RNA–Protein interactions for RNA: ENST00000623364.3

CDKL5-204, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 3

Gene CDKL5, Length 483 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-204ENST00000623364 F8WDY8 70 aa3.06□□□□□ -1.92
CDKL5-204ENST00000623364 H3BP45 60 aa3.06□□□□□ -1.92
CDKL5-204ENST00000623364 NDUFA1O15239 70 aa3.06□□□□□ -1.92
CDKL5-204ENST00000623364 ZNF80P51504 273 aaPredicted RBP3.06□□□□□ -1.92
CDKL5-204ENST00000623364 IFITM3Q01628 133 aa3.06□□□□□ -1.92
CDKL5-204ENST00000623364 TMEM128Q5BJH2 165 aa3.06□□□□□ -1.92
CDKL5-204ENST00000623364 RNASEKQ6P5S7 137 aaKnown RBP3.06□□□□□ -1.92
CDKL5-204ENST00000623364 AKAP14Q86UN6 197 aa3.06□□□□□ -1.92
CDKL5-204ENST00000623364 C11orf1Q9H5F2 150 aa3.06□□□□□ -1.92
CDKL5-204ENST00000623364 RPL37AP8A6NKH3 93 aa3.05□□□□□ -1.92
CDKL5-204ENST00000623364 G3V3Q6 166 aa3.05□□□□□ -1.92
CDKL5-204ENST00000623364 L7N2F9 121 aa3.05□□□□□ -1.92
CDKL5-204ENST00000623364 CST7O76096 145 aa3.05□□□□□ -1.92
CDKL5-204ENST00000623364 GCGP01275 180 aa3.05□□□□□ -1.92
CDKL5-204ENST00000623364 CD3DP04234 171 aa3.05□□□□□ -1.92
CDKL5-204ENST00000623364 ARMS2P0C7Q2 107 aa3.05□□□□□ -1.92
CDKL5-204ENST00000623364 TAGLN2P37802 199 aaKnown RBP3.05□□□□□ -1.92
CDKL5-204ENST00000623364 RANP62826 216 aaKnown RBP3.05□□□□□ -1.92
CDKL5-204ENST00000623364 VAMP2P63027 116 aa3.05□□□□□ -1.92
CDKL5-204ENST00000623364 KRTAP8-1Q8IUC2 63 aa3.05□□□□□ -1.92
CDKL5-204ENST00000623364 PHYHIPLQ96FC7 376 aa3.05□□□□□ -1.92
CDKL5-204ENST00000623364 HYLS1Q96M11 299 aa3.05□□□□□ -1.92
CDKL5-204ENST00000623364 SHPKQ9UHJ6 478 aa3.05□□□□□ -1.92
CDKL5-204ENST00000623364 C14orf166Q9Y224 244 aaKnown RBP3.05□□□□□ -1.92
CDKL5-204ENST00000623364 C7orf66A4D0T2 115 aa3.04□□□□□ -1.92
CDKL5-204ENST00000623364 SYNGR2O43760 224 aa3.04□□□□□ -1.92
CDKL5-204ENST00000623364 SSNA1O43805 119 aa3.04□□□□□ -1.92
CDKL5-204ENST00000623364 PET100P0DJ07 73 aa3.04□□□□□ -1.92
CDKL5-204ENST00000623364 TPT1P13693 172 aaKnown RBP3.04□□□□□ -1.92
CDKL5-204ENST00000623364 FGF7P21781 194 aa3.04□□□□□ -1.92
CDKL5-204ENST00000623364 MT4P47944 62 aa3.04□□□□□ -1.92
CDKL5-204ENST00000623364 PRLHP81277 87 aa3.04□□□□□ -1.92
CDKL5-204ENST00000623364 SCGB2B2Q4G0G5 96 aa3.04□□□□□ -1.92
CDKL5-204ENST00000623364 TCTE3Q8IZS6 198 aa3.04□□□□□ -1.92
CDKL5-204ENST00000623364 ZFP82Q8N141 532 aa3.04□□□□□ -1.92
CDKL5-204ENST00000623364 CMTM2Q8TAZ6 248 aa3.04□□□□□ -1.92
CDKL5-204ENST00000623364 MGST2Q99735 147 aa3.04□□□□□ -1.92
CDKL5-204ENST00000623364 GNB1LQ9BYB4 327 aa3.04□□□□□ -1.92
CDKL5-204ENST00000623364 NUDT15Q9NV35 164 aa3.04□□□□□ -1.92
CDKL5-204ENST00000623364 IGKV3D-20A0A0C4DH25 116 aa3.03□□□□□ -1.92
CDKL5-204ENST00000623364 CAMLGP49069 296 aa3.03□□□□□ -1.92
CDKL5-204ENST00000623364 PPP1R1AQ13522 171 aa3.03□□□□□ -1.92
CDKL5-204ENST00000623364 MIC13Q5XKP0 118 aa3.03□□□□□ -1.92
CDKL5-204ENST00000623364 ATP11AUNQ6ZP68 121 aa3.03□□□□□ -1.92
CDKL5-204ENST00000623364 GOLT1AQ6ZVE7 132 aa3.03□□□□□ -1.92
CDKL5-204ENST00000623364 OR5C1Q8NGR4 320 aa3.03□□□□□ -1.92
CDKL5-204ENST00000623364 GEMIN7Q9H840 131 aaKnown RBP3.03□□□□□ -1.92
CDKL5-204ENST00000623364 C6orf48Q9UBA6 75 aa3.03□□□□□ -1.92
CDKL5-204ENST00000623364 GPR132Q9UNW8 380 aa3.03□□□□□ -1.92
CDKL5-204ENST00000623364 HMSDA8MTL9 139 aa3.02□□□□□ -1.93
CDKL5-204ENST00000623364 NDUFC2-KCTD14E9PQ53 114 aa3.02□□□□□ -1.93
CDKL5-204ENST00000623364 HMGB3O15347 200 aaKnown RBP3.02□□□□□ -1.93
CDKL5-204ENST00000623364 SFT2D2O95562 160 aa3.02□□□□□ -1.93
CDKL5-204ENST00000623364 GIPP09681 153 aaPredicted RBP3.02□□□□□ -1.93
CDKL5-204ENST00000623364 SLC25A6P12236 298 aa3.02□□□□□ -1.93
CDKL5-204ENST00000623364 RPL12P30050 165 aaKnown RBP3.02□□□□□ -1.93
CDKL5-204ENST00000623364 BTCP35070 178 aa3.02□□□□□ -1.93
CDKL5-204ENST00000623364 COTL1Q14019 142 aa3.02□□□□□ -1.93
CDKL5-204ENST00000623364 C10orf25Q5T742 122 aa3.02□□□□□ -1.93
CDKL5-204ENST00000623364 UNQ6190/PRO20217Q6UXQ8 127 aa3.02□□□□□ -1.93
CDKL5-204ENST00000623364 FAM231DQ6ZW35 169 aa3.02□□□□□ -1.93
CDKL5-204ENST00000623364 ZCCHC13Q8WW36 166 aaKnown RBP3.02□□□□□ -1.93
CDKL5-204ENST00000623364 SPRR4Q96PI1 79 aa3.02□□□□□ -1.93
CDKL5-204ENST00000623364 SLC25A2Q9BXI2 301 aa3.02□□□□□ -1.93
CDKL5-204ENST00000623364 ALG5Q9Y673 324 aa3.02□□□□□ -1.93
CDKL5-204ENST00000623364 MUC5BQ9HC84 5762 aaPredicted RBP3.01□□□□□ -1.93
CDKL5-204ENST00000623364 C9orf170A2RU37 121 aa3.01□□□□□ -1.93
CDKL5-204ENST00000623364 A8MWP4 228 aa3.01□□□□□ -1.93
CDKL5-204ENST00000623364 B4DEV8 164 aa3.01□□□□□ -1.93
CDKL5-204ENST00000623364 PVALBP20472 110 aaPredicted RBP3.01□□□□□ -1.93
CDKL5-204ENST00000623364 NDUFA5Q16718 116 aa3.01□□□□□ -1.93
CDKL5-204ENST00000623364 SMUG1Q53HV7 270 aa3.01□□□□□ -1.93
CDKL5-204ENST00000623364 CBLN2Q8IUK8 224 aa3.01□□□□□ -1.93
CDKL5-204ENST00000623364 THAP6Q8TBB0 222 aa3.01□□□□□ -1.93
CDKL5-204ENST00000623364 SGK494Q96LW2 274 aa3.01□□□□□ -1.93
CDKL5-204ENST00000623364 LINC00167Q96N53 147 aa3.01□□□□□ -1.93
CDKL5-204ENST00000623364 RTBDNQ9BSG5 229 aaPredicted RBP3.01□□□□□ -1.93
CDKL5-204ENST00000623364 ZNF706Q9Y5V0 76 aaPredicted RBP3.01□□□□□ -1.93
CDKL5-204ENST00000623364 NKX2-5P52952 324 aaPredicted RBP3□□□□□ -1.93
CDKL5-204ENST00000623364 UBE2G2P60604 165 aa3□□□□□ -1.93
CDKL5-204ENST00000623364 PNRC1Q12796 327 aaPredicted RBP3□□□□□ -1.93
CDKL5-204ENST00000623364 FAM74A1Q5RGS3 127 aa3□□□□□ -1.93
CDKL5-204ENST00000623364 DNLZQ5SXM8 178 aa3□□□□□ -1.93
CDKL5-204ENST00000623364 SSBP3-AS1Q7Z2R9 100 aa3□□□□□ -1.93
CDKL5-204ENST00000623364 FAM19A1Q7Z5A9 133 aa3□□□□□ -1.93
CDKL5-204ENST00000623364 LINC01551Q86U37 167 aa3□□□□□ -1.93
CDKL5-204ENST00000623364 FXYD5Q96DB9 178 aa3□□□□□ -1.93
CDKL5-204ENST00000623364 TMEM101Q96IK0 257 aa3□□□□□ -1.93
CDKL5-204ENST00000623364 SEC22CQ9BRL7 303 aa3□□□□□ -1.93
CDKL5-204ENST00000623364 CYTL1Q9NRR1 136 aa3□□□□□ -1.93
CDKL5-204ENST00000623364 H7C423 109 aa2.99□□□□□ -1.93
CDKL5-204ENST00000623364 TSC22D2O75157 780 aa2.99□□□□□ -1.93
CDKL5-204ENST00000623364 ZNF25P17030 456 aaPredicted RBP2.99□□□□□ -1.93
CDKL5-204ENST00000623364 TAS2R30P59541 319 aa2.99□□□□□ -1.93
CDKL5-204ENST00000623364 RAB14P61106 215 aa2.99□□□□□ -1.93
CDKL5-204ENST00000623364 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.99□□□□□ -1.93
CDKL5-204ENST00000623364 FAAP20Q6NZ36 180 aa2.99□□□□□ -1.93
CDKL5-204ENST00000623364 FAM167A-AS1Q96KT0 104 aa2.99□□□□□ -1.93
CDKL5-204ENST00000623364 PSENENQ9NZ42 101 aa2.99□□□□□ -1.93
CDKL5-204ENST00000623364 KANTRA0A1W2PQU2 76 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms