RNA–Protein interactions for RNA: ENST00000635886.1

C11orf53-202, Transcript of chromosome 11 open reading frame 53, humanhuman

TSL 5

Gene C11orf53, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf53-202ENST00000635886 TMEM218A2RU14 115 aa8.72□□□□□ -1.01
C11orf53-202ENST00000635886 MRPL52Q86TS9 123 aaKnown RBP8.72□□□□□ -1.01
C11orf53-202ENST00000635886 CLRN3Q8NCR9 226 aa8.72□□□□□ -1.01
C11orf53-202ENST00000635886 CHCHD10Q8WYQ3 142 aaPredicted RBP8.72□□□□□ -1.01
C11orf53-202ENST00000635886 NPYP01303 97 aa8.71□□□□□ -1.02
C11orf53-202ENST00000635886 PPBPP02775 128 aa8.71□□□□□ -1.02
C11orf53-202ENST00000635886 RPL32P62910 135 aaKnown RBP8.71□□□□□ -1.02
C11orf53-202ENST00000635886 Q5VSD8 79 aa8.71□□□□□ -1.02
C11orf53-202ENST00000635886 DGAT2L7PQ6IED9 249 aa8.71□□□□□ -1.02
C11orf53-202ENST00000635886 CDC42SE2Q9NRR3 84 aa8.71□□□□□ -1.02
C11orf53-202ENST00000635886 hDV102S1A0JD36 115 aa8.7□□□□□ -1.02
C11orf53-202ENST00000635886 ORMDL3Q8N138 153 aa8.7□□□□□ -1.02
C11orf53-202ENST00000635886 ZNF664Q8N3J9 261 aa8.7□□□□□ -1.02
C11orf53-202ENST00000635886 SMIM2Q9BVW6 85 aa8.7□□□□□ -1.02
C11orf53-202ENST00000635886 LINC00959A0A1B0GUT2 108 aa8.69□□□□□ -1.02
C11orf53-202ENST00000635886 PHOX2AO14813 284 aa8.69□□□□□ -1.02
C11orf53-202ENST00000635886 TMEM136Q6ZRR5 245 aa8.69□□□□□ -1.02
C11orf53-202ENST00000635886 SCXQ7RTU7 201 aa8.69□□□□□ -1.02
C11orf53-202ENST00000635886 COMMD7Q86VX2 200 aa8.69□□□□□ -1.02
C11orf53-202ENST00000635886 C15orf56Q8N910 161 aa8.69□□□□□ -1.02
C11orf53-202ENST00000635886 C9orf163Q8N9P6 203 aa8.69□□□□□ -1.02
C11orf53-202ENST00000635886 UBE2D4Q9Y2X8 147 aa8.69□□□□□ -1.02
C11orf53-202ENST00000635886 XCL1P47992 114 aa8.68□□□□□ -1.02
C11orf53-202ENST00000635886 FOXI1Q12951 378 aa8.68□□□□□ -1.02
C11orf53-202ENST00000635886 PRELID3AQ96N28 172 aa8.68□□□□□ -1.02
C11orf53-202ENST00000635886 CSDC2Q9Y534 153 aaKnown RBP8.68□□□□□ -1.02
C11orf53-202ENST00000635886 TCAPO15273 167 aa8.67□□□□□ -1.02
C11orf53-202ENST00000635886 CCL25O15444 150 aa8.67□□□□□ -1.02
C11orf53-202ENST00000635886 SLPIP03973 132 aa8.67□□□□□ -1.02
C11orf53-202ENST00000635886 CNBPP62633 177 aaKnown RBP8.67□□□□□ -1.02
C11orf53-202ENST00000635886 SMAGPQ0VAQ4 97 aa8.67□□□□□ -1.02
C11orf53-202ENST00000635886 CFAP161Q6P656 301 aa8.67□□□□□ -1.02
C11orf53-202ENST00000635886 CHAC1Q9BUX1 264 aa8.67□□□□□ -1.02
C11orf53-202ENST00000635886 SEC11CQ9BY50 192 aa8.67□□□□□ -1.02
C11orf53-202ENST00000635886 AP5S1Q9NUS5 200 aa8.67□□□□□ -1.02
C11orf53-202ENST00000635886 FAM229AH3BQW9 127 aa8.66□□□□□ -1.02
C11orf53-202ENST00000635886 RPL39P62891 51 aaKnown RBP8.66□□□□□ -1.02
C11orf53-202ENST00000635886 SS18Q15532 418 aa8.66□□□□□ -1.02
C11orf53-202ENST00000635886 HIGD2BQ4VC39 106 aa8.66□□□□□ -1.02
C11orf53-202ENST00000635886 RNASE13Q5GAN3 156 aaKnown RBP8.66□□□□□ -1.02
C11orf53-202ENST00000635886 Q6ZUT4 128 aa8.66□□□□□ -1.02
C11orf53-202ENST00000635886 TMEM18Q96B42 140 aa8.66□□□□□ -1.02
C11orf53-202ENST00000635886 IMMP2LQ96T52 175 aa8.66□□□□□ -1.02
C11orf53-202ENST00000635886 TIMM21Q9BVV7 248 aa8.66□□□□□ -1.02
C11orf53-202ENST00000635886 CTDSP1Q9GZU7 261 aa8.66□□□□□ -1.02
C11orf53-202ENST00000635886 CIRBP-AS1Q8TBR5 109 aa8.65□□□□□ -1.02
C11orf53-202ENST00000635886 GVQW2A0A096LPI5 108 aaPredicted RBP8.64□□□□□ -1.03
C11orf53-202ENST00000635886 CD164L2Q6UWJ8 174 aa8.64□□□□□ -1.03
C11orf53-202ENST00000635886 SDIM1Q6ZPB5 146 aa8.64□□□□□ -1.03
C11orf53-202ENST00000635886 LINC00528Q8N1L1 170 aa8.64□□□□□ -1.03
C11orf53-202ENST00000635886 LAMTOR2Q9Y2Q5 125 aa8.64□□□□□ -1.03
C11orf53-202ENST00000635886 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.63□□□□□ -1.03
C11orf53-202ENST00000635886 LOC389332A0A1B0GUA5 103 aa8.63□□□□□ -1.03
C11orf53-202ENST00000635886 PRSS47A8MTI9 375 aa8.63□□□□□ -1.03
C11orf53-202ENST00000635886 INAFM2P0DMQ5 153 aa8.63□□□□□ -1.03
C11orf53-202ENST00000635886 RAB5AP20339 215 aa8.63□□□□□ -1.03
C11orf53-202ENST00000635886 FAM104AQ969W3 186 aa8.63□□□□□ -1.03
C11orf53-202ENST00000635886 MAP1LC3AQ9H492 121 aa8.63□□□□□ -1.03
C11orf53-202ENST00000635886 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.63□□□□□ -1.03
C11orf53-202ENST00000635886 VPS13BQ7Z7G8 4022 aa8.62□□□□□ -1.03
C11orf53-202ENST00000635886 IGHV3-64A0A075B6Q5 118 aa8.62□□□□□ -1.03
C11orf53-202ENST00000635886 TRAV13-1A0A0B4J241 112 aa8.62□□□□□ -1.03
C11orf53-202ENST00000635886 IGHV1-58A0A0C4DH39 117 aa8.62□□□□□ -1.03
C11orf53-202ENST00000635886 C1orf196B1AJZ1 125 aa8.62□□□□□ -1.03
C11orf53-202ENST00000635886 PANO1I0J062 215 aa8.62□□□□□ -1.03
C11orf53-202ENST00000635886 C10orf91Q5T1B1 145 aa8.62□□□□□ -1.03
C11orf53-202ENST00000635886 OPRPNQ99935 248 aaPredicted RBP8.62□□□□□ -1.03
C11orf53-202ENST00000635886 SPANXA1Q9NS26 97 aa8.62□□□□□ -1.03
C11orf53-202ENST00000635886 TRAV9-1A0A075B6T8 112 aa8.61□□□□□ -1.03
C11orf53-202ENST00000635886 CARHSP1Q9Y2V2 147 aaKnown RBP8.61□□□□□ -1.03
C11orf53-202ENST00000635886 MRPS36P82909 103 aaKnown RBP8.6□□□□□ -1.03
C11orf53-202ENST00000635886 Q8N8P6 123 aa8.6□□□□□ -1.03
C11orf53-202ENST00000635886 LINC00526Q96FQ7 95 aa8.6□□□□□ -1.03
C11orf53-202ENST00000635886 COX7A2LO14548 114 aa8.59□□□□□ -1.03
C11orf53-202ENST00000635886 CHTF8P0CG12 524 aa8.59□□□□□ -1.03
C11orf53-202ENST00000635886 S100PP25815 95 aa8.59□□□□□ -1.03
C11orf53-202ENST00000635886 KIAA1644Q3SXP7 199 aa8.59□□□□□ -1.03
C11orf53-202ENST00000635886 PLA2G1BP04054 148 aaKnown RBP8.58□□□□□ -1.04
C11orf53-202ENST00000635886 MALP21145 153 aa8.58□□□□□ -1.04
C11orf53-202ENST00000635886 IFI27P40305 119 aaPredicted RBP8.58□□□□□ -1.04
C11orf53-202ENST00000635886 COX6A2Q02221 97 aa8.58□□□□□ -1.04
C11orf53-202ENST00000635886 CIRBPQ14011 172 aaKnown RBP8.58□□□□□ -1.04
C11orf53-202ENST00000635886 RHEBQ15382 184 aa8.58□□□□□ -1.04
C11orf53-202ENST00000635886 C5orf38Q86SI9 138 aa8.58□□□□□ -1.04
C11orf53-202ENST00000635886 RPS10P5Q9NQ39 176 aa8.58□□□□□ -1.04
C11orf53-202ENST00000635886 IFITM10A6NMD0 228 aa8.57□□□□□ -1.04
C11orf53-202ENST00000635886 ZNF561-AS1K7EIQ3 104 aa8.57□□□□□ -1.04
C11orf53-202ENST00000635886 PYGO1Q9Y3Y4 419 aa8.57□□□□□ -1.04
C11orf53-202ENST00000635886 SRRM2Q9UQ35 2752 aaKnown RBP8.56□□□□□ -1.04
C11orf53-202ENST00000635886 IGLV4-3A0A075B6K6 122 aa8.56□□□□□ -1.04
C11orf53-202ENST00000635886 ORMDL2Q53FV1 153 aa8.56□□□□□ -1.04
C11orf53-202ENST00000635886 C2orf66Q6UXQ4 117 aa8.56□□□□□ -1.04
C11orf53-202ENST00000635886 PRSS3P2Q8NHM4 247 aa8.56□□□□□ -1.04
C11orf53-202ENST00000635886 SPACA4Q8TDM5 124 aa8.56□□□□□ -1.04
C11orf53-202ENST00000635886 GNB1LQ9BYB4 327 aa8.56□□□□□ -1.04
C11orf53-202ENST00000635886 NXT2Q9NPJ8 142 aaKnown RBP8.56□□□□□ -1.04
C11orf53-202ENST00000635886 CYSLTR1Q9Y271 337 aa8.56□□□□□ -1.04
C11orf53-202ENST00000635886 K7EMI3 77 aa8.55□□□□□ -1.04
C11orf53-202ENST00000635886 KRTAP10-4P60372 401 aaPredicted RBP8.55□□□□□ -1.04
C11orf53-202ENST00000635886 SYCNQ0VAF6 134 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms