RNA–Protein interactions for RNA: ENST00000634712.2

LINC00339-207, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 1,388 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-207ENST00000634712 CFAP161Q6P656 301 aa10.23□□□□□ -0.77
LINC00339-207ENST00000634712 CHCHD10Q8WYQ3 142 aaPredicted RBP10.23□□□□□ -0.77
LINC00339-207ENST00000634712 TMEM18Q96B42 140 aa10.23□□□□□ -0.77
LINC00339-207ENST00000634712 AP5S1Q9NUS5 200 aa10.23□□□□□ -0.77
LINC00339-207ENST00000634712 PCLOQ9Y6V0 5065 aa10.22□□□□□ -0.77
LINC00339-207ENST00000634712 TMEM218A2RU14 115 aa10.22□□□□□ -0.77
LINC00339-207ENST00000634712 FAM229AH3BQW9 127 aa10.22□□□□□ -0.77
LINC00339-207ENST00000634712 TMEM136Q6ZRR5 245 aa10.22□□□□□ -0.77
LINC00339-207ENST00000634712 MRPL52Q86TS9 123 aaKnown RBP10.22□□□□□ -0.77
LINC00339-207ENST00000634712 PHOX2AO14813 284 aa10.21□□□□□ -0.78
LINC00339-207ENST00000634712 RPL32P62910 135 aaKnown RBP10.21□□□□□ -0.78
LINC00339-207ENST00000634712 SS18Q15532 418 aa10.21□□□□□ -0.78
LINC00339-207ENST00000634712 ORMDL3Q8N138 153 aa10.21□□□□□ -0.78
LINC00339-207ENST00000634712 ZNF664Q8N3J9 261 aa10.21□□□□□ -0.78
LINC00339-207ENST00000634712 CDC42SE2Q9NRR3 84 aa10.21□□□□□ -0.78
LINC00339-207ENST00000634712 NPYP01303 97 aa10.2□□□□□ -0.78
LINC00339-207ENST00000634712 Q5VSD8 79 aa10.2□□□□□ -0.78
LINC00339-207ENST00000634712 Q6ZSA8 131 aa10.2□□□□□ -0.78
LINC00339-207ENST00000634712 LINC00959A0A1B0GUT2 108 aa10.19□□□□□ -0.78
LINC00339-207ENST00000634712 XCL1P47992 114 aa10.19□□□□□ -0.78
LINC00339-207ENST00000634712 COMMD7Q86VX2 200 aa10.19□□□□□ -0.78
LINC00339-207ENST00000634712 PRELID3AQ96N28 172 aa10.19□□□□□ -0.78
LINC00339-207ENST00000634712 SMIM2Q9BVW6 85 aa10.19□□□□□ -0.78
LINC00339-207ENST00000634712 DNAH8Q96JB1 4490 aa10.19□□□□□ -0.78
LINC00339-207ENST00000634712 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.18□□□□□ -0.78
LINC00339-207ENST00000634712 C9orf163Q8N9P6 203 aa10.18□□□□□ -0.78
LINC00339-207ENST00000634712 IMMP2LQ96T52 175 aa10.18□□□□□ -0.78
LINC00339-207ENST00000634712 SEC11CQ9BY50 192 aa10.18□□□□□ -0.78
LINC00339-207ENST00000634712 CTDSP1Q9GZU7 261 aa10.18□□□□□ -0.78
LINC00339-207ENST00000634712 CSDC2Q9Y534 153 aaKnown RBP10.18□□□□□ -0.78
LINC00339-207ENST00000634712 ABCA13Q86UQ4 5058 aa10.18□□□□□ -0.78
LINC00339-207ENST00000634712 CCL25O15444 150 aa10.17□□□□□ -0.78
LINC00339-207ENST00000634712 ADCYAP1P18509 176 aa10.17□□□□□ -0.78
LINC00339-207ENST00000634712 RAB5AP20339 215 aa10.17□□□□□ -0.78
LINC00339-207ENST00000634712 UBE2D4Q9Y2X8 147 aa10.17□□□□□ -0.78
LINC00339-207ENST00000634712 CNBPP62633 177 aaKnown RBP10.16□□□□□ -0.78
LINC00339-207ENST00000634712 CHAC1Q9BUX1 264 aa10.16□□□□□ -0.78
LINC00339-207ENST00000634712 FOXI1Q12951 378 aa10.15□□□□□ -0.78
LINC00339-207ENST00000634712 LCE2DQ5TA82 110 aaPredicted RBP10.15□□□□□ -0.78
LINC00339-207ENST00000634712 SCXQ7RTU7 201 aa10.15□□□□□ -0.78
LINC00339-207ENST00000634712 TIMM21Q9BVV7 248 aa10.15□□□□□ -0.78
LINC00339-207ENST00000634712 LAMTOR2Q9Y2Q5 125 aa10.15□□□□□ -0.78
LINC00339-207ENST00000634712 FAT1Q14517 4588 aa10.15□□□□□ -0.79
LINC00339-207ENST00000634712 LOC389332A0A1B0GUA5 103 aa10.14□□□□□ -0.79
LINC00339-207ENST00000634712 C1orf196B1AJZ1 125 aa10.14□□□□□ -0.79
LINC00339-207ENST00000634712 S100PP25815 95 aa10.14□□□□□ -0.79
LINC00339-207ENST00000634712 HIGD2BQ4VC39 106 aa10.14□□□□□ -0.79
LINC00339-207ENST00000634712 C15orf56Q8N910 161 aa10.14□□□□□ -0.79
LINC00339-207ENST00000634712 MAP1LC3AQ9H492 121 aa10.14□□□□□ -0.79
LINC00339-207ENST00000634712 IGHV3-64A0A075B6Q5 118 aa10.14□□□□□ -0.79
LINC00339-207ENST00000634712 TRAV13-1A0A0B4J241 112 aa10.14□□□□□ -0.79
LINC00339-207ENST00000634712 INAFM2P0DMQ5 153 aa10.14□□□□□ -0.79
LINC00339-207ENST00000634712 RPL39P62891 51 aaKnown RBP10.14□□□□□ -0.79
LINC00339-207ENST00000634712 RNASE13Q5GAN3 156 aaKnown RBP10.14□□□□□ -0.79
LINC00339-207ENST00000634712 CD164L2Q6UWJ8 174 aa10.14□□□□□ -0.79
LINC00339-207ENST00000634712 CIRBP-AS1Q8TBR5 109 aa10.13□□□□□ -0.79
LINC00339-207ENST00000634712 DPH3Q96FX2 82 aa10.13□□□□□ -0.79
LINC00339-207ENST00000634712 SPANXA1Q9NS26 97 aa10.13□□□□□ -0.79
LINC00339-207ENST00000634712 TRAV9-1A0A075B6T8 112 aa10.12□□□□□ -0.79
LINC00339-207ENST00000634712 IGHV1-58A0A0C4DH39 117 aa10.12□□□□□ -0.79
LINC00339-207ENST00000634712 PLA2G1BP04054 148 aaKnown RBP10.12□□□□□ -0.79
LINC00339-207ENST00000634712 MALP21145 153 aa10.12□□□□□ -0.79
LINC00339-207ENST00000634712 SDIM1Q6ZPB5 146 aa10.12□□□□□ -0.79
LINC00339-207ENST00000634712 Q6ZUT4 128 aa10.12□□□□□ -0.79
LINC00339-207ENST00000634712 LINC00528Q8N1L1 170 aa10.12□□□□□ -0.79
LINC00339-207ENST00000634712 GVQW2A0A096LPI5 108 aaPredicted RBP10.11□□□□□ -0.79
LINC00339-207ENST00000634712 PRSS47A8MTI9 375 aa10.11□□□□□ -0.79
LINC00339-207ENST00000634712 SLPIP03973 132 aa10.11□□□□□ -0.79
LINC00339-207ENST00000634712 COX7A2LO14548 114 aa10.1□□□□□ -0.79
LINC00339-207ENST00000634712 IFI27P40305 119 aaPredicted RBP10.1□□□□□ -0.79
LINC00339-207ENST00000634712 Q8N8P6 123 aa10.1□□□□□ -0.79
LINC00339-207ENST00000634712 ZNF561-AS1K7EIQ3 104 aa10.09□□□□□ -0.79
LINC00339-207ENST00000634712 RPS10P5Q9NQ39 176 aa10.09□□□□□ -0.79
LINC00339-207ENST00000634712 MRPS36P82909 103 aaKnown RBP10.08□□□□□ -0.8
LINC00339-207ENST00000634712 C10orf91Q5T1B1 145 aa10.08□□□□□ -0.8
LINC00339-207ENST00000634712 OPRPNQ99935 248 aaPredicted RBP10.08□□□□□ -0.8
LINC00339-207ENST00000634712 IFITM10A6NMD0 228 aa10.07□□□□□ -0.8
LINC00339-207ENST00000634712 RHEBQ15382 184 aa10.07□□□□□ -0.8
LINC00339-207ENST00000634712 KIAA1644Q3SXP7 199 aa10.07□□□□□ -0.8
LINC00339-207ENST00000634712 ORMDL2Q53FV1 153 aa10.07□□□□□ -0.8
LINC00339-207ENST00000634712 NXT2Q9NPJ8 142 aaKnown RBP10.07□□□□□ -0.8
LINC00339-207ENST00000634712 CARHSP1Q9Y2V2 147 aaKnown RBP10.07□□□□□ -0.8
LINC00339-207ENST00000634712 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.07□□□□□ -0.8
LINC00339-207ENST00000634712 K7EMI3 77 aa10.06□□□□□ -0.8
LINC00339-207ENST00000634712 APOMO95445 188 aa10.06□□□□□ -0.8
LINC00339-207ENST00000634712 COX19Q49B96 90 aa10.06□□□□□ -0.8
LINC00339-207ENST00000634712 C5orf38Q86SI9 138 aa10.06□□□□□ -0.8
LINC00339-207ENST00000634712 LINC00526Q96FQ7 95 aa10.06□□□□□ -0.8
LINC00339-207ENST00000634712 CYSLTR1Q9Y271 337 aa10.06□□□□□ -0.8
LINC00339-207ENST00000634712 PYGO1Q9Y3Y4 419 aa10.06□□□□□ -0.8
LINC00339-207ENST00000634712 VPS13BQ7Z7G8 4022 aa10.06□□□□□ -0.8
LINC00339-207ENST00000634712 COX6A2Q02221 97 aa10.05□□□□□ -0.8
LINC00339-207ENST00000634712 GNB1LQ9BYB4 327 aa10.05□□□□□ -0.8
LINC00339-207ENST00000634712 PKIGQ9Y2B9 76 aa10.05□□□□□ -0.8
LINC00339-207ENST00000634712 SRRM2Q9UQ35 2752 aaKnown RBP10.05□□□□□ -0.8
LINC00339-207ENST00000634712 G0S2P27469 103 aa10.04□□□□□ -0.8
LINC00339-207ENST00000634712 NDUFA5Q16718 116 aa10.04□□□□□ -0.8
LINC00339-207ENST00000634712 C2orf66Q6UXQ4 117 aa10.04□□□□□ -0.8
LINC00339-207ENST00000634712 TMEM141Q96I45 108 aa10.04□□□□□ -0.8
LINC00339-207ENST00000634712 CARD19Q96LW7 228 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms