RNA–Protein interactions for RNA: ENST00000625810.2

ATG4B-226, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4 BASIC

Gene ATG4B, Length 370 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-226ENST00000625810 IGKV2-24A0A0C4DH68 120 aa12.15□□□□□ -0.46
ATG4B-226ENST00000625810 LINC00959A0A1B0GUT2 108 aa12.15□□□□□ -0.46
ATG4B-226ENST00000625810 CCL25O15444 150 aa12.15□□□□□ -0.46
ATG4B-226ENST00000625810 RAB4AP20338 218 aa12.15□□□□□ -0.46
ATG4B-226ENST00000625810 Q6ZRU5 148 aa12.15□□□□□ -0.46
ATG4B-226ENST00000625810 SRP19P09132 144 aaKnown RBP12.14□□□□□ -0.47
ATG4B-226ENST00000625810 POLR2KP53803 58 aaKnown RBP12.14□□□□□ -0.47
ATG4B-226ENST00000625810 RIGQ13278 110 aa12.14□□□□□ -0.47
ATG4B-226ENST00000625810 SS18Q15532 418 aa12.14□□□□□ -0.47
ATG4B-226ENST00000625810 AMN1Q8IY45 258 aa12.14□□□□□ -0.47
ATG4B-226ENST00000625810 PHOX2AO14813 284 aa12.13□□□□□ -0.47
ATG4B-226ENST00000625810 IGHV1-58A0A0C4DH39 117 aa12.12□□□□□ -0.47
ATG4B-226ENST00000625810 TRBV27A0A0K0K1C4 114 aa12.12□□□□□ -0.47
ATG4B-226ENST00000625810 C7orf77A4D0Y5 90 aa12.12□□□□□ -0.47
ATG4B-226ENST00000625810 MT1HL1P0DM35 61 aa12.12□□□□□ -0.47
ATG4B-226ENST00000625810 STPG4Q8N801 248 aa12.12□□□□□ -0.47
ATG4B-226ENST00000625810 CDC42SE2Q9NRR3 84 aa12.12□□□□□ -0.47
ATG4B-226ENST00000625810 UBR4Q5T4S7 5183 aa12.11□□□□□ -0.47
ATG4B-226ENST00000625810 VCYO14598 125 aa12.11□□□□□ -0.47
ATG4B-226ENST00000625810 FCER1GP30273 86 aa12.11□□□□□ -0.47
ATG4B-226ENST00000625810 MRPL52Q86TS9 123 aaKnown RBP12.11□□□□□ -0.47
ATG4B-226ENST00000625810 ZNF664Q8N3J9 261 aa12.11□□□□□ -0.47
ATG4B-226ENST00000625810 V9GYV3 84 aa12.11□□□□□ -0.47
ATG4B-226ENST00000625810 SMKR1H3BMG3 65 aa12.1□□□□□ -0.47
ATG4B-226ENST00000625810 PPP1R17O96001 155 aa12.1□□□□□ -0.47
ATG4B-226ENST00000625810 TMEM241Q24JQ0 296 aa12.1□□□□□ -0.47
ATG4B-226ENST00000625810 NUP35Q8NFH5 326 aa12.1□□□□□ -0.47
ATG4B-226ENST00000625810 LINC00526Q96FQ7 95 aa12.1□□□□□ -0.47
ATG4B-226ENST00000625810 PKIGQ9Y2B9 76 aa12.1□□□□□ -0.47
ATG4B-226ENST00000625810 ZNF561-AS1K7EIQ3 104 aa12.09□□□□□ -0.47
ATG4B-226ENST00000625810 CD164L2Q6UWJ8 174 aa12.09□□□□□ -0.47
ATG4B-226ENST00000625810 ISOC2Q96AB3 205 aa12.09□□□□□ -0.47
ATG4B-226ENST00000625810 A0A096LNI7 61 aa12.08□□□□□ -0.48
ATG4B-226ENST00000625810 SMAGPQ0VAQ4 97 aa12.08□□□□□ -0.48
ATG4B-226ENST00000625810 FAM74A3Q4VXF1 159 aa12.08□□□□□ -0.48
ATG4B-226ENST00000625810 CARD19Q96LW7 228 aa12.08□□□□□ -0.48
ATG4B-226ENST00000625810 LINC00474Q9P2X8 69 aa12.08□□□□□ -0.48
ATG4B-226ENST00000625810 NAT8BQ9UHF3 227 aa12.08□□□□□ -0.48
ATG4B-226ENST00000625810 SUMO2P61956 95 aaKnown RBP12.07□□□□□ -0.48
ATG4B-226ENST00000625810 KIR2DL4Q99706 377 aa12.07□□□□□ -0.48
ATG4B-226ENST00000625810 MALP21145 153 aa12.06□□□□□ -0.48
ATG4B-226ENST00000625810 RPL23P62829 140 aaKnown RBP12.06□□□□□ -0.48
ATG4B-226ENST00000625810 ADIRFQ15847 76 aa12.06□□□□□ -0.48
ATG4B-226ENST00000625810 C1orf196B1AJZ1 125 aa12.05□□□□□ -0.48
ATG4B-226ENST00000625810 PPP1R2P9O14990 202 aa12.05□□□□□ -0.48
ATG4B-226ENST00000625810 SYCNQ0VAF6 134 aa12.05□□□□□ -0.48
ATG4B-226ENST00000625810 NRACQ8N912 160 aa12.05□□□□□ -0.48
ATG4B-226ENST00000625810 CAMPP49913 170 aa12.04□□□□□ -0.48
ATG4B-226ENST00000625810 NAT8Q9UHE5 227 aa12.04□□□□□ -0.48
ATG4B-226ENST00000625810 CSDC2Q9Y534 153 aaKnown RBP12.04□□□□□ -0.48
ATG4B-226ENST00000625810 COX7A2LO14548 114 aa12.03□□□□□ -0.48
ATG4B-226ENST00000625810 MRPL51Q4U2R6 128 aaKnown RBP12.03□□□□□ -0.48
ATG4B-226ENST00000625810 RNASE13Q5GAN3 156 aaKnown RBP12.03□□□□□ -0.48
ATG4B-226ENST00000625810 FAM104BQ5XKR9 115 aa12.03□□□□□ -0.48
ATG4B-226ENST00000625810 TMEM18Q96B42 140 aa12.03□□□□□ -0.48
ATG4B-226ENST00000625810 UBE2D4Q9Y2X8 147 aa12.03□□□□□ -0.48
ATG4B-226ENST00000625810 TNXBP22105 4242 aa12.03□□□□□ -0.48
ATG4B-226ENST00000625810 TRAV13-1A0A0B4J241 112 aa12.02□□□□□ -0.49
ATG4B-226ENST00000625810 PRR3P79522 188 aaKnown RBP12.02□□□□□ -0.49
ATG4B-226ENST00000625810 IGLV4-69A0A075B6H9 119 aa12.01□□□□□ -0.49
ATG4B-226ENST00000625810 SMIM27A0A1W2PRY6 76 aa12.01□□□□□ -0.49
ATG4B-226ENST00000625810 LINC00862A6NCI5 91 aa12.01□□□□□ -0.49
ATG4B-226ENST00000625810 CKS2P33552 79 aa12.01□□□□□ -0.49
ATG4B-226ENST00000625810 PEA15Q15121 130 aa12.01□□□□□ -0.49
ATG4B-226ENST00000625810 C9JQL5 133 aa12□□□□□ -0.49
ATG4B-226ENST00000625810 C20orf78Q9BR46 151 aa12□□□□□ -0.49
ATG4B-226ENST00000625810 LOC107984640A0A0U1RRK4 108 aa11.99□□□□□ -0.49
ATG4B-226ENST00000625810 A0A1B0GW15 77 aa11.99□□□□□ -0.49
ATG4B-226ENST00000625810 GAGE2BQ13066 116 aa11.99□□□□□ -0.49
ATG4B-226ENST00000625810 CAMK2N2Q96S95 79 aa11.99□□□□□ -0.49
ATG4B-226ENST00000625810 APOMO95445 188 aa11.98□□□□□ -0.49
ATG4B-226ENST00000625810 PTTG1IPP53801 180 aa11.98□□□□□ -0.49
ATG4B-226ENST00000625810 Q6ZUT4 128 aa11.98□□□□□ -0.49
ATG4B-226ENST00000625810 C5orf38Q86SI9 138 aa11.98□□□□□ -0.49
ATG4B-226ENST00000625810 TIMM21Q9BVV7 248 aa11.98□□□□□ -0.49
ATG4B-226ENST00000625810 TRBV24-1A0A075B6N3 115 aa11.97□□□□□ -0.49
ATG4B-226ENST00000625810 A0A1B0GVG6 124 aa11.97□□□□□ -0.49
ATG4B-226ENST00000625810 TCAPO15273 167 aa11.97□□□□□ -0.49
ATG4B-226ENST00000625810 S100A8P05109 93 aa11.97□□□□□ -0.49
ATG4B-226ENST00000625810 SRSF3P84103 164 aaKnown RBP11.97□□□□□ -0.49
ATG4B-226ENST00000625810 F8W036 122 aa11.96□□□□□ -0.49
ATG4B-226ENST00000625810 TNFRSF6BO95407 300 aa11.96□□□□□ -0.49
ATG4B-226ENST00000625810 RPL32P62910 135 aaKnown RBP11.96□□□□□ -0.49
ATG4B-226ENST00000625810 MRPL54Q6P161 138 aaKnown RBP11.96□□□□□ -0.49
ATG4B-226ENST00000625810 SMDT1Q9H4I9 107 aa11.96□□□□□ -0.49
ATG4B-226ENST00000625810 HBBP68871 147 aa11.95□□□□□ -0.5
ATG4B-226ENST00000625810 Q6ZRP5 223 aa11.95□□□□□ -0.5
ATG4B-226ENST00000625810 C2orf48Q96LS8 159 aa11.95□□□□□ -0.5
ATG4B-226ENST00000625810 LINC01600Q96MT4 127 aa11.95□□□□□ -0.5
ATG4B-226ENST00000625810 D6R8Y8 96 aa11.94□□□□□ -0.5
ATG4B-226ENST00000625810 RPL39P62891 51 aaKnown RBP11.94□□□□□ -0.5
ATG4B-226ENST00000625810 SPINK6Q6UWN8 80 aa11.94□□□□□ -0.5
ATG4B-226ENST00000625810 SMIM2Q9BVW6 85 aa11.94□□□□□ -0.5
ATG4B-226ENST00000625810 SPAG11BQ08648 103 aa11.93□□□□□ -0.5
ATG4B-226ENST00000625810 REG3GQ6UW15 175 aa11.92□□□□□ -0.5
ATG4B-226ENST00000625810 NPYP01303 97 aa11.91□□□□□ -0.5
ATG4B-226ENST00000625810 RPL18AQ02543 176 aaKnown RBP11.91□□□□□ -0.5
ATG4B-226ENST00000625810 SPANXA1Q9NS26 97 aa11.91□□□□□ -0.5
ATG4B-226ENST00000625810 A0A1W2PNN7 141 aa11.9□□□□□ -0.5
ATG4B-226ENST00000625810 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms