□□□ -1.4
VAPB-201ENST00000265619 PMAIP1Q13794 54 aa6.3□□□□□ -1.4
VAPB-201ENST00000265619 C10orf99Q6UWK7 81 aa6.3□□□□□ -1.4
VAPB-201ENST00000265619 IGHV3-38A0A0C4DH36 116 aa6.3□□□□□ -1.4
VAPB-201ENST00000265619 XCL1P47992 114 aa6.3□□□□□ -1.4
VAPB-201ENST00000265619 DEFB113Q30KQ7 82 aa6.3□□□□□ -1.4
VAPB-201ENST00000265619 FAM222AQ5U5X8 452 aa6.3□□□□□ -1.4
VAPB-201ENST00000265619 XCL2Q9UBD3 114 aa6.3□□□□□ -1.4
VAPB-201ENST00000265619 PLA2G2AP14555 144 aa6.29□□□□□ -1.4
VAPB-201ENST00000265619 ZNF469Q96JG9 3925 aaPredicted RBP6.29□□□□□ -1.4
VAPB-201ENST00000265619 AKAP9Q99996 3911 aa6.29□□□□□ -1.4
VAPB-201ENST00000265619 IGHV3-16A0A0C4DH30 117 aa6.29□□□□□ -1.4
VAPB-201ENST00000265619 H3BS24 57 aa6.29□□□□□ -1.4
VAPB-201ENST00000265619 NDUFA1O15239 70 aa6.29□□□□□ -1.4
VAPB-201ENST00000265619 KNCNA6PVL3 124 aa6.29□□□□□ -1.4
VAPB-201ENST00000265619 KLLNB2CW77 178 aa6.29□□□□□ -1.4
VAPB-201ENST00000265619 SS18Q15532 418 aa6.29□□□□□ -1.4
VAPB-201ENST00000265619 Q6ZSN1 163 aa6.29□□□□□ -1.4
VAPB-201ENST00000265619 LINC00337Q8N6G1 96 aa6.29□□□□□ -1.4
VAPB-201ENST00000265619 LINC01356Q8N9X3 169 aa6.29□□□□□ -1.4
VAPB-201ENST00000265619 SNURFQ9Y675 71 aa6.29□□□□□ -1.4
VAPB-201ENST00000265619 F8P00451 2351 aa6.29□□□□□ -1.4
VAPB-201ENST00000265619 KMT2BQ9UMN6 2715 aaPredicted RBP6.29□□□□□ -1.4
VAPB-201ENST00000265619 LINC00482Q8N8I6 264 aa6.28□□□□□ -1.4
VAPB-201ENST00000265619 SETXQ7Z333 2677 aaKnown RBP6.28□□□□□ -1.4
VAPB-201ENST00000265619 TIMM17BO60830 172 aa6.28□□□□□ -1.4
VAPB-201ENST00000265619 ENHOQ6UWT2 76 aa6.28□□□□□ -1.4
VAPB-201ENST00000265619 LINC00467Q9BRT7 94 aa6.28□□□□□ -1.4
VAPB-201ENST00000265619 MOB4Q9Y3A3 225 aa6.28□□□□□ -1.4
VAPB-201ENST00000265619 SMR3AQ99954 134 aa6.28□□□□□ -1.4
VAPB-201ENST00000265619 CHCHD7Q9BUK0 85 aa6.28□□□□□ -1.4
VAPB-201ENST00000265619 RMI2Q96E14 147 aa6.27□□□□□ -1.41
VAPB-201ENST00000265619 NIPBLQ6KC79 2804 aaeCLIP6.27□□□□□ -1.41
VAPB-201ENST00000265619 IGKV2-28A0A075B6P5 120 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms