RNA–Protein interactions for RNA: ENST00000623266.1

PCDHB9-202, Transcript of protocadherin beta 9, humanhuman

TSL 4

Gene PCDHB9, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9-202ENST00000623266 XCL1P47992 114 aa5.66□□□□□ -1.5
PCDHB9-202ENST00000623266 PRR3P79522 188 aaKnown RBP5.66□□□□□ -1.5
PCDHB9-202ENST00000623266 C7orf33Q8WU49 177 aa5.66□□□□□ -1.5
PCDHB9-202ENST00000623266 TMEM250H0YL14 139 aa5.65□□□□□ -1.5
PCDHB9-202ENST00000623266 APCSP02743 223 aa5.65□□□□□ -1.5
PCDHB9-202ENST00000623266 ZNF25P17030 456 aaPredicted RBP5.65□□□□□ -1.5
PCDHB9-202ENST00000623266 SMIM15Q7Z3B0 74 aa5.65□□□□□ -1.5
PCDHB9-202ENST00000623266 IGHV1-58A0A0C4DH39 117 aa5.64□□□□□ -1.51
PCDHB9-202ENST00000623266 A0A0J9YXV3 536 aa5.64□□□□□ -1.51
PCDHB9-202ENST00000623266 TRBV27A0A0K0K1C4 114 aa5.64□□□□□ -1.51
PCDHB9-202ENST00000623266 A0A1W2PNN7 141 aa5.64□□□□□ -1.51
PCDHB9-202ENST00000623266 CD164L2Q6UWJ8 174 aa5.64□□□□□ -1.51
PCDHB9-202ENST00000623266 MRPL52Q86TS9 123 aaKnown RBP5.64□□□□□ -1.51
PCDHB9-202ENST00000623266 ZNF664Q8N3J9 261 aa5.64□□□□□ -1.51
PCDHB9-202ENST00000623266 TMEM191AQ9H0A3 160 aa5.64□□□□□ -1.51
PCDHB9-202ENST00000623266 ST20Q9HBF5 79 aa5.64□□□□□ -1.51
PCDHB9-202ENST00000623266 TMEM242Q9NWH2 141 aa5.64□□□□□ -1.51
PCDHB9-202ENST00000623266 SMKR1H3BMG3 65 aa5.63□□□□□ -1.51
PCDHB9-202ENST00000623266 BLOC1S1P78537 153 aa5.63□□□□□ -1.51
PCDHB9-202ENST00000623266 SYCNQ0VAF6 134 aa5.63□□□□□ -1.51
PCDHB9-202ENST00000623266 SS18Q15532 418 aa5.63□□□□□ -1.51
PCDHB9-202ENST00000623266 CT83Q5H943 113 aa5.63□□□□□ -1.51
PCDHB9-202ENST00000623266 SPINK6Q6UWN8 80 aa5.63□□□□□ -1.51
PCDHB9-202ENST00000623266 ALKAL2Q6UX46 152 aa5.63□□□□□ -1.51
PCDHB9-202ENST00000623266 AMN1Q8IY45 258 aa5.63□□□□□ -1.51
PCDHB9-202ENST00000623266 TMEM101Q96IK0 257 aa5.63□□□□□ -1.51
PCDHB9-202ENST00000623266 BTF3L4Q96K17 158 aa5.63□□□□□ -1.51
PCDHB9-202ENST00000623266 IGLV4-69A0A075B6H9 119 aa5.62□□□□□ -1.51
PCDHB9-202ENST00000623266 A0A1B0GUT8 65 aa5.62□□□□□ -1.51
PCDHB9-202ENST00000623266 HIGD1CA8MV81 97 aa5.62□□□□□ -1.51
PCDHB9-202ENST00000623266 LINC01551Q86U37 167 aa5.62□□□□□ -1.51
PCDHB9-202ENST00000623266 NRACQ8N912 160 aa5.62□□□□□ -1.51
PCDHB9-202ENST00000623266 TSKUQ8WUA8 353 aa5.62□□□□□ -1.51
PCDHB9-202ENST00000623266 FAM104AQ969W3 186 aa5.62□□□□□ -1.51
PCDHB9-202ENST00000623266 CARD19Q96LW7 228 aa5.62□□□□□ -1.51
PCDHB9-202ENST00000623266 FAM210AQ96ND0 272 aa5.62□□□□□ -1.51
PCDHB9-202ENST00000623266 OSTCQ9NRP0 149 aa5.62□□□□□ -1.51
PCDHB9-202ENST00000623266 ZNF561-AS1K7EIQ3 104 aa5.61□□□□□ -1.51
PCDHB9-202ENST00000623266 VCYO14598 125 aa5.61□□□□□ -1.51
PCDHB9-202ENST00000623266 SRP19P09132 144 aaKnown RBP5.61□□□□□ -1.51
PCDHB9-202ENST00000623266 CEBPGP53567 150 aa5.61□□□□□ -1.51
PCDHB9-202ENST00000623266 PTTG1IPP53801 180 aa5.61□□□□□ -1.51
PCDHB9-202ENST00000623266 Q6ZRP5 223 aa5.61□□□□□ -1.51
PCDHB9-202ENST00000623266 NUP35Q8NFH5 326 aa5.61□□□□□ -1.51
PCDHB9-202ENST00000623266 MRAP2Q96G30 205 aa5.61□□□□□ -1.51
PCDHB9-202ENST00000623266 LINC00474Q9P2X8 69 aa5.61□□□□□ -1.51
PCDHB9-202ENST00000623266 CSDC2Q9Y534 153 aaKnown RBP5.61□□□□□ -1.51
PCDHB9-202ENST00000623266 V9GYV3 84 aa5.61□□□□□ -1.51
PCDHB9-202ENST00000623266 C1orf196B1AJZ1 125 aa5.6□□□□□ -1.51
PCDHB9-202ENST00000623266 GAGE2BQ13066 116 aa5.6□□□□□ -1.51
PCDHB9-202ENST00000623266 RNASE13Q5GAN3 156 aaKnown RBP5.6□□□□□ -1.51
PCDHB9-202ENST00000623266 UBE2D4Q9Y2X8 147 aa5.6□□□□□ -1.51
PCDHB9-202ENST00000623266 C7orf77A4D0Y5 90 aa5.59□□□□□ -1.51
PCDHB9-202ENST00000623266 ZNF727A8MUV8 499 aa5.59□□□□□ -1.51
PCDHB9-202ENST00000623266 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.59□□□□□ -1.51
PCDHB9-202ENST00000623266 CAMPP49913 170 aa5.59□□□□□ -1.51
PCDHB9-202ENST00000623266 C5orf38Q86SI9 138 aa5.59□□□□□ -1.51
PCDHB9-202ENST00000623266 OPRPNQ99935 248 aaPredicted RBP5.59□□□□□ -1.51
PCDHB9-202ENST00000623266 SMIM7Q9BQ49 75 aa5.59□□□□□ -1.51
PCDHB9-202ENST00000623266 EIF5A2Q9GZV4 153 aaKnown RBP5.59□□□□□ -1.51
PCDHB9-202ENST00000623266 LOC107984640A0A0U1RRK4 108 aa5.58□□□□□ -1.52
PCDHB9-202ENST00000623266 C9JQL5 133 aa5.58□□□□□ -1.52
PCDHB9-202ENST00000623266 COX7A2LO14548 114 aa5.58□□□□□ -1.52
PCDHB9-202ENST00000623266 SUMO2P61956 95 aaKnown RBP5.58□□□□□ -1.52
PCDHB9-202ENST00000623266 MRPL51Q4U2R6 128 aaKnown RBP5.58□□□□□ -1.52
PCDHB9-202ENST00000623266 C9orf116Q5BN46 136 aaPredicted RBP5.58□□□□□ -1.52
PCDHB9-202ENST00000623266 FAM104BQ5XKR9 115 aa5.58□□□□□ -1.52
PCDHB9-202ENST00000623266 REG3GQ6UW15 175 aa5.58□□□□□ -1.52
PCDHB9-202ENST00000623266 KRTAP11-1Q8IUC1 163 aa5.58□□□□□ -1.52
PCDHB9-202ENST00000623266 BORCS7Q96B45 105 aa5.58□□□□□ -1.52
PCDHB9-202ENST00000623266 C2orf48Q96LS8 159 aa5.58□□□□□ -1.52
PCDHB9-202ENST00000623266 PSORS1C2Q9UIG4 136 aa5.58□□□□□ -1.52
PCDHB9-202ENST00000623266 TRBV24-1A0A075B6N3 115 aa5.57□□□□□ -1.52
PCDHB9-202ENST00000623266 TRAV13-1A0A0B4J241 112 aa5.57□□□□□ -1.52
PCDHB9-202ENST00000623266 RPL23P62829 140 aaKnown RBP5.57□□□□□ -1.52
PCDHB9-202ENST00000623266 RPL39P62891 51 aaKnown RBP5.57□□□□□ -1.52
PCDHB9-202ENST00000623266 RIGQ13278 110 aa5.57□□□□□ -1.52
PCDHB9-202ENST00000623266 TMEM241Q24JQ0 296 aa5.57□□□□□ -1.52
PCDHB9-202ENST00000623266 PHF5AQ7RTV0 110 aaKnown RBP5.57□□□□□ -1.52
PCDHB9-202ENST00000623266 ISOC2Q96AB3 205 aa5.57□□□□□ -1.52
PCDHB9-202ENST00000623266 TIMM21Q9BVV7 248 aa5.57□□□□□ -1.52
PCDHB9-202ENST00000623266 IGHV3OR16-9A0A0B4J2B5 98 aa5.56□□□□□ -1.52
PCDHB9-202ENST00000623266 APOMO95445 188 aa5.56□□□□□ -1.52
PCDHB9-202ENST00000623266 MALP21145 153 aa5.56□□□□□ -1.52
PCDHB9-202ENST00000623266 FCER1GP30273 86 aa5.56□□□□□ -1.52
PCDHB9-202ENST00000623266 RNF151Q2KHN1 245 aa5.56□□□□□ -1.52
PCDHB9-202ENST00000623266 FAM74A3Q4VXF1 159 aa5.56□□□□□ -1.52
PCDHB9-202ENST00000623266 C10orf25Q5T742 122 aa5.56□□□□□ -1.52
PCDHB9-202ENST00000623266 Q6ZUT4 128 aa5.56□□□□□ -1.52
PCDHB9-202ENST00000623266 KRTAP7-1Q8IUC3 87 aa5.56□□□□□ -1.52
PCDHB9-202ENST00000623266 CAMK2N2Q96S95 79 aa5.56□□□□□ -1.52
PCDHB9-202ENST00000623266 TMA7Q9Y2S6 64 aaKnown RBP5.56□□□□□ -1.52
PCDHB9-202ENST00000623266 SMIM27A0A1W2PRY6 76 aa5.55□□□□□ -1.52
PCDHB9-202ENST00000623266 LINC00862A6NCI5 91 aa5.55□□□□□ -1.52
PCDHB9-202ENST00000623266 PPP1R17O96001 155 aa5.55□□□□□ -1.52
PCDHB9-202ENST00000623266 SRSF3P84103 164 aaKnown RBP5.55□□□□□ -1.52
PCDHB9-202ENST00000623266 AKAP14Q86UN6 197 aa5.55□□□□□ -1.52
PCDHB9-202ENST00000623266 KIR2DL4Q99706 377 aa5.55□□□□□ -1.52
PCDHB9-202ENST00000623266 PKIGQ9Y2B9 76 aa5.55□□□□□ -1.52
PCDHB9-202ENST00000623266 hCG_2014768A0A024R1R8 64 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms