RNA–Protein interactions for RNA: ENST00000631247.1

UBE3A-223, Transcript of ubiquitin protein ligase E3A, human

TSL 5

Gene UBE3A, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE3A-223	ENST00000631247	CNFN	Q9BYD5	112 aa		6.6	□□□□□ -1.35
UBE3A-223	ENST00000631247	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	6.59	□□□□□ -1.35
UBE3A-223	ENST00000631247	IGKV2-24	A0A0C4DH68	120 aa		6.59	□□□□□ -1.35
UBE3A-223	ENST00000631247	IGKV2-29	A2NJV5	120 aa	Predicted RBP	6.59	□□□□□ -1.35
UBE3A-223	ENST00000631247	RPS10	P46783	165 aa	Known RBP	6.59	□□□□□ -1.35
UBE3A-223	ENST00000631247		Q6ZNX1	250 aa		6.59	□□□□□ -1.35
UBE3A-223	ENST00000631247		Q6ZRU5	148 aa		6.59	□□□□□ -1.35
UBE3A-223	ENST00000631247	RPL39L	Q96EH5	51 aa	Known RBP	6.59	□□□□□ -1.35
UBE3A-223	ENST00000631247	TMEM101	Q96IK0	257 aa		6.59	□□□□□ -1.35
UBE3A-223	ENST00000631247		H7C423	109 aa		6.58	□□□□□ -1.36
UBE3A-223	ENST00000631247		K7EN84	100 aa		6.58	□□□□□ -1.36
UBE3A-223	ENST00000631247	GATC	O43716	136 aa	Known RBP	6.58	□□□□□ -1.36
UBE3A-223	ENST00000631247	NDUFS6	O75380	124 aa	Known RBP	6.58	□□□□□ -1.36
UBE3A-223	ENST00000631247	SLPI	P03973	132 aa		6.58	□□□□□ -1.36
UBE3A-223	ENST00000631247	FGF6	P10767	208 aa		6.58	□□□□□ -1.36
UBE3A-223	ENST00000631247	PMCH	P20382	165 aa		6.58	□□□□□ -1.36
UBE3A-223	ENST00000631247	CEBPG	P53567	150 aa		6.58	□□□□□ -1.36
UBE3A-223	ENST00000631247	COX6A2	Q02221	97 aa		6.58	□□□□□ -1.36
UBE3A-223	ENST00000631247	MAJIN	Q3KP22	176 aa		6.58	□□□□□ -1.36
UBE3A-223	ENST00000631247	TCTE3	Q8IZS6	198 aa		6.58	□□□□□ -1.36
UBE3A-223	ENST00000631247	OCC1	Q8TAD7	63 aa		6.58	□□□□□ -1.36
UBE3A-223	ENST00000631247	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	6.58	□□□□□ -1.36
UBE3A-223	ENST00000631247	PLAC8	Q9NZF1	115 aa		6.58	□□□□□ -1.36
UBE3A-223	ENST00000631247	SDHAF1	A6NFY7	115 aa		6.57	□□□□□ -1.36
UBE3A-223	ENST00000631247		A8MWL6	223 aa		6.57	□□□□□ -1.36
UBE3A-223	ENST00000631247	PHOX2A	O14813	284 aa		6.57	□□□□□ -1.36
UBE3A-223	ENST00000631247	ZNF25	P17030	456 aa	Predicted RBP	6.57	□□□□□ -1.36
UBE3A-223	ENST00000631247	XCL1	P47992	114 aa		6.57	□□□□□ -1.36
UBE3A-223	ENST00000631247	GTSF1	Q8WW33	167 aa		6.57	□□□□□ -1.36
UBE3A-223	ENST00000631247	PKIG	Q9Y2B9	76 aa		6.57	□□□□□ -1.36
UBE3A-223	ENST00000631247	TNXB	P22105	4242 aa		6.56	□□□□□ -1.36
UBE3A-223	ENST00000631247	GVQW2	A0A096LPI5	108 aa	Predicted RBP	6.56	□□□□□ -1.36
UBE3A-223	ENST00000631247		I3L3M4	83 aa		6.56	□□□□□ -1.36
UBE3A-223	ENST00000631247	STPG4	Q8N801	248 aa		6.56	□□□□□ -1.36
UBE3A-223	ENST00000631247	OR5A1	Q8NGJ0	315 aa		6.56	□□□□□ -1.36
UBE3A-223	ENST00000631247	MRAP2	Q96G30	205 aa		6.56	□□□□□ -1.36
UBE3A-223	ENST00000631247	TMEM250	H0YL14	139 aa		6.55	□□□□□ -1.36
UBE3A-223	ENST00000631247	FOXA3	P55318	350 aa	Predicted RBP	6.55	□□□□□ -1.36
UBE3A-223	ENST00000631247	PRSS3P2	Q8NHM4	247 aa		6.55	□□□□□ -1.36
UBE3A-223	ENST00000631247	ST20	Q9HBF5	79 aa		6.55	□□□□□ -1.36
UBE3A-223	ENST00000631247	LINC00474	Q9P2X8	69 aa		6.55	□□□□□ -1.36
UBE3A-223	ENST00000631247	LRP2	P98164	4655 aa		6.55	□□□□□ -1.36
UBE3A-223	ENST00000631247	IGHV1-58	A0A0C4DH39	117 aa		6.54	□□□□□ -1.36
UBE3A-223	ENST00000631247	CCL25	O15444	150 aa		6.54	□□□□□ -1.36
UBE3A-223	ENST00000631247	MT1HL1	P0DM35	61 aa		6.54	□□□□□ -1.36
UBE3A-223	ENST00000631247	BLOC1S1	P78537	153 aa		6.54	□□□□□ -1.36
UBE3A-223	ENST00000631247	FOXI1	Q12951	378 aa		6.54	□□□□□ -1.36
UBE3A-223	ENST00000631247	SS18	Q15532	418 aa		6.54	□□□□□ -1.36
UBE3A-223	ENST00000631247	FAM231D	Q6ZW35	169 aa		6.54	□□□□□ -1.36
UBE3A-223	ENST00000631247	LYPD6B	Q8NI32	183 aa		6.54	□□□□□ -1.36
UBE3A-223	ENST00000631247	CARD19	Q96LW7	228 aa		6.54	□□□□□ -1.36
UBE3A-223	ENST00000631247	TMEM242	Q9NWH2	141 aa		6.54	□□□□□ -1.36
UBE3A-223	ENST00000631247		A0A096LNI7	61 aa		6.53	□□□□□ -1.36
UBE3A-223	ENST00000631247	TRBV6-5	A0A0K0K1A5	114 aa		6.53	□□□□□ -1.36
UBE3A-223	ENST00000631247	LINC00959	A0A1B0GUT2	108 aa		6.53	□□□□□ -1.36
UBE3A-223	ENST00000631247	PRR3	P79522	188 aa	Known RBP	6.53	□□□□□ -1.36
UBE3A-223	ENST00000631247	ALKAL2	Q6UX46	152 aa		6.53	□□□□□ -1.36
UBE3A-223	ENST00000631247	AKAP14	Q86UN6	197 aa		6.53	□□□□□ -1.36
UBE3A-223	ENST00000631247	FAM210A	Q96ND0	272 aa		6.53	□□□□□ -1.36
UBE3A-223	ENST00000631247	SMIM7	Q9BQ49	75 aa		6.53	□□□□□ -1.36
UBE3A-223	ENST00000631247	EIF5A2	Q9GZV4	153 aa	Known RBP	6.53	□□□□□ -1.36
UBE3A-223	ENST00000631247		A0A1B0GUT8	65 aa		6.52	□□□□□ -1.37
UBE3A-223	ENST00000631247	HIGD1C	A8MV81	97 aa		6.52	□□□□□ -1.37
UBE3A-223	ENST00000631247	TSHB	P01222	138 aa		6.52	□□□□□ -1.37
UBE3A-223	ENST00000631247	FCER1G	P30273	86 aa		6.52	□□□□□ -1.37
UBE3A-223	ENST00000631247	C7orf77	A4D0Y5	90 aa		6.51	□□□□□ -1.37
UBE3A-223	ENST00000631247	ESD	P10768	282 aa		6.51	□□□□□ -1.37
UBE3A-223	ENST00000631247	SMAGP	Q0VAQ4	97 aa		6.51	□□□□□ -1.37
UBE3A-223	ENST00000631247	TSKU	Q8WUA8	353 aa		6.51	□□□□□ -1.37
UBE3A-223	ENST00000631247	LINC00526	Q96FQ7	95 aa		6.51	□□□□□ -1.37
UBE3A-223	ENST00000631247	TMEM191A	Q9H0A3	160 aa		6.51	□□□□□ -1.37
UBE3A-223	ENST00000631247	FAM231B	A6NCW3	169 aa		6.5	□□□□□ -1.37
UBE3A-223	ENST00000631247	ZNF727	A8MUV8	499 aa		6.5	□□□□□ -1.37
UBE3A-223	ENST00000631247	CAMP	P49913	170 aa		6.5	□□□□□ -1.37
UBE3A-223	ENST00000631247	SYCN	Q0VAF6	134 aa		6.5	□□□□□ -1.37
UBE3A-223	ENST00000631247	CD164L2	Q6UWJ8	174 aa		6.5	□□□□□ -1.37
UBE3A-223	ENST00000631247	MRPL52	Q86TS9	123 aa	Known RBP	6.5	□□□□□ -1.37
UBE3A-223	ENST00000631247	AMN1	Q8IY45	258 aa		6.5	□□□□□ -1.37
UBE3A-223	ENST00000631247	ZNF664	Q8N3J9	261 aa		6.5	□□□□□ -1.37
UBE3A-223	ENST00000631247	ISOC2	Q96AB3	205 aa		6.5	□□□□□ -1.37
UBE3A-223	ENST00000631247	CDC42SE2	Q9NRR3	84 aa		6.5	□□□□□ -1.37
UBE3A-223	ENST00000631247	RNF213	Q63HN8	5207 aa		6.5	□□□□□ -1.37
UBE3A-223	ENST00000631247	TRBV27	A0A0K0K1C4	114 aa		6.49	□□□□□ -1.37
UBE3A-223	ENST00000631247	COX7A2L	O14548	114 aa		6.49	□□□□□ -1.37
UBE3A-223	ENST00000631247	GAS8-AS1	O95177	125 aa		6.49	□□□□□ -1.37
UBE3A-223	ENST00000631247	PPP1R17	O96001	155 aa		6.49	□□□□□ -1.37
UBE3A-223	ENST00000631247	RIG	Q13278	110 aa		6.49	□□□□□ -1.37
UBE3A-223	ENST00000631247	REG3G	Q6UW15	175 aa		6.49	□□□□□ -1.37
UBE3A-223	ENST00000631247	LINC01551	Q86U37	167 aa		6.49	□□□□□ -1.37
UBE3A-223	ENST00000631247	C1orf196	B1AJZ1	125 aa		6.48	□□□□□ -1.37
UBE3A-223	ENST00000631247	SMKR1	H3BMG3	65 aa		6.48	□□□□□ -1.37
UBE3A-223	ENST00000631247	VCY	O14598	125 aa		6.48	□□□□□ -1.37
UBE3A-223	ENST00000631247	TRIAP1	O43715	76 aa		6.48	□□□□□ -1.37
UBE3A-223	ENST00000631247	RAB4A	P20338	218 aa		6.48	□□□□□ -1.37
UBE3A-223	ENST00000631247	KIR2DL4	Q99706	377 aa		6.48	□□□□□ -1.37
UBE3A-223	ENST00000631247	OSTC	Q9NRP0	149 aa		6.48	□□□□□ -1.37
UBE3A-223	ENST00000631247	LOC107984640	A0A0U1RRK4	108 aa		6.47	□□□□□ -1.37
UBE3A-223	ENST00000631247	PPP1R2P9	O14990	202 aa		6.47	□□□□□ -1.37
UBE3A-223	ENST00000631247	POLR2K	P53803	58 aa	Known RBP	6.47	□□□□□ -1.37
UBE3A-223	ENST00000631247	SUMO2	P61956	95 aa	Known RBP	6.47	□□□□□ -1.37

Retrieved 100 of 20,778 RNA–protein pairs in 98.8 ms