RNA–Protein interactions for RNA: ENST00000610756.4

TCF3-219, Transcript of transcription factor 3, humanhuman

TSL 1 (best)

Gene TCF3, Length 1,343 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-219ENST00000610756 KIR2DL4Q99706 377 aa12.47□□□□□ -0.41
TCF3-219ENST00000610756 hDV102S1A0JD36 115 aa12.46□□□□□ -0.41
TCF3-219ENST00000610756 C7orf77A4D0Y5 90 aa12.46□□□□□ -0.41
TCF3-219ENST00000610756 FCER1GP30273 86 aa12.46□□□□□ -0.41
TCF3-219ENST00000610756 MRPL54Q6P161 138 aaKnown RBP12.46□□□□□ -0.41
TCF3-219ENST00000610756 CFAP161Q6P656 301 aa12.46□□□□□ -0.41
TCF3-219ENST00000610756 CHCHD10Q8WYQ3 142 aaPredicted RBP12.46□□□□□ -0.41
TCF3-219ENST00000610756 CDC42SE2Q9NRR3 84 aa12.46□□□□□ -0.41
TCF3-219ENST00000610756 RPL32P62910 135 aaKnown RBP12.45□□□□□ -0.42
TCF3-219ENST00000610756 CIRBP-AS1Q8TBR5 109 aa12.45□□□□□ -0.42
TCF3-219ENST00000610756 SDIM1Q6ZPB5 146 aa12.44□□□□□ -0.42
TCF3-219ENST00000610756 ATP5L2Q7Z4Y8 100 aa12.44□□□□□ -0.42
TCF3-219ENST00000610756 ZNF664Q8N3J9 261 aa12.44□□□□□ -0.42
TCF3-219ENST00000610756 ANAPC16Q96DE5 110 aa12.44□□□□□ -0.42
TCF3-219ENST00000610756 AP5S1Q9NUS5 200 aa12.44□□□□□ -0.42
TCF3-219ENST00000610756 CSDC2Q9Y534 153 aaKnown RBP12.44□□□□□ -0.42
TCF3-219ENST00000610756 LINC00959A0A1B0GUT2 108 aa12.43□□□□□ -0.42
TCF3-219ENST00000610756 TNFRSF6BO95407 300 aa12.43□□□□□ -0.42
TCF3-219ENST00000610756 MT-ND4LP03901 98 aa12.43□□□□□ -0.42
TCF3-219ENST00000610756 SLPIP03973 132 aa12.43□□□□□ -0.42
TCF3-219ENST00000610756 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.42□□□□□ -0.42
TCF3-219ENST00000610756 PPBPP02775 128 aa12.42□□□□□ -0.42
TCF3-219ENST00000610756 SMAGPQ0VAQ4 97 aa12.42□□□□□ -0.42
TCF3-219ENST00000610756 LINC00528Q8N1L1 170 aa12.42□□□□□ -0.42
TCF3-219ENST00000610756 C15orf56Q8N910 161 aa12.42□□□□□ -0.42
TCF3-219ENST00000610756 D6R8Y8 96 aa12.41□□□□□ -0.42
TCF3-219ENST00000610756 TCAPO15273 167 aa12.41□□□□□ -0.42
TCF3-219ENST00000610756 PLA2G1BP04054 148 aaKnown RBP12.41□□□□□ -0.42
TCF3-219ENST00000610756 FOXI1Q12951 378 aa12.41□□□□□ -0.42
TCF3-219ENST00000610756 PHOX2AO14813 284 aa12.4□□□□□ -0.42
TCF3-219ENST00000610756 IFITM2Q01629 132 aa12.4□□□□□ -0.42
TCF3-219ENST00000610756 UBE2D4Q9Y2X8 147 aa12.4□□□□□ -0.42
TCF3-219ENST00000610756 XCL1P47992 114 aa12.39□□□□□ -0.43
TCF3-219ENST00000610756 SS18Q15532 418 aa12.39□□□□□ -0.43
TCF3-219ENST00000610756 TMEM18Q96B42 140 aa12.39□□□□□ -0.43
TCF3-219ENST00000610756 CCL25O15444 150 aa12.38□□□□□ -0.43
TCF3-219ENST00000610756 UQCC3Q6UW78 93 aa12.38□□□□□ -0.43
TCF3-219ENST00000610756 TIMM21Q9BVV7 248 aa12.38□□□□□ -0.43
TCF3-219ENST00000610756 IGHV3-64A0A075B6Q5 118 aa12.37□□□□□ -0.43
TCF3-219ENST00000610756 NPYP01303 97 aa12.37□□□□□ -0.43
TCF3-219ENST00000610756 CD164L2Q6UWJ8 174 aa12.37□□□□□ -0.43
TCF3-219ENST00000610756 TMEM136Q6ZRR5 245 aa12.37□□□□□ -0.43
TCF3-219ENST00000610756 ORMDL3Q8N138 153 aa12.37□□□□□ -0.43
TCF3-219ENST00000610756 SMIM2Q9BVW6 85 aa12.37□□□□□ -0.43
TCF3-219ENST00000610756 GVQW2A0A096LPI5 108 aaPredicted RBP12.37□□□□□ -0.43
TCF3-219ENST00000610756 C1orf196B1AJZ1 125 aa12.37□□□□□ -0.43
TCF3-219ENST00000610756 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.37□□□□□ -0.43
TCF3-219ENST00000610756 MYCBP2O75592 4640 aa12.36□□□□□ -0.43
TCF3-219ENST00000610756 CIRBPQ14011 172 aaKnown RBP12.36□□□□□ -0.43
TCF3-219ENST00000610756 TMEM218A2RU14 115 aa12.35□□□□□ -0.43
TCF3-219ENST00000610756 PRSS47A8MTI9 375 aa12.35□□□□□ -0.43
TCF3-219ENST00000610756 PANO1I0J062 215 aa12.35□□□□□ -0.43
TCF3-219ENST00000610756 HIGD2BQ4VC39 106 aa12.35□□□□□ -0.43
TCF3-219ENST00000610756 PRELID3AQ96N28 172 aa12.35□□□□□ -0.43
TCF3-219ENST00000610756 IGHV1-58A0A0C4DH39 117 aa12.34□□□□□ -0.43
TCF3-219ENST00000610756 IMMP2LQ96T52 175 aa12.34□□□□□ -0.43
TCF3-219ENST00000610756 LAMTOR2Q9Y2Q5 125 aa12.33□□□□□ -0.44
TCF3-219ENST00000610756 FLG2Q5D862 2391 aaPredicted RBP12.32□□□□□ -0.44
TCF3-219ENST00000610756 ADCYAP1P18509 176 aa12.32□□□□□ -0.44
TCF3-219ENST00000610756 KRTAP10-4P60372 401 aaPredicted RBP12.32□□□□□ -0.44
TCF3-219ENST00000610756 RPL39P62891 51 aaKnown RBP12.32□□□□□ -0.44
TCF3-219ENST00000610756 RAB5AP20339 215 aa12.31□□□□□ -0.44
TCF3-219ENST00000610756 RNASE13Q5GAN3 156 aaKnown RBP12.31□□□□□ -0.44
TCF3-219ENST00000610756 Q6ZUT4 128 aa12.31□□□□□ -0.44
TCF3-219ENST00000610756 FAM104AQ969W3 186 aa12.31□□□□□ -0.44
TCF3-219ENST00000610756 SPANXA1Q9NS26 97 aa12.31□□□□□ -0.44
TCF3-219ENST00000610756 TRAV13-1A0A0B4J241 112 aa12.3□□□□□ -0.44
TCF3-219ENST00000610756 MRPS36P82909 103 aaKnown RBP12.3□□□□□ -0.44
TCF3-219ENST00000610756 DPH3Q96FX2 82 aa12.3□□□□□ -0.44
TCF3-219ENST00000610756 CTDSP1Q9GZU7 261 aa12.3□□□□□ -0.44
TCF3-219ENST00000610756 COX6A2Q02221 97 aa12.29□□□□□ -0.44
TCF3-219ENST00000610756 SEC11CQ9BY50 192 aa12.29□□□□□ -0.44
TCF3-219ENST00000610756 COX7A2LO14548 114 aa12.28□□□□□ -0.44
TCF3-219ENST00000610756 PRSS3P2Q8NHM4 247 aa12.28□□□□□ -0.44
TCF3-219ENST00000610756 SPACA4Q8TDM5 124 aa12.28□□□□□ -0.44
TCF3-219ENST00000610756 HERC1Q15751 4861 aa12.27□□□□□ -0.44
TCF3-219ENST00000610756 ZNF561-AS1K7EIQ3 104 aa12.27□□□□□ -0.45
TCF3-219ENST00000610756 CHTF8P0CG12 524 aa12.27□□□□□ -0.45
TCF3-219ENST00000610756 MALP21145 153 aa12.27□□□□□ -0.45
TCF3-219ENST00000610756 MAP1LC3AQ9H492 121 aa12.27□□□□□ -0.45
TCF3-219ENST00000610756 PYGO1Q9Y3Y4 419 aa12.27□□□□□ -0.45
TCF3-219ENST00000610756 A0A087WYN8 130 aa12.26□□□□□ -0.45
TCF3-219ENST00000610756 LOC389332A0A1B0GUA5 103 aa12.26□□□□□ -0.45
TCF3-219ENST00000610756 LINC00526Q96FQ7 95 aa12.26□□□□□ -0.45
TCF3-219ENST00000610756 OPRPNQ99935 248 aaPredicted RBP12.26□□□□□ -0.45
TCF3-219ENST00000610756 DMBT1Q9UGM3 2413 aaPredicted RBP12.26□□□□□ -0.45
TCF3-219ENST00000610756 TRAV9-1A0A075B6T8 112 aa12.25□□□□□ -0.45
TCF3-219ENST00000610756 Q8N8P6 123 aa12.25□□□□□ -0.45
TCF3-219ENST00000610756 PLAC8Q9NZF1 115 aa12.25□□□□□ -0.45
TCF3-219ENST00000610756 IFI27P40305 119 aaPredicted RBP12.24□□□□□ -0.45
TCF3-219ENST00000610756 RPL37AP61513 92 aaKnown RBP12.24□□□□□ -0.45
TCF3-219ENST00000610756 SYCNQ0VAF6 134 aa12.24□□□□□ -0.45
TCF3-219ENST00000610756 C5orf38Q86SI9 138 aa12.24□□□□□ -0.45
TCF3-219ENST00000610756 K7EMI3 77 aa12.23□□□□□ -0.45
TCF3-219ENST00000610756 COMMD7Q86VX2 200 aa12.23□□□□□ -0.45
TCF3-219ENST00000610756 CARD19Q96LW7 228 aa12.23□□□□□ -0.45
TCF3-219ENST00000610756 PKIGQ9Y2B9 76 aa12.23□□□□□ -0.45
TCF3-219ENST00000610756 IGLV4-69A0A075B6H9 119 aa12.22□□□□□ -0.45
TCF3-219ENST00000610756 IGHV3OR16-9A0A0B4J2B5 98 aa12.22□□□□□ -0.45
TCF3-219ENST00000610756 APOMO95445 188 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 137.2 ms