RNA–Protein interactions for RNA: ENST00000622309.4

VPS11-209, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 3,352 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-209ENST00000622309 BUB1B-PAK6H3BSN5 160 aa5.85□□□□□ -1.47
VPS11-209ENST00000622309 XCL1P47992 114 aa5.85□□□□□ -1.47
VPS11-209ENST00000622309 RBM3P98179 157 aaKnown RBP5.85□□□□□ -1.47
VPS11-209ENST00000622309 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.85□□□□□ -1.47
VPS11-209ENST00000622309 C22orf34Q6ZV56 151 aa5.85□□□□□ -1.47
VPS11-209ENST00000622309 XCL2Q9UBD3 114 aa5.85□□□□□ -1.47
VPS11-209ENST00000622309 SVEP1Q4LDE5 3571 aa5.85□□□□□ -1.47
VPS11-209ENST00000622309 TRAV23DV6A0A075B6W5 121 aa5.84□□□□□ -1.47
VPS11-209ENST00000622309 IGHV4OR15-8A0A075B7B6 117 aa5.84□□□□□ -1.47
VPS11-209ENST00000622309 A0A087WW49 117 aa5.84□□□□□ -1.47
VPS11-209ENST00000622309 A0A0A0MQY5 61 aa5.84□□□□□ -1.47
VPS11-209ENST00000622309 IGHV1-58A0A0C4DH39 117 aa5.84□□□□□ -1.47
VPS11-209ENST00000622309 IGHV1-46P01743 117 aa5.84□□□□□ -1.47
VPS11-209ENST00000622309 C14orf132Q9NPU4 83 aa5.84□□□□□ -1.47
VPS11-209ENST00000622309 LINC00846Q9NV44 126 aa5.84□□□□□ -1.47
VPS11-209ENST00000622309 UBR5O95071 2799 aaPredicted RBP5.84□□□□□ -1.47
VPS11-209ENST00000622309 HILS1P60008 231 aa5.84□□□□□ -1.47
VPS11-209ENST00000622309 Q9HAA7 133 aa5.84□□□□□ -1.47
VPS11-209ENST00000622309 UBE2D4Q9Y2X8 147 aa5.84□□□□□ -1.47
VPS11-209ENST00000622309 PRRC2AP48634 2157 aaKnown RBP5.84□□□□□ -1.47
VPS11-209ENST00000622309 IGHV3OR16-13A0A075B7E8 117 aa5.84□□□□□ -1.48
VPS11-209ENST00000622309 IGHV3-74A0A0B4J1X5 117 aa5.84□□□□□ -1.48
VPS11-209ENST00000622309 IGHV1-8P0DP01 117 aa5.84□□□□□ -1.48
VPS11-209ENST00000622309 MRPS36P82909 103 aaKnown RBP5.84□□□□□ -1.48
VPS11-209ENST00000622309 SUMO4Q6EEV6 95 aa5.84□□□□□ -1.48
VPS11-209ENST00000622309 C9orf47Q6ZRZ4 202 aa5.84□□□□□ -1.48
VPS11-209ENST00000622309 CCDC140Q96MF4 163 aa5.84□□□□□ -1.48
VPS11-209ENST00000622309 FAM215AQ9Y5M1 114 aa5.84□□□□□ -1.48
VPS11-209ENST00000622309 CSMD1Q96PZ7 3565 aa5.84□□□□□ -1.48
VPS11-209ENST00000622309 EPM2AB3EWF7 344 aa5.83□□□□□ -1.48
VPS11-209ENST00000622309 F6UB75 175 aa5.83□□□□□ -1.48
VPS11-209ENST00000622309 C11orf68Q9H3H3 251 aaKnown RBP5.83□□□□□ -1.48
VPS11-209ENST00000622309 C16orf95Q9H693 158 aa5.83□□□□□ -1.48
VPS11-209ENST00000622309 SLC25A15Q9Y619 301 aa5.83□□□□□ -1.48
VPS11-209ENST00000622309 PRR9Q5T870 116 aa5.83□□□□□ -1.48
VPS11-209ENST00000622309 VSIG2Q96IQ7 327 aa5.83□□□□□ -1.48
VPS11-209ENST00000622309 FP248Q71RG6 208 aaPredicted RBP5.83□□□□□ -1.48
VPS11-209ENST00000622309 RAI1Q7Z5J4 1906 aaPredicted RBP5.83□□□□□ -1.48
VPS11-209ENST00000622309 UNC79Q9P2D8 2635 aa5.82□□□□□ -1.48
VPS11-209ENST00000622309 TRBV27A0A0K0K1C4 114 aa5.82□□□□□ -1.48
VPS11-209ENST00000622309 GNRH2O43555 120 aa5.82□□□□□ -1.48
VPS11-209ENST00000622309 RPL11P62913 178 aaKnown RBP5.82□□□□□ -1.48
VPS11-209ENST00000622309 IGLV11-55A0A075B6I3 123 aa5.82□□□□□ -1.48
VPS11-209ENST00000622309 F8W735 103 aaPredicted RBP5.82□□□□□ -1.48
VPS11-209ENST00000622309 TIMM17BO60830 172 aa5.82□□□□□ -1.48
VPS11-209ENST00000622309 TRBV12-3P01733 135 aa5.82□□□□□ -1.48
VPS11-209ENST00000622309 CTSGP08311 255 aa5.82□□□□□ -1.48
VPS11-209ENST00000622309 CD28P10747 220 aa5.82□□□□□ -1.48
VPS11-209ENST00000622309 BEAN1Q3B7T3 259 aa5.82□□□□□ -1.48
VPS11-209ENST00000622309 FAM74A4Q5TZK3 123 aa5.82□□□□□ -1.48
VPS11-209ENST00000622309 IGLV4-3A0A075B6K6 122 aa5.81□□□□□ -1.48
VPS11-209ENST00000622309 IGHV3-49A0A0A0MS15 119 aa5.81□□□□□ -1.48
VPS11-209ENST00000622309 MED14OSP0DP75 135 aa5.81□□□□□ -1.48
VPS11-209ENST00000622309 HOXD3P31249 432 aaPredicted RBP5.81□□□□□ -1.48
VPS11-209ENST00000622309 RNF5Q99942 180 aa5.81□□□□□ -1.48
VPS11-209ENST00000622309 RBM12B-AS1Q9P1G2 102 aa5.81□□□□□ -1.48
VPS11-209ENST00000622309 SOCS3O14543 225 aa5.81□□□□□ -1.48
VPS11-209ENST00000622309 COX7A1P24310 79 aa5.81□□□□□ -1.48
VPS11-209ENST00000622309 RNASE4P34096 147 aaKnown RBP5.81□□□□□ -1.48
VPS11-209ENST00000622309 VMO1Q7Z5L0 202 aa5.81□□□□□ -1.48
VPS11-209ENST00000622309 MDFIQ99750 246 aa5.81□□□□□ -1.48
VPS11-209ENST00000622309 C22orf24Q9Y442 160 aa5.81□□□□□ -1.48
VPS11-209ENST00000622309 H7BZZ5 65 aa5.81□□□□□ -1.48
VPS11-209ENST00000622309 Q8N2B8 174 aa5.81□□□□□ -1.48
VPS11-209ENST00000622309 C20orf203Q8NBC4 194 aa5.81□□□□□ -1.48
VPS11-209ENST00000622309 MPLKIPQ8TAP9 179 aa5.81□□□□□ -1.48
VPS11-209ENST00000622309 LENEPQ9Y5L5 61 aa5.81□□□□□ -1.48
VPS11-209ENST00000622309 IGLV3-9A0A075B6K5 115 aa5.8□□□□□ -1.48
VPS11-209ENST00000622309 RPL28P46779 137 aaKnown RBP5.8□□□□□ -1.48
VPS11-209ENST00000622309 SNRPD3P62318 126 aaKnown RBP5.8□□□□□ -1.48
VPS11-209ENST00000622309 LYPD2Q6UXB3 125 aa5.8□□□□□ -1.48
VPS11-209ENST00000622309 LINC00308Q8TCZ7 52 aa5.8□□□□□ -1.48
VPS11-209ENST00000622309 FAM218AQ96MZ4 157 aa5.8□□□□□ -1.48
VPS11-209ENST00000622309 DCHS2Q6V1P9 2916 aa5.8□□□□□ -1.48
VPS11-209ENST00000622309 USP9XQ93008 2570 aaPredicted RBP5.8□□□□□ -1.48
VPS11-209ENST00000622309 MYO9AB2RTY4 2548 aa5.8□□□□□ -1.48
VPS11-209ENST00000622309 LINC00315P59091 139 aa5.8□□□□□ -1.48
VPS11-209ENST00000622309 OVOL2Q9BRP0 275 aa5.8□□□□□ -1.48
VPS11-209ENST00000622309 LINC00474Q9P2X8 69 aa5.8□□□□□ -1.48
VPS11-209ENST00000622309 KIF25-AS1Q9Y6Z4 181 aa5.8□□□□□ -1.48
VPS11-209ENST00000622309 DOPEY2Q9Y3R5 2298 aa5.79□□□□□ -1.48
VPS11-209ENST00000622309 TRBV6-5A0A0K0K1A5 114 aa5.79□□□□□ -1.48
VPS11-209ENST00000622309 RNASE3P12724 160 aaKnown RBP5.79□□□□□ -1.48
VPS11-209ENST00000622309 WFDC9Q8NEX5 89 aa5.79□□□□□ -1.48
VPS11-209ENST00000622309 RNASE6Q93091 150 aaKnown RBP5.79□□□□□ -1.48
VPS11-209ENST00000622309 TRBV7-6A0A0J9YX20 115 aa5.79□□□□□ -1.48
VPS11-209ENST00000622309 CLPSL1A2RUU4 121 aa5.79□□□□□ -1.48
VPS11-209ENST00000622309 LYNX1G3V0Z9 82 aa5.79□□□□□ -1.48
VPS11-209ENST00000622309 LYNX1P0DP58 116 aa5.79□□□□□ -1.48
VPS11-209ENST00000622309 ANKHD1Q8IWZ3 2542 aaKnown RBP5.78□□□□□ -1.48
VPS11-209ENST00000622309 ZFAND2AQ8N6M9 145 aa5.78□□□□□ -1.48
VPS11-209ENST00000622309 ZNF625Q96I27 306 aaPredicted RBP5.78□□□□□ -1.48
VPS11-209ENST00000622309 RNASE13Q5GAN3 156 aaKnown RBP5.78□□□□□ -1.48
VPS11-209ENST00000622309 ATP5EP2Q5VTU8 51 aa5.78□□□□□ -1.48
VPS11-209ENST00000622309 TEX15Q9BXT5 2789 aa5.78□□□□□ -1.48
VPS11-209ENST00000622309 IGLV1-47P01700 117 aa5.78□□□□□ -1.48
VPS11-209ENST00000622309 CCKP06307 115 aa5.78□□□□□ -1.48
VPS11-209ENST00000622309 LYPD5Q6UWN5 251 aa5.78□□□□□ -1.48
VPS11-209ENST00000622309 ENHOQ6UWT2 76 aa5.78□□□□□ -1.48
VPS11-209ENST00000622309 F8WEM9 126 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 102.7 ms