RNA–Protein interactions for RNA: ENST00000614240.4

SMN2-213, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-213ENST00000614240 TRBV6-5A0A0K0K1A5 114 aa11.11□□□□□ -0.63
SMN2-213ENST00000614240 TSHBP01222 138 aa11.1□□□□□ -0.63
SMN2-213ENST00000614240 ESDP10768 282 aa11.1□□□□□ -0.63
SMN2-213ENST00000614240 CD164L2Q6UWJ8 174 aa11.1□□□□□ -0.63
SMN2-213ENST00000614240 SLC51BQ86UW2 128 aa11.1□□□□□ -0.63
SMN2-213ENST00000614240 ISOC2Q96AB3 205 aa11.1□□□□□ -0.63
SMN2-213ENST00000614240 MALP21145 153 aa11.09□□□□□ -0.63
SMN2-213ENST00000614240 KRTAP10-8P60410 259 aa11.09□□□□□ -0.63
SMN2-213ENST00000614240 GAGE2BQ13066 116 aa11.09□□□□□ -0.63
SMN2-213ENST00000614240 ZNF664Q8N3J9 261 aa11.09□□□□□ -0.63
SMN2-213ENST00000614240 CDC42SE2Q9NRR3 84 aa11.09□□□□□ -0.63
SMN2-213ENST00000614240 GAS8-AS1O95177 125 aa11.08□□□□□ -0.64
SMN2-213ENST00000614240 CAMPP49913 170 aa11.08□□□□□ -0.64
SMN2-213ENST00000614240 CEBPGP53567 150 aa11.08□□□□□ -0.64
SMN2-213ENST00000614240 FAM231DQ6ZW35 169 aa11.08□□□□□ -0.64
SMN2-213ENST00000614240 MRPL52Q86TS9 123 aaKnown RBP11.08□□□□□ -0.64
SMN2-213ENST00000614240 FAM210AQ96ND0 272 aa11.08□□□□□ -0.64
SMN2-213ENST00000614240 LOC107984640A0A0U1RRK4 108 aa11.07□□□□□ -0.64
SMN2-213ENST00000614240 C7orf77A4D0Y5 90 aa11.07□□□□□ -0.64
SMN2-213ENST00000614240 PTTG1IPP53801 180 aa11.07□□□□□ -0.64
SMN2-213ENST00000614240 SRSF9Q13242 221 aaKnown RBP eCLIP11.07□□□□□ -0.64
SMN2-213ENST00000614240 IGLV4-69A0A075B6H9 119 aa11.06□□□□□ -0.64
SMN2-213ENST00000614240 TMEM250H0YL14 139 aa11.06□□□□□ -0.64
SMN2-213ENST00000614240 FCER1GP30273 86 aa11.06□□□□□ -0.64
SMN2-213ENST00000614240 A0A1B0GUT8 65 aa11.05□□□□□ -0.64
SMN2-213ENST00000614240 C1orf196B1AJZ1 125 aa11.05□□□□□ -0.64
SMN2-213ENST00000614240 COX7A2LO14548 114 aa11.05□□□□□ -0.64
SMN2-213ENST00000614240 CT83Q5H943 113 aa11.05□□□□□ -0.64
SMN2-213ENST00000614240 CAMK2N2Q96S95 79 aa11.05□□□□□ -0.64
SMN2-213ENST00000614240 TMEM191AQ9H0A3 160 aa11.05□□□□□ -0.64
SMN2-213ENST00000614240 TRBV27A0A0K0K1C4 114 aa11.04□□□□□ -0.64
SMN2-213ENST00000614240 POLR2KP53803 58 aaKnown RBP11.04□□□□□ -0.64
SMN2-213ENST00000614240 SMAGPQ0VAQ4 97 aa11.04□□□□□ -0.64
SMN2-213ENST00000614240 TCTE3Q8IZS6 198 aa11.04□□□□□ -0.64
SMN2-213ENST00000614240 HIGD1CA8MV81 97 aa11.03□□□□□ -0.64
SMN2-213ENST00000614240 VCYO14598 125 aa11.03□□□□□ -0.64
SMN2-213ENST00000614240 RAB4AP20338 218 aa11.03□□□□□ -0.64
SMN2-213ENST00000614240 BLOC1S1P78537 153 aa11.03□□□□□ -0.64
SMN2-213ENST00000614240 TSKUQ8WUA8 353 aa11.03□□□□□ -0.64
SMN2-213ENST00000614240 TRAV13-1A0A0B4J241 112 aa11.02□□□□□ -0.65
SMN2-213ENST00000614240 MT-ND6P03923 174 aa11.02□□□□□ -0.65
SMN2-213ENST00000614240 AMN1Q8IY45 258 aa11.02□□□□□ -0.65
SMN2-213ENST00000614240 A0A1W2PNN7 141 aa11.01□□□□□ -0.65
SMN2-213ENST00000614240 APOMO95445 188 aa11.01□□□□□ -0.65
SMN2-213ENST00000614240 RPL18AQ02543 176 aaKnown RBP11.01□□□□□ -0.65
SMN2-213ENST00000614240 RNASE13Q5GAN3 156 aaKnown RBP11.01□□□□□ -0.65
SMN2-213ENST00000614240 NUP35Q8NFH5 326 aa11.01□□□□□ -0.65
SMN2-213ENST00000614240 SMKR1H3BMG3 65 aa11□□□□□ -0.65
SMN2-213ENST00000614240 PPP1R17O96001 155 aa11□□□□□ -0.65
SMN2-213ENST00000614240 KIR2DL4Q99706 377 aa11□□□□□ -0.65
SMN2-213ENST00000614240 SMIM7Q9BQ49 75 aa11□□□□□ -0.65
SMN2-213ENST00000614240 RIGQ13278 110 aa10.99□□□□□ -0.65
SMN2-213ENST00000614240 C9orf116Q5BN46 136 aaPredicted RBP10.99□□□□□ -0.65
SMN2-213ENST00000614240 ALKAL2Q6UX46 152 aa10.99□□□□□ -0.65
SMN2-213ENST00000614240 C5orf38Q86SI9 138 aa10.99□□□□□ -0.65
SMN2-213ENST00000614240 EIF5A2Q9GZV4 153 aaKnown RBP10.99□□□□□ -0.65
SMN2-213ENST00000614240 CSDC2Q9Y534 153 aaKnown RBP10.99□□□□□ -0.65
SMN2-213ENST00000614240 LINC01551Q86U37 167 aa10.98□□□□□ -0.65
SMN2-213ENST00000614240 C2orf48Q96LS8 159 aa10.98□□□□□ -0.65
SMN2-213ENST00000614240 PSORS1C2Q9UIG4 136 aa10.98□□□□□ -0.65
SMN2-213ENST00000614240 UBE2D4Q9Y2X8 147 aa10.98□□□□□ -0.65
SMN2-213ENST00000614240 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.97□□□□□ -0.65
SMN2-213ENST00000614240 SUMO2P61956 95 aaKnown RBP10.97□□□□□ -0.65
SMN2-213ENST00000614240 SPAG11BQ08648 103 aa10.97□□□□□ -0.65
SMN2-213ENST00000614240 C1orf137Q5JT78 98 aa10.97□□□□□ -0.65
SMN2-213ENST00000614240 TMEM18Q96B42 140 aa10.97□□□□□ -0.65
SMN2-213ENST00000614240 OPRPNQ99935 248 aaPredicted RBP10.97□□□□□ -0.65
SMN2-213ENST00000614240 OSTCQ9NRP0 149 aa10.97□□□□□ -0.65
SMN2-213ENST00000614240 ZNF727A8MUV8 499 aa10.96□□□□□ -0.65
SMN2-213ENST00000614240 LCE2DQ5TA82 110 aaPredicted RBP10.95□□□□□ -0.66
SMN2-213ENST00000614240 Q6ZUT4 128 aa10.95□□□□□ -0.66
SMN2-213ENST00000614240 PHF5AQ7RTV0 110 aaKnown RBP10.95□□□□□ -0.66
SMN2-213ENST00000614240 PPP1R2P9O14990 202 aa10.94□□□□□ -0.66
SMN2-213ENST00000614240 NRACQ8N912 160 aa10.94□□□□□ -0.66
SMN2-213ENST00000614240 LRP2P98164 4655 aa10.93□□□□□ -0.66
SMN2-213ENST00000614240 RNF151Q2KHN1 245 aa10.93□□□□□ -0.66
SMN2-213ENST00000614240 TIMM21Q9BVV7 248 aa10.93□□□□□ -0.66
SMN2-213ENST00000614240 OR10D4PQ8NGN7 298 aa10.92□□□□□ -0.66
SMN2-213ENST00000614240 V9GYV3 84 aa10.92□□□□□ -0.66
SMN2-213ENST00000614240 A0A087WZ39 114 aa10.91□□□□□ -0.66
SMN2-213ENST00000614240 ORAOV1Q8WV07 137 aa10.91□□□□□ -0.66
SMN2-213ENST00000614240 DIRC1Q969H9 104 aa10.91□□□□□ -0.66
SMN2-213ENST00000614240 IMMP2LQ96T52 175 aa10.91□□□□□ -0.66
SMN2-213ENST00000614240 NAT8BQ9UHF3 227 aa10.91□□□□□ -0.66
SMN2-213ENST00000614240 MRPL51Q4U2R6 128 aaKnown RBP10.9□□□□□ -0.66
SMN2-213ENST00000614240 FAM104BQ5XKR9 115 aa10.9□□□□□ -0.66
SMN2-213ENST00000614240 RNF213Q63HN8 5207 aa10.9□□□□□ -0.67
SMN2-213ENST00000614240 F8WDY8 70 aa10.89□□□□□ -0.67
SMN2-213ENST00000614240 NDUFA1O15239 70 aa10.89□□□□□ -0.67
SMN2-213ENST00000614240 TCAPO15273 167 aa10.89□□□□□ -0.67
SMN2-213ENST00000614240 IGLV7-43P04211 117 aa10.89□□□□□ -0.67
SMN2-213ENST00000614240 SRP19P09132 144 aaKnown RBP10.89□□□□□ -0.67
SMN2-213ENST00000614240 CKS2P33552 79 aa10.89□□□□□ -0.67
SMN2-213ENST00000614240 AKAP14Q86UN6 197 aa10.89□□□□□ -0.67
SMN2-213ENST00000614240 C20orf78Q9BR46 151 aa10.89□□□□□ -0.67
SMN2-213ENST00000614240 MRPL35Q9NZE8 188 aaKnown RBP10.89□□□□□ -0.67
SMN2-213ENST00000614240 LINC00862A6NCI5 91 aa10.88□□□□□ -0.67
SMN2-213ENST00000614240 RPL39P62891 51 aaKnown RBP10.88□□□□□ -0.67
SMN2-213ENST00000614240 TMEM241Q24JQ0 296 aa10.88□□□□□ -0.67
SMN2-213ENST00000614240 PRR26Q8N8Z3 221 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms