RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 LOC389332A0A1B0GUA5 103 aa10.08□□□□□ -0.8
USE1-201ENST00000263897 IFITM10A6NMD0 228 aa10.07□□□□□ -0.8
USE1-201ENST00000263897 IFI27P40305 119 aaPredicted RBP10.07□□□□□ -0.8
USE1-201ENST00000263897 PTTG1IPP53801 180 aa10.07□□□□□ -0.8
USE1-201ENST00000263897 MAP1LC3AQ9H492 121 aa10.07□□□□□ -0.8
USE1-201ENST00000263897 IFITM2Q01629 132 aa10.06□□□□□ -0.8
USE1-201ENST00000263897 GAGE2BQ13066 116 aa10.06□□□□□ -0.8
USE1-201ENST00000263897 UQCC3Q6UW78 93 aa10.06□□□□□ -0.8
USE1-201ENST00000263897 Q8N8P6 123 aa10.06□□□□□ -0.8
USE1-201ENST00000263897 OR10D4PQ8NGN7 298 aa10.06□□□□□ -0.8
USE1-201ENST00000263897 IMMP2LQ96T52 175 aa10.06□□□□□ -0.8
USE1-201ENST00000263897 PKHD1L1Q86WI1 4243 aa10.06□□□□□ -0.8
USE1-201ENST00000263897 IGLV4-3A0A075B6K6 122 aa10.05□□□□□ -0.8
USE1-201ENST00000263897 SPAG11BQ08648 103 aa10.05□□□□□ -0.8
USE1-201ENST00000263897 RNF151Q2KHN1 245 aa10.05□□□□□ -0.8
USE1-201ENST00000263897 SERTAD4-AS1Q5TG53 156 aa10.05□□□□□ -0.8
USE1-201ENST00000263897 TMEM218A2RU14 115 aa10.04□□□□□ -0.8
USE1-201ENST00000263897 F8WDY8 70 aa10.04□□□□□ -0.8
USE1-201ENST00000263897 ORAOV1Q8WV07 137 aa10.04□□□□□ -0.8
USE1-201ENST00000263897 TMEM141Q96I45 108 aa10.04□□□□□ -0.8
USE1-201ENST00000263897 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.03□□□□□ -0.8
USE1-201ENST00000263897 ADCYAP1P18509 176 aa10.03□□□□□ -0.8
USE1-201ENST00000263897 PRR3P79522 188 aaKnown RBP10.03□□□□□ -0.8
USE1-201ENST00000263897 LINC00242Q5T6M2 205 aa10.03□□□□□ -0.8
USE1-201ENST00000263897 CTDSP1Q9GZU7 261 aa10.03□□□□□ -0.8
USE1-201ENST00000263897 FAT3Q8TDW7 4589 aa10.02□□□□□ -0.8
USE1-201ENST00000263897 TGIF2-C20orf24A0A0A6YYL0 155 aa10.02□□□□□ -0.81
USE1-201ENST00000263897 A0A0J9YXV3 536 aa10.02□□□□□ -0.81
USE1-201ENST00000263897 K7EMI3 77 aa10.02□□□□□ -0.81
USE1-201ENST00000263897 C2orf66Q6UXQ4 117 aa10.02□□□□□ -0.81
USE1-201ENST00000263897 MRPL35Q9NZE8 188 aaKnown RBP10.02□□□□□ -0.81
USE1-201ENST00000263897 CYSLTR1Q9Y271 337 aa10.02□□□□□ -0.81
USE1-201ENST00000263897 A0A087WZ39 114 aa10.01□□□□□ -0.81
USE1-201ENST00000263897 A0A1W2PNN7 141 aa10.01□□□□□ -0.81
USE1-201ENST00000263897 MT1HL1P0DM35 61 aa10.01□□□□□ -0.81
USE1-201ENST00000263897 ORMDL2Q53FV1 153 aa10.01□□□□□ -0.81
USE1-201ENST00000263897 NXT2Q9NPJ8 142 aaKnown RBP10.01□□□□□ -0.81
USE1-201ENST00000263897 NDUFA1O15239 70 aa10□□□□□ -0.81
USE1-201ENST00000263897 UNQ6190/PRO20217Q6UXQ8 127 aa10□□□□□ -0.81
USE1-201ENST00000263897 TEX43Q6ZNM6 134 aa10□□□□□ -0.81
USE1-201ENST00000263897 TRAV9-1A0A075B6T8 112 aa9.99□□□□□ -0.81
USE1-201ENST00000263897 UBE2D1P51668 147 aa9.99□□□□□ -0.81
USE1-201ENST00000263897 RPL18AQ02543 176 aaKnown RBP9.99□□□□□ -0.81
USE1-201ENST00000263897 KIAA0087Q14695 138 aa9.99□□□□□ -0.81
USE1-201ENST00000263897 C9orf116Q5BN46 136 aaPredicted RBP9.99□□□□□ -0.81
USE1-201ENST00000263897 C10orf25Q5T742 122 aa9.99□□□□□ -0.81
USE1-201ENST00000263897 AMELXQ99217 191 aa9.99□□□□□ -0.81
USE1-201ENST00000263897 SEC11CQ9BY50 192 aa9.99□□□□□ -0.81
USE1-201ENST00000263897 VCX2Q9H322 139 aa9.99□□□□□ -0.81
USE1-201ENST00000263897 IGIPA6NJ69 53 aa9.98□□□□□ -0.81
USE1-201ENST00000263897 NPSP0C0P6 89 aa9.98□□□□□ -0.81
USE1-201ENST00000263897 KIAA1644Q3SXP7 199 aa9.98□□□□□ -0.81
USE1-201ENST00000263897 ZC2HC1BQ5TFG8 222 aa9.98□□□□□ -0.81
USE1-201ENST00000263897 Q6ZN92 141 aa9.98□□□□□ -0.81
USE1-201ENST00000263897 Q6ZRP5 223 aa9.98□□□□□ -0.81
USE1-201ENST00000263897 G0S2P27469 103 aa9.97□□□□□ -0.81
USE1-201ENST00000263897 LINC00173Q6ZV60 143 aa9.97□□□□□ -0.81
USE1-201ENST00000263897 LINC01561Q8N1V8 128 aa9.97□□□□□ -0.81
USE1-201ENST00000263897 C2orf88Q9BSF0 95 aa9.97□□□□□ -0.81
USE1-201ENST00000263897 TLX1NBP0CAT3 122 aa9.96□□□□□ -0.82
USE1-201ENST00000263897 SRSF9Q13242 221 aaKnown RBP eCLIP9.96□□□□□ -0.82
USE1-201ENST00000263897 SPINK6Q6UWN8 80 aa9.96□□□□□ -0.82
USE1-201ENST00000263897 C6orf48Q9UBA6 75 aa9.96□□□□□ -0.82
USE1-201ENST00000263897 S100PP25815 95 aa9.95□□□□□ -0.82
USE1-201ENST00000263897 FAM19A3Q7Z5A8 133 aa9.95□□□□□ -0.82
USE1-201ENST00000263897 GNB1LQ9BYB4 327 aa9.95□□□□□ -0.82
USE1-201ENST00000263897 PAPPA-AS1Q5QFB9 102 aa9.94□□□□□ -0.82
USE1-201ENST00000263897 COMMD7Q86VX2 200 aa9.94□□□□□ -0.82
USE1-201ENST00000263897 LINC01600Q96MT4 127 aa9.94□□□□□ -0.82
USE1-201ENST00000263897 C10orf91Q5T1B1 145 aa9.93□□□□□ -0.82
USE1-201ENST00000263897 TOMM6Q96B49 74 aa9.93□□□□□ -0.82
USE1-201ENST00000263897 TIMM17AQ99595 171 aa9.93□□□□□ -0.82
USE1-201ENST00000263897 TRBV30A0A0K0K1B3 111 aa9.92□□□□□ -0.82
USE1-201ENST00000263897 COX19Q49B96 90 aa9.92□□□□□ -0.82
USE1-201ENST00000263897 C2orf82Q6UX34 121 aa9.92□□□□□ -0.82
USE1-201ENST00000263897 PHF5AQ7RTV0 110 aaKnown RBP9.92□□□□□ -0.82
USE1-201ENST00000263897 ALKBH7Q9BT30 221 aaPredicted RBP9.92□□□□□ -0.82
USE1-201ENST00000263897 SEC11AP67812 179 aa9.91□□□□□ -0.82
USE1-201ENST00000263897 GAGE2EQ4V326 116 aa9.91□□□□□ -0.82
USE1-201ENST00000263897 ERASQ7Z444 233 aa9.91□□□□□ -0.82
USE1-201ENST00000263897 GAGE2DQ9UEU5 116 aa9.91□□□□□ -0.82
USE1-201ENST00000263897 PSORS1C2Q9UIG4 136 aa9.91□□□□□ -0.82
USE1-201ENST00000263897 PLA2G2DQ9UNK4 145 aa9.91□□□□□ -0.82
USE1-201ENST00000263897 FAM168BA1KXE4 195 aa9.9□□□□□ -0.82
USE1-201ENST00000263897 LINC01546A6NGU7 62 aa9.9□□□□□ -0.82
USE1-201ENST00000263897 HERVK_113P63121 156 aa9.9□□□□□ -0.82
USE1-201ENST00000263897 REG3GQ6UW15 175 aa9.9□□□□□ -0.82
USE1-201ENST00000263897 PACRGQ96M98 296 aaPredicted RBP9.9□□□□□ -0.82
USE1-201ENST00000263897 SCGB3A1Q96QR1 104 aa9.9□□□□□ -0.82
USE1-201ENST00000263897 CARHSP1Q9Y2V2 147 aaKnown RBP9.9□□□□□ -0.82
USE1-201ENST00000263897 MT-ND6P03923 174 aa9.89□□□□□ -0.83
USE1-201ENST00000263897 PRSS2P07478 247 aa9.89□□□□□ -0.83
USE1-201ENST00000263897 C6orf226Q5I0X4 101 aa9.89□□□□□ -0.83
USE1-201ENST00000263897 RPS10P5Q9NQ39 176 aa9.89□□□□□ -0.83
USE1-201ENST00000263897 TOMM7Q9P0U1 55 aa9.89□□□□□ -0.83
USE1-201ENST00000263897 CDKN2A-AS1Q9UH64 79 aa9.89□□□□□ -0.83
USE1-201ENST00000263897 LINC01549A6NIU2 74 aa9.88□□□□□ -0.83
USE1-201ENST00000263897 NDUFC2-KCTD14E9PQ53 114 aa9.88□□□□□ -0.83
USE1-201ENST00000263897 RHEBQ15382 184 aa9.88□□□□□ -0.83
USE1-201ENST00000263897 Q8IZM0 81 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms