RNA–Protein interactions for RNA: ENST00000263511.8

CROCCP3-201, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

TSL 1 (best) BASIC

Gene CROCCP3, Length 5,368 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-201ENST00000263511 UBE2D2P62837 147 aa12.31□□□□□ -0.44
CROCCP3-201ENST00000263511 C1orf158Q8N1D5 194 aa12.31□□□□□ -0.44
CROCCP3-201ENST00000263511 ODF3L2Q3SX64 289 aa12.31□□□□□ -0.44
CROCCP3-201ENST00000263511 UQCRQO14949 82 aa12.3□□□□□ -0.44
CROCCP3-201ENST00000263511 C2orf91Q6ZV80 131 aa12.3□□□□□ -0.44
CROCCP3-201ENST00000263511 TLN1Q9Y490 2541 aaKnown RBP12.3□□□□□ -0.44
CROCCP3-201ENST00000263511 SCXQ7RTU7 201 aa12.29□□□□□ -0.44
CROCCP3-201ENST00000263511 LINC00474Q9P2X8 69 aa12.29□□□□□ -0.44
CROCCP3-201ENST00000263511 PPDPFQ9H3Y8 114 aa12.28□□□□□ -0.44
CROCCP3-201ENST00000263511 SDIM1Q6ZPB5 146 aa12.28□□□□□ -0.44
CROCCP3-201ENST00000263511 Q6ZQY7 126 aa12.28□□□□□ -0.44
CROCCP3-201ENST00000263511 COX17Q14061 63 aa12.27□□□□□ -0.44
CROCCP3-201ENST00000263511 CRIP2P52943 208 aaPredicted RBP12.27□□□□□ -0.45
CROCCP3-201ENST00000263511 MUC7Q8TAX7 377 aa12.27□□□□□ -0.45
CROCCP3-201ENST00000263511 IGLV1-51P01701 117 aa12.27□□□□□ -0.45
CROCCP3-201ENST00000263511 TANC2Q9HCD6 1990 aa12.26□□□□□ -0.45
CROCCP3-201ENST00000263511 Q8IZM0 81 aa12.26□□□□□ -0.45
CROCCP3-201ENST00000263511 CDC42SE2Q9NRR3 84 aa12.26□□□□□ -0.45
CROCCP3-201ENST00000263511 CNFNQ9BYD5 112 aa12.26□□□□□ -0.45
CROCCP3-201ENST00000263511 ENHOQ6UWT2 76 aa12.25□□□□□ -0.45
CROCCP3-201ENST00000263511 NUPR2A6NF83 97 aa12.25□□□□□ -0.45
CROCCP3-201ENST00000263511 WFDC10BQ8IUB3 73 aa12.24□□□□□ -0.45
CROCCP3-201ENST00000263511 JMJD1CQ15652 2540 aa12.24□□□□□ -0.45
CROCCP3-201ENST00000263511 SPINK6Q6UWN8 80 aa12.24□□□□□ -0.45
CROCCP3-201ENST00000263511 C20orf197Q8N268 126 aa12.24□□□□□ -0.45
CROCCP3-201ENST00000263511 CHCHD7Q9BUK0 85 aa12.24□□□□□ -0.45
CROCCP3-201ENST00000263511 C3orf84H3BNL1 204 aa12.23□□□□□ -0.45
CROCCP3-201ENST00000263511 C3orf22Q8N5N4 141 aa12.23□□□□□ -0.45
CROCCP3-201ENST00000263511 RPL37AP8A6NKH3 93 aa12.23□□□□□ -0.45
CROCCP3-201ENST00000263511 CYSRT1A8MQ03 144 aa12.22□□□□□ -0.45
CROCCP3-201ENST00000263511 ZNF73O43830 326 aaPredicted RBP12.22□□□□□ -0.45
CROCCP3-201ENST00000263511 EDN2P20800 178 aa12.22□□□□□ -0.45
CROCCP3-201ENST00000263511 C16orf95Q9H693 158 aa12.22□□□□□ -0.45
CROCCP3-201ENST00000263511 ARHGAP32A7KAX9 2087 aa12.22□□□□□ -0.45
CROCCP3-201ENST00000263511 PLAC8L1A1L4L8 177 aa12.22□□□□□ -0.45
CROCCP3-201ENST00000263511 LINC00310P59036 64 aa12.22□□□□□ -0.45
CROCCP3-201ENST00000263511 BRK1Q8WUW1 75 aa12.21□□□□□ -0.45
CROCCP3-201ENST00000263511 A0A1W2PPR1 153 aa12.21□□□□□ -0.45
CROCCP3-201ENST00000263511 MRPS12O15235 138 aaKnown RBP12.21□□□□□ -0.45
CROCCP3-201ENST00000263511 HCFC1P51610 2035 aa12.21□□□□□ -0.46
CROCCP3-201ENST00000263511 GAS8-AS1O95177 125 aa12.21□□□□□ -0.46
CROCCP3-201ENST00000263511 ZNF580Q9UK33 172 aa12.2□□□□□ -0.46
CROCCP3-201ENST00000263511 BRI3O95415 125 aa12.2□□□□□ -0.46
CROCCP3-201ENST00000263511 SMIM11BQ8TCY0 68 aa12.2□□□□□ -0.46
CROCCP3-201ENST00000263511 RETNQ9HD89 108 aa12.2□□□□□ -0.46
CROCCP3-201ENST00000263511 LRP4O75096 1905 aa12.19□□□□□ -0.46
CROCCP3-201ENST00000263511 LST1O00453 97 aa12.18□□□□□ -0.46
CROCCP3-201ENST00000263511 XGP55808 180 aa12.17□□□□□ -0.46
CROCCP3-201ENST00000263511 EGFEM1PQ0D2K5 195 aa12.17□□□□□ -0.46
CROCCP3-201ENST00000263511 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.17□□□□□ -0.46
CROCCP3-201ENST00000263511 IGIPA6NJ69 53 aa12.17□□□□□ -0.46
CROCCP3-201ENST00000263511 LINC00242Q5T6M2 205 aa12.17□□□□□ -0.46
CROCCP3-201ENST00000263511 HRCT1Q6UXD1 115 aa12.17□□□□□ -0.46
CROCCP3-201ENST00000263511 POM121L12Q8N7R1 296 aa12.17□□□□□ -0.46
CROCCP3-201ENST00000263511 IGLV9-49A0A0B4J1Y8 123 aa12.16□□□□□ -0.46
CROCCP3-201ENST00000263511 ZFYVE26Q68DK2 2539 aa12.15□□□□□ -0.46
CROCCP3-201ENST00000263511 FAM236DA0A1B0GTK5 79 aa12.15□□□□□ -0.46
CROCCP3-201ENST00000263511 FAM236CP0DP71 79 aa12.15□□□□□ -0.46
CROCCP3-201ENST00000263511 UNQ6190/PRO20217Q6UXQ8 127 aa12.15□□□□□ -0.46
CROCCP3-201ENST00000263511 CCDC179H3BU77 68 aa12.14□□□□□ -0.47
CROCCP3-201ENST00000263511 Q6ZTC4 211 aa12.14□□□□□ -0.47
CROCCP3-201ENST00000263511 WFDC13Q8IUB5 93 aa12.14□□□□□ -0.47
CROCCP3-201ENST00000263511 M0QXV9 152 aa12.13□□□□□ -0.47
CROCCP3-201ENST00000263511 ABCA12Q86UK0 2595 aa12.13□□□□□ -0.47
CROCCP3-201ENST00000263511 RPL28P46779 137 aaKnown RBP12.13□□□□□ -0.47
CROCCP3-201ENST00000263511 FHL2Q14192 279 aa12.12□□□□□ -0.47
CROCCP3-201ENST00000263511 IMUPQ9GZP8 106 aa12.12□□□□□ -0.47
CROCCP3-201ENST00000263511 SMIM1B2RUZ4 78 aa12.1□□□□□ -0.47
CROCCP3-201ENST00000263511 FAM19A3Q7Z5A8 133 aa12.1□□□□□ -0.47
CROCCP3-201ENST00000263511 K7ERS5 55 aa12.1□□□□□ -0.47
CROCCP3-201ENST00000263511 C10orf25Q5T742 122 aa12.09□□□□□ -0.47
CROCCP3-201ENST00000263511 URB1-AS1Q96HZ7 61 aa12.09□□□□□ -0.47
CROCCP3-201ENST00000263511 C6orf223Q8N319 242 aa12.09□□□□□ -0.47
CROCCP3-201ENST00000263511 IGLV4-60A0A075B6I1 120 aa12.08□□□□□ -0.48
CROCCP3-201ENST00000263511 COL5A1P20908 1838 aaPredicted RBP12.08□□□□□ -0.48
CROCCP3-201ENST00000263511 IGLV5-52A0A0A0MRZ9 124 aa12.07□□□□□ -0.48
CROCCP3-201ENST00000263511 CSDC2Q9Y534 153 aaKnown RBP12.07□□□□□ -0.48
CROCCP3-201ENST00000263511 TLN2Q9Y4G6 2542 aa12.07□□□□□ -0.48
CROCCP3-201ENST00000263511 USP9XQ93008 2570 aaPredicted RBP12.06□□□□□ -0.48
CROCCP3-201ENST00000263511 SERP2Q8N6R1 65 aa12.06□□□□□ -0.48
CROCCP3-201ENST00000263511 MPLKIPQ8TAP9 179 aa12.06□□□□□ -0.48
CROCCP3-201ENST00000263511 BEAN1Q3B7T3 259 aa12.06□□□□□ -0.48
CROCCP3-201ENST00000263511 C9orf116Q5BN46 136 aaPredicted RBP12.06□□□□□ -0.48
CROCCP3-201ENST00000263511 ATG2AQ2TAZ0 1938 aa12.06□□□□□ -0.48
CROCCP3-201ENST00000263511 COX8CQ7Z4L0 72 aa12.06□□□□□ -0.48
CROCCP3-201ENST00000263511 LINC00694P0DN24 101 aa12.05□□□□□ -0.48
CROCCP3-201ENST00000263511 TRBV10-3A0A0K0K1G6 114 aa12.05□□□□□ -0.48
CROCCP3-201ENST00000263511 REG3GQ6UW15 175 aa12.05□□□□□ -0.48
CROCCP3-201ENST00000263511 Q8N9L7 120 aa12.05□□□□□ -0.48
CROCCP3-201ENST00000263511 NTM-AS1Q6ZSK4 140 aa12.04□□□□□ -0.48
CROCCP3-201ENST00000263511 COX7CP15954 63 aa12.04□□□□□ -0.48
CROCCP3-201ENST00000263511 PRR15LQ9BU68 103 aa12.04□□□□□ -0.48
CROCCP3-201ENST00000263511 NDUFC2-KCTD14E9PQ53 114 aa12.04□□□□□ -0.48
CROCCP3-201ENST00000263511 NDUFC1O43677 76 aa12.04□□□□□ -0.48
CROCCP3-201ENST00000263511 SVIPQ8NHG7 77 aa12.04□□□□□ -0.48
CROCCP3-201ENST00000263511 SPTSSBQ8NFR3 76 aa12.04□□□□□ -0.48
CROCCP3-201ENST00000263511 COX6A2Q02221 97 aa12.03□□□□□ -0.48
CROCCP3-201ENST00000263511 Q6Q795 121 aa12.03□□□□□ -0.48
CROCCP3-201ENST00000263511 F8WDY8 70 aa12.03□□□□□ -0.48
CROCCP3-201ENST00000263511 FN1P02751 2386 aaKnown RBP12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms