RNA–Protein interactions for RNA: ENST00000616289.1

PDLIM2-219, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 209 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-219ENST00000616289 A0A0J9YXV3 536 aa6.64□□□□□ -1.35
PDLIM2-219ENST00000616289 S100A1P23297 94 aa6.64□□□□□ -1.35
PDLIM2-219ENST00000616289 FAM231DQ6ZW35 169 aa6.64□□□□□ -1.35
PDLIM2-219ENST00000616289 TCTE3Q8IZS6 198 aa6.64□□□□□ -1.35
PDLIM2-219ENST00000616289 MRAP2Q96G30 205 aa6.64□□□□□ -1.35
PDLIM2-219ENST00000616289 LINC00474Q9P2X8 69 aa6.64□□□□□ -1.35
PDLIM2-219ENST00000616289 A8MWL6 223 aa6.63□□□□□ -1.35
PDLIM2-219ENST00000616289 TMEM250H0YL14 139 aa6.63□□□□□ -1.35
PDLIM2-219ENST00000616289 CT83Q5H943 113 aa6.63□□□□□ -1.35
PDLIM2-219ENST00000616289 SPINK6Q6UWN8 80 aa6.63□□□□□ -1.35
PDLIM2-219ENST00000616289 MRPL52Q86TS9 123 aaKnown RBP6.63□□□□□ -1.35
PDLIM2-219ENST00000616289 ST20Q9HBF5 79 aa6.63□□□□□ -1.35
PDLIM2-219ENST00000616289 CDC42SE2Q9NRR3 84 aa6.63□□□□□ -1.35
PDLIM2-219ENST00000616289 PKIGQ9Y2B9 76 aa6.63□□□□□ -1.35
PDLIM2-219ENST00000616289 CEBPGP53567 150 aa6.62□□□□□ -1.35
PDLIM2-219ENST00000616289 KRTAP10-8P60410 259 aa6.62□□□□□ -1.35
PDLIM2-219ENST00000616289 SYCNQ0VAF6 134 aa6.62□□□□□ -1.35
PDLIM2-219ENST00000616289 SS18Q15532 418 aa6.62□□□□□ -1.35
PDLIM2-219ENST00000616289 NDUFA5Q16718 116 aa6.62□□□□□ -1.35
PDLIM2-219ENST00000616289 CD164L2Q6UWJ8 174 aa6.62□□□□□ -1.35
PDLIM2-219ENST00000616289 TRBV27A0A0K0K1C4 114 aa6.61□□□□□ -1.35
PDLIM2-219ENST00000616289 C7orf77A4D0Y5 90 aa6.61□□□□□ -1.35
PDLIM2-219ENST00000616289 HIGD1CA8MV81 97 aa6.61□□□□□ -1.35
PDLIM2-219ENST00000616289 ZNF561-AS1K7EIQ3 104 aa6.61□□□□□ -1.35
PDLIM2-219ENST00000616289 CAMPP49913 170 aa6.61□□□□□ -1.35
PDLIM2-219ENST00000616289 PTTG1IPP53801 180 aa6.61□□□□□ -1.35
PDLIM2-219ENST00000616289 POLR2KP53803 58 aaKnown RBP6.61□□□□□ -1.35
PDLIM2-219ENST00000616289 SRSF9Q13242 221 aaKnown RBP eCLIP6.61□□□□□ -1.35
PDLIM2-219ENST00000616289 REG3GQ6UW15 175 aa6.61□□□□□ -1.35
PDLIM2-219ENST00000616289 Q6ZRP5 223 aa6.61□□□□□ -1.35
PDLIM2-219ENST00000616289 AMN1Q8IY45 258 aa6.61□□□□□ -1.35
PDLIM2-219ENST00000616289 ZNF664Q8N3J9 261 aa6.61□□□□□ -1.35
PDLIM2-219ENST00000616289 BORCS7Q96B45 105 aa6.61□□□□□ -1.35
PDLIM2-219ENST00000616289 TMEM191AQ9H0A3 160 aa6.61□□□□□ -1.35
PDLIM2-219ENST00000616289 IGLV4-69A0A075B6H9 119 aa6.6□□□□□ -1.35
PDLIM2-219ENST00000616289 A0A1B0GUT8 65 aa6.6□□□□□ -1.35
PDLIM2-219ENST00000616289 RAB4AP20338 218 aa6.6□□□□□ -1.35
PDLIM2-219ENST00000616289 ALKAL2Q6UX46 152 aa6.6□□□□□ -1.35
PDLIM2-219ENST00000616289 TSKUQ8WUA8 353 aa6.6□□□□□ -1.35
PDLIM2-219ENST00000616289 LPAP08519 4548 aa6.6□□□□□ -1.35
PDLIM2-219ENST00000616289 LOC107984640A0A0U1RRK4 108 aa6.59□□□□□ -1.35
PDLIM2-219ENST00000616289 SMKR1H3BMG3 65 aa6.59□□□□□ -1.35
PDLIM2-219ENST00000616289 GAGE2BQ13066 116 aa6.59□□□□□ -1.35
PDLIM2-219ENST00000616289 RNASE13Q5GAN3 156 aaKnown RBP6.59□□□□□ -1.35
PDLIM2-219ENST00000616289 LINC01551Q86U37 167 aa6.59□□□□□ -1.35
PDLIM2-219ENST00000616289 A0A1W2PNN7 141 aa6.58□□□□□ -1.36
PDLIM2-219ENST00000616289 COX7A2LO14548 114 aa6.58□□□□□ -1.36
PDLIM2-219ENST00000616289 MALP21145 153 aa6.58□□□□□ -1.36
PDLIM2-219ENST00000616289 BLOC1S1P78537 153 aa6.58□□□□□ -1.36
PDLIM2-219ENST00000616289 NUP35Q8NFH5 326 aa6.58□□□□□ -1.36
PDLIM2-219ENST00000616289 ISOC2Q96AB3 205 aa6.58□□□□□ -1.36
PDLIM2-219ENST00000616289 SMIM7Q9BQ49 75 aa6.58□□□□□ -1.36
PDLIM2-219ENST00000616289 UBE2D4Q9Y2X8 147 aa6.58□□□□□ -1.36
PDLIM2-219ENST00000616289 C1orf196B1AJZ1 125 aa6.57□□□□□ -1.36
PDLIM2-219ENST00000616289 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.57□□□□□ -1.36
PDLIM2-219ENST00000616289 APOMO95445 188 aa6.57□□□□□ -1.36
PDLIM2-219ENST00000616289 FCER1GP30273 86 aa6.57□□□□□ -1.36
PDLIM2-219ENST00000616289 Q6ZUT4 128 aa6.57□□□□□ -1.36
PDLIM2-219ENST00000616289 AKAP14Q86UN6 197 aa6.57□□□□□ -1.36
PDLIM2-219ENST00000616289 NRACQ8N912 160 aa6.57□□□□□ -1.36
PDLIM2-219ENST00000616289 CAMK2N2Q96S95 79 aa6.57□□□□□ -1.36
PDLIM2-219ENST00000616289 CSDC2Q9Y534 153 aaKnown RBP6.57□□□□□ -1.36
PDLIM2-219ENST00000616289 TRAV13-1A0A0B4J241 112 aa6.56□□□□□ -1.36
PDLIM2-219ENST00000616289 VCYO14598 125 aa6.56□□□□□ -1.36
PDLIM2-219ENST00000616289 SUMO2P61956 95 aaKnown RBP6.56□□□□□ -1.36
PDLIM2-219ENST00000616289 RPL18AQ02543 176 aaKnown RBP6.56□□□□□ -1.36
PDLIM2-219ENST00000616289 C9orf116Q5BN46 136 aaPredicted RBP6.56□□□□□ -1.36
PDLIM2-219ENST00000616289 EIF5A2Q9GZV4 153 aaKnown RBP6.56□□□□□ -1.36
PDLIM2-219ENST00000616289 OSTCQ9NRP0 149 aa6.56□□□□□ -1.36
PDLIM2-219ENST00000616289 PSORS1C2Q9UIG4 136 aa6.56□□□□□ -1.36
PDLIM2-219ENST00000616289 V9GYV3 84 aa6.56□□□□□ -1.36
PDLIM2-219ENST00000616289 ZNF727A8MUV8 499 aa6.55□□□□□ -1.36
PDLIM2-219ENST00000616289 C5orf38Q86SI9 138 aa6.55□□□□□ -1.36
PDLIM2-219ENST00000616289 C2orf48Q96LS8 159 aa6.55□□□□□ -1.36
PDLIM2-219ENST00000616289 KIR2DL4Q99706 377 aa6.55□□□□□ -1.36
PDLIM2-219ENST00000616289 SRP19P09132 144 aaKnown RBP6.54□□□□□ -1.36
PDLIM2-219ENST00000616289 SPAG11BQ08648 103 aa6.54□□□□□ -1.36
PDLIM2-219ENST00000616289 SMAGPQ0VAQ4 97 aa6.54□□□□□ -1.36
PDLIM2-219ENST00000616289 RIGQ13278 110 aa6.54□□□□□ -1.36
PDLIM2-219ENST00000616289 PHF5AQ7RTV0 110 aaKnown RBP6.54□□□□□ -1.36
PDLIM2-219ENST00000616289 OPRPNQ99935 248 aaPredicted RBP6.54□□□□□ -1.36
PDLIM2-219ENST00000616289 PPP1R2P9O14990 202 aa6.53□□□□□ -1.36
PDLIM2-219ENST00000616289 PPP1R17O96001 155 aa6.53□□□□□ -1.36
PDLIM2-219ENST00000616289 MT-ND6P03923 174 aa6.53□□□□□ -1.36
PDLIM2-219ENST00000616289 MRPL51Q4U2R6 128 aaKnown RBP6.53□□□□□ -1.36
PDLIM2-219ENST00000616289 C1orf137Q5JT78 98 aa6.53□□□□□ -1.36
PDLIM2-219ENST00000616289 TIMM21Q9BVV7 248 aa6.53□□□□□ -1.36
PDLIM2-219ENST00000616289 RPL39P62891 51 aaKnown RBP6.52□□□□□ -1.37
PDLIM2-219ENST00000616289 FAM104BQ5XKR9 115 aa6.52□□□□□ -1.37
PDLIM2-219ENST00000616289 OR10D4PQ8NGN7 298 aa6.52□□□□□ -1.37
PDLIM2-219ENST00000616289 NAT8BQ9UHF3 227 aa6.52□□□□□ -1.37
PDLIM2-219ENST00000616289 RPL23P62829 140 aaKnown RBP6.51□□□□□ -1.37
PDLIM2-219ENST00000616289 RNF151Q2KHN1 245 aa6.51□□□□□ -1.37
PDLIM2-219ENST00000616289 ORAOV1Q8WV07 137 aa6.51□□□□□ -1.37
PDLIM2-219ENST00000616289 FAM104AQ969W3 186 aa6.51□□□□□ -1.37
PDLIM2-219ENST00000616289 TMEM18Q96B42 140 aa6.51□□□□□ -1.37
PDLIM2-219ENST00000616289 MRPL35Q9NZE8 188 aaKnown RBP6.51□□□□□ -1.37
PDLIM2-219ENST00000616289 TRBV24-1A0A075B6N3 115 aa6.5□□□□□ -1.37
PDLIM2-219ENST00000616289 IGHV3OR16-9A0A0B4J2B5 98 aa6.5□□□□□ -1.37
PDLIM2-219ENST00000616289 FAM168BA1KXE4 195 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms