RNA–Protein interactions for RNA: ENST00000604164.5

CCDC12-209, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 399 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-209ENST00000604164 D6R8Y8 96 aa7.52□□□□□ -1.21
CCDC12-209ENST00000604164 CCL25O15444 150 aa7.52□□□□□ -1.21
CCDC12-209ENST00000604164 TNFRSF6BO95407 300 aa7.52□□□□□ -1.21
CCDC12-209ENST00000604164 CNBPP62633 177 aaKnown RBP7.52□□□□□ -1.21
CCDC12-209ENST00000604164 SS18Q15532 418 aa7.52□□□□□ -1.21
CCDC12-209ENST00000604164 Q5VSD8 79 aa7.52□□□□□ -1.21
CCDC12-209ENST00000604164 ORMDL3Q8N138 153 aa7.52□□□□□ -1.21
CCDC12-209ENST00000604164 FAM30AQ9NZY2 134 aa7.52□□□□□ -1.21
CCDC12-209ENST00000604164 HSPG2P98160 4391 aa7.51□□□□□ -1.21
CCDC12-209ENST00000604164 ZNF664Q8N3J9 261 aa7.51□□□□□ -1.21
CCDC12-209ENST00000604164 C9orf163Q8N9P6 203 aa7.51□□□□□ -1.21
CCDC12-209ENST00000604164 IMMP2LQ96T52 175 aa7.51□□□□□ -1.21
CCDC12-209ENST00000604164 CHAC1Q9BUX1 264 aa7.51□□□□□ -1.21
CCDC12-209ENST00000604164 TIMM21Q9BVV7 248 aa7.51□□□□□ -1.21
CCDC12-209ENST00000604164 CDC42SE2Q9NRR3 84 aa7.51□□□□□ -1.21
CCDC12-209ENST00000604164 LAMTOR2Q9Y2Q5 125 aa7.51□□□□□ -1.21
CCDC12-209ENST00000604164 LINC00959A0A1B0GUT2 108 aa7.5□□□□□ -1.21
CCDC12-209ENST00000604164 SMR3BP02814 79 aaPredicted RBP7.5□□□□□ -1.21
CCDC12-209ENST00000604164 PLA2G1BP04054 148 aaKnown RBP7.5□□□□□ -1.21
CCDC12-209ENST00000604164 RAB5AP20339 215 aa7.5□□□□□ -1.21
CCDC12-209ENST00000604164 LINC01620Q4KN68 170 aa7.5□□□□□ -1.21
CCDC12-209ENST00000604164 SMIM2Q9BVW6 85 aa7.5□□□□□ -1.21
CCDC12-209ENST00000604164 KRTAP17-1Q9BYP8 105 aa7.5□□□□□ -1.21
CCDC12-209ENST00000604164 IGHV3-64A0A075B6Q5 118 aa7.49□□□□□ -1.21
CCDC12-209ENST00000604164 TMEM218A2RU14 115 aa7.49□□□□□ -1.21
CCDC12-209ENST00000604164 C1orf196B1AJZ1 125 aa7.49□□□□□ -1.21
CCDC12-209ENST00000604164 HAMPP81172 84 aa7.49□□□□□ -1.21
CCDC12-209ENST00000604164 IFITM2Q01629 132 aa7.49□□□□□ -1.21
CCDC12-209ENST00000604164 TMEM136Q6ZRR5 245 aa7.49□□□□□ -1.21
CCDC12-209ENST00000604164 PRELID3AQ96N28 172 aa7.49□□□□□ -1.21
CCDC12-209ENST00000604164 CTDSP1Q9GZU7 261 aa7.49□□□□□ -1.21
CCDC12-209ENST00000604164 PKIGQ9Y2B9 76 aa7.49□□□□□ -1.21
CCDC12-209ENST00000604164 UBE2D4Q9Y2X8 147 aa7.49□□□□□ -1.21
CCDC12-209ENST00000604164 TRAV9-1A0A075B6T8 112 aa7.48□□□□□ -1.21
CCDC12-209ENST00000604164 NPYP01303 97 aa7.48□□□□□ -1.21
CCDC12-209ENST00000604164 XCL1P47992 114 aa7.48□□□□□ -1.21
CCDC12-209ENST00000604164 CD164L2Q6UWJ8 174 aa7.48□□□□□ -1.21
CCDC12-209ENST00000604164 SCXQ7RTU7 201 aa7.48□□□□□ -1.21
CCDC12-209ENST00000604164 SEC11CQ9BY50 192 aa7.48□□□□□ -1.21
CCDC12-209ENST00000604164 SPANXA1Q9NS26 97 aa7.48□□□□□ -1.21
CCDC12-209ENST00000604164 DNAH5Q8TE73 4624 aa7.48□□□□□ -1.21
CCDC12-209ENST00000604164 IGHV1-58A0A0C4DH39 117 aa7.47□□□□□ -1.21
CCDC12-209ENST00000604164 INAFM2P0DMQ5 153 aa7.47□□□□□ -1.21
CCDC12-209ENST00000604164 S100PP25815 95 aa7.47□□□□□ -1.21
CCDC12-209ENST00000604164 FOXI1Q12951 378 aa7.47□□□□□ -1.21
CCDC12-209ENST00000604164 MAP1LC3AQ9H492 121 aa7.47□□□□□ -1.21
CCDC12-209ENST00000604164 PCLOQ9Y6V0 5065 aa7.47□□□□□ -1.21
CCDC12-209ENST00000604164 APOBP04114 4563 aaKnown RBP7.47□□□□□ -1.21
CCDC12-209ENST00000604164 GVQW2A0A096LPI5 108 aaPredicted RBP7.46□□□□□ -1.22
CCDC12-209ENST00000604164 PRSS47A8MTI9 375 aa7.46□□□□□ -1.22
CCDC12-209ENST00000604164 SDIM1Q6ZPB5 146 aa7.46□□□□□ -1.22
CCDC12-209ENST00000604164 COMMD7Q86VX2 200 aa7.46□□□□□ -1.22
CCDC12-209ENST00000604164 LINC00528Q8N1L1 170 aa7.46□□□□□ -1.22
CCDC12-209ENST00000604164 C15orf56Q8N910 161 aa7.46□□□□□ -1.22
CCDC12-209ENST00000604164 K7EMI3 77 aa7.45□□□□□ -1.22
CCDC12-209ENST00000604164 MALP21145 153 aa7.45□□□□□ -1.22
CCDC12-209ENST00000604164 CIRBP-AS1Q8TBR5 109 aa7.45□□□□□ -1.22
CCDC12-209ENST00000604164 TRAV13-1A0A0B4J241 112 aa7.44□□□□□ -1.22
CCDC12-209ENST00000604164 ZNF561-AS1K7EIQ3 104 aa7.44□□□□□ -1.22
CCDC12-209ENST00000604164 COX7A2LO14548 114 aa7.44□□□□□ -1.22
CCDC12-209ENST00000604164 APOMO95445 188 aa7.44□□□□□ -1.22
CCDC12-209ENST00000604164 ADCYAP1P18509 176 aa7.44□□□□□ -1.22
CCDC12-209ENST00000604164 G0S2P27469 103 aa7.44□□□□□ -1.22
CCDC12-209ENST00000604164 IFI27P40305 119 aaPredicted RBP7.44□□□□□ -1.22
CCDC12-209ENST00000604164 MRPS36P82909 103 aaKnown RBP7.44□□□□□ -1.22
CCDC12-209ENST00000604164 HIGD2BQ4VC39 106 aa7.44□□□□□ -1.22
CCDC12-209ENST00000604164 DPH3Q96FX2 82 aa7.44□□□□□ -1.22
CCDC12-209ENST00000604164 RPL39P62891 51 aaKnown RBP7.43□□□□□ -1.22
CCDC12-209ENST00000604164 COX19Q49B96 90 aa7.43□□□□□ -1.22
CCDC12-209ENST00000604164 Q6ZUT4 128 aa7.43□□□□□ -1.22
CCDC12-209ENST00000604164 NXT2Q9NPJ8 142 aaKnown RBP7.43□□□□□ -1.22
CCDC12-209ENST00000604164 PYGO1Q9Y3Y4 419 aa7.43□□□□□ -1.22
CCDC12-209ENST00000604164 LOC389332A0A1B0GUA5 103 aa7.42□□□□□ -1.22
CCDC12-209ENST00000604164 SLPIP03973 132 aa7.42□□□□□ -1.22
CCDC12-209ENST00000604164 RHEBQ15382 184 aa7.42□□□□□ -1.22
CCDC12-209ENST00000604164 ORMDL2Q53FV1 153 aa7.42□□□□□ -1.22
CCDC12-209ENST00000604164 Q8N8P6 123 aa7.42□□□□□ -1.22
CCDC12-209ENST00000604164 LINC00474Q9P2X8 69 aa7.42□□□□□ -1.22
CCDC12-209ENST00000604164 NPSP0C0P6 89 aa7.41□□□□□ -1.22
CCDC12-209ENST00000604164 CIRBPQ14011 172 aaKnown RBP7.41□□□□□ -1.22
CCDC12-209ENST00000604164 RNASE13Q5GAN3 156 aaKnown RBP7.41□□□□□ -1.22
CCDC12-209ENST00000604164 Q6ZN92 141 aa7.41□□□□□ -1.22
CCDC12-209ENST00000604164 CARD19Q96LW7 228 aa7.41□□□□□ -1.22
CCDC12-209ENST00000604164 CYSLTR1Q9Y271 337 aa7.41□□□□□ -1.22
CCDC12-209ENST00000604164 IFITM10A6NMD0 228 aa7.4□□□□□ -1.22
CCDC12-209ENST00000604164 NDUFA5Q16718 116 aa7.4□□□□□ -1.22
CCDC12-209ENST00000604164 C10orf91Q5T1B1 145 aa7.4□□□□□ -1.22
CCDC12-209ENST00000604164 TMEM141Q96I45 108 aa7.4□□□□□ -1.22
CCDC12-209ENST00000604164 C2orf88Q9BSF0 95 aa7.4□□□□□ -1.22
CCDC12-209ENST00000604164 GNB1LQ9BYB4 327 aa7.4□□□□□ -1.22
CCDC12-209ENST00000604164 CARHSP1Q9Y2V2 147 aaKnown RBP7.4□□□□□ -1.22
CCDC12-209ENST00000604164 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.4□□□□□ -1.22
CCDC12-209ENST00000604164 TGIF2-C20orf24A0A0A6YYL0 155 aa7.39□□□□□ -1.23
CCDC12-209ENST00000604164 F8WDY8 70 aa7.39□□□□□ -1.23
CCDC12-209ENST00000604164 MT-ND6P03923 174 aa7.39□□□□□ -1.23
CCDC12-209ENST00000604164 COX6A2Q02221 97 aa7.39□□□□□ -1.23
CCDC12-209ENST00000604164 SYCNQ0VAF6 134 aa7.39□□□□□ -1.23
CCDC12-209ENST00000604164 PAPPA-AS1Q5QFB9 102 aa7.39□□□□□ -1.23
CCDC12-209ENST00000604164 TEX43Q6ZNM6 134 aa7.39□□□□□ -1.23
CCDC12-209ENST00000604164 OR10D4PQ8NGN7 298 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms