RNA–Protein interactions for RNA: ENST00000601816.3

PNKP-216, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 682 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-216ENST00000601816 C7orf77A4D0Y5 90 aa16.68■□□□□ 0.26
PNKP-216ENST00000601816 VCYO14598 125 aa16.68■□□□□ 0.26
PNKP-216ENST00000601816 RPL37AP61513 92 aaKnown RBP16.67■□□□□ 0.26
PNKP-216ENST00000601816 HIGD2BQ4VC39 106 aa16.67■□□□□ 0.26
PNKP-216ENST00000601816 MRPL52Q86TS9 123 aaKnown RBP16.67■□□□□ 0.26
PNKP-216ENST00000601816 NRACQ8N912 160 aa16.67■□□□□ 0.26
PNKP-216ENST00000601816 FCER1GP30273 86 aa16.66■□□□□ 0.26
PNKP-216ENST00000601816 SUMO2P61956 95 aaKnown RBP16.66■□□□□ 0.26
PNKP-216ENST00000601816 FOXI1Q12951 378 aa16.66■□□□□ 0.26
PNKP-216ENST00000601816 LINC00959A0A1B0GUT2 108 aa16.65■□□□□ 0.26
PNKP-216ENST00000601816 XCL1P47992 114 aa16.65■□□□□ 0.26
PNKP-216ENST00000601816 CAMPP49913 170 aa16.65■□□□□ 0.26
PNKP-216ENST00000601816 CIRBPQ14011 172 aaKnown RBP16.65■□□□□ 0.26
PNKP-216ENST00000601816 FAM104BQ5XKR9 115 aa16.65■□□□□ 0.26
PNKP-216ENST00000601816 A0A1B0GW15 77 aa16.64■□□□□ 0.25
PNKP-216ENST00000601816 KRTAP29-1A8MX34 341 aaPredicted RBP16.64■□□□□ 0.25
PNKP-216ENST00000601816 CCL25O15444 150 aa16.64■□□□□ 0.25
PNKP-216ENST00000601816 MRPL51Q4U2R6 128 aaKnown RBP16.64■□□□□ 0.25
PNKP-216ENST00000601816 CDC42SE2Q9NRR3 84 aa16.64■□□□□ 0.25
PNKP-216ENST00000601816 GVQW2A0A096LPI5 108 aaPredicted RBP16.63■□□□□ 0.25
PNKP-216ENST00000601816 PPP1R2P9O14990 202 aa16.63■□□□□ 0.25
PNKP-216ENST00000601816 DPH3Q96FX2 82 aa16.63■□□□□ 0.25
PNKP-216ENST00000601816 KIR2DL4Q99706 377 aa16.63■□□□□ 0.25
PNKP-216ENST00000601816 CHTF8P0CG12 524 aa16.62■□□□□ 0.25
PNKP-216ENST00000601816 SS18Q15532 418 aa16.62■□□□□ 0.25
PNKP-216ENST00000601816 ZNF664Q8N3J9 261 aa16.62■□□□□ 0.25
PNKP-216ENST00000601816 LINC00862A6NCI5 91 aa16.6■□□□□ 0.25
PNKP-216ENST00000601816 SMAGPQ0VAQ4 97 aa16.6■□□□□ 0.25
PNKP-216ENST00000601816 SPACA4Q8TDM5 124 aa16.6■□□□□ 0.25
PNKP-216ENST00000601816 S100A8P05109 93 aa16.59■□□□□ 0.25
PNKP-216ENST00000601816 CKS2P33552 79 aa16.59■□□□□ 0.25
PNKP-216ENST00000601816 A0A087WYN8 130 aa16.58■□□□□ 0.24
PNKP-216ENST00000601816 IGHV1-58A0A0C4DH39 117 aa16.58■□□□□ 0.24
PNKP-216ENST00000601816 HBBP68871 147 aa16.58■□□□□ 0.24
PNKP-216ENST00000601816 MRPL54Q6P161 138 aaKnown RBP16.58■□□□□ 0.24
PNKP-216ENST00000601816 C20orf78Q9BR46 151 aa16.58■□□□□ 0.24
PNKP-216ENST00000601816 F8W036 122 aa16.57■□□□□ 0.24
PNKP-216ENST00000601816 COX6A2Q02221 97 aa16.57■□□□□ 0.24
PNKP-216ENST00000601816 CD164L2Q6UWJ8 174 aa16.57■□□□□ 0.24
PNKP-216ENST00000601816 UBE2D4Q9Y2X8 147 aa16.57■□□□□ 0.24
PNKP-216ENST00000601816 CSDC2Q9Y534 153 aaKnown RBP16.57■□□□□ 0.24
PNKP-216ENST00000601816 TRBV24-1A0A075B6N3 115 aa16.55■□□□□ 0.24
PNKP-216ENST00000601816 A0A1B0GXF2 115 aa16.54■□□□□ 0.24
PNKP-216ENST00000601816 TNFRSF6BO95407 300 aa16.54■□□□□ 0.24
PNKP-216ENST00000601816 RPL32P62910 135 aaKnown RBP16.54■□□□□ 0.24
PNKP-216ENST00000601816 PRSS3P2Q8NHM4 247 aa16.54■□□□□ 0.24
PNKP-216ENST00000601816 TMEM18Q96B42 140 aa16.54■□□□□ 0.24
PNKP-216ENST00000601816 TCAPO15273 167 aa16.53■□□□□ 0.24
PNKP-216ENST00000601816 PLAC8Q9NZF1 115 aa16.53■□□□□ 0.24
PNKP-216ENST00000601816 C1orf196B1AJZ1 125 aa16.52■□□□□ 0.24
PNKP-216ENST00000601816 D6R8Y8 96 aa16.52■□□□□ 0.24
PNKP-216ENST00000601816 OXTP01178 125 aa16.52■□□□□ 0.24
PNKP-216ENST00000601816 RNASE13Q5GAN3 156 aaKnown RBP16.52■□□□□ 0.24
PNKP-216ENST00000601816 PKHD1L1Q86WI1 4243 aa16.52■□□□□ 0.23
PNKP-216ENST00000601816 IGKV2-24A0A0C4DH68 120 aa16.51■□□□□ 0.23
PNKP-216ENST00000601816 HNRNPA3P51991 378 aaKnown RBP16.51■□□□□ 0.23
PNKP-216ENST00000601816 MAJINQ3KP22 176 aa16.51■□□□□ 0.23
PNKP-216ENST00000601816 LINC00526Q96FQ7 95 aa16.51■□□□□ 0.23
PNKP-216ENST00000601816 TIMM21Q9BVV7 248 aa16.51■□□□□ 0.23
PNKP-216ENST00000601816 SMIM2Q9BVW6 85 aa16.51■□□□□ 0.23
PNKP-216ENST00000601816 Q6ZUT4 128 aa16.5■□□□□ 0.23
PNKP-216ENST00000601816 CARD19Q96LW7 228 aa16.5■□□□□ 0.23
PNKP-216ENST00000601816 LRP1Q07954 4544 aaKnown RBP16.49■□□□□ 0.23
PNKP-216ENST00000601816 TRAV13-1A0A0B4J241 112 aa16.49■□□□□ 0.23
PNKP-216ENST00000601816 ZNF561-AS1K7EIQ3 104 aa16.49■□□□□ 0.23
PNKP-216ENST00000601816 PPBPP02775 128 aa16.49■□□□□ 0.23
PNKP-216ENST00000601816 RAB14P61106 215 aa16.49■□□□□ 0.23
PNKP-216ENST00000601816 ATP5L2Q7Z4Y8 100 aa16.49■□□□□ 0.23
PNKP-216ENST00000601816 PKIGQ9Y2B9 76 aa16.49■□□□□ 0.23
PNKP-216ENST00000601816 COX7A2LO14548 114 aa16.48■□□□□ 0.23
PNKP-216ENST00000601816 PHOX2AO14813 284 aa16.48■□□□□ 0.23
PNKP-216ENST00000601816 NPYP01303 97 aa16.48■□□□□ 0.23
PNKP-216ENST00000601816 MALP21145 153 aa16.48■□□□□ 0.23
PNKP-216ENST00000601816 FAT3Q8TDW7 4589 aa16.46■□□□□ 0.23
PNKP-216ENST00000601816 A0A096LNI7 61 aa16.46■□□□□ 0.23
PNKP-216ENST00000601816 SYCNQ0VAF6 134 aa16.46■□□□□ 0.23
PNKP-216ENST00000601816 PNRC1Q12796 327 aaPredicted RBP16.46■□□□□ 0.23
PNKP-216ENST00000601816 RPL39P62891 51 aaKnown RBP16.45■□□□□ 0.22
PNKP-216ENST00000601816 ORMDL3Q8N138 153 aa16.45■□□□□ 0.22
PNKP-216ENST00000601816 STPG4Q8N801 248 aa16.45■□□□□ 0.22
PNKP-216ENST00000601816 C7orf33Q8WU49 177 aa16.45■□□□□ 0.22
PNKP-216ENST00000601816 SPANXA1Q9NS26 97 aa16.44■□□□□ 0.22
PNKP-216ENST00000601816 LINC00474Q9P2X8 69 aa16.44■□□□□ 0.22
PNKP-216ENST00000601816 IGLV4-69A0A075B6H9 119 aa16.42■□□□□ 0.22
PNKP-216ENST00000601816 MT-ND4LP03901 98 aa16.42■□□□□ 0.22
PNKP-216ENST00000601816 TMEM136Q6ZRR5 245 aa16.42■□□□□ 0.22
PNKP-216ENST00000601816 PRELID3AQ96N28 172 aa16.42■□□□□ 0.22
PNKP-216ENST00000601816 C5orf38Q86SI9 138 aa16.41■□□□□ 0.22
PNKP-216ENST00000601816 ANAPC16Q96DE5 110 aa16.41■□□□□ 0.22
PNKP-216ENST00000601816 APOMO95445 188 aa16.39■□□□□ 0.21
PNKP-216ENST00000601816 RAB5AP20339 215 aa16.39■□□□□ 0.21
PNKP-216ENST00000601816 MRPS36P82909 103 aaKnown RBP16.39■□□□□ 0.21
PNKP-216ENST00000601816 Q6ZRU5 148 aa16.38■□□□□ 0.21
PNKP-216ENST00000601816 FAM104AQ969W3 186 aa16.38■□□□□ 0.21
PNKP-216ENST00000601816 CAMK2N2Q96S95 79 aa16.37■□□□□ 0.21
PNKP-216ENST00000601816 OPRPNQ99935 248 aaPredicted RBP16.37■□□□□ 0.21
PNKP-216ENST00000601816 C2orf48Q96LS8 159 aa16.36■□□□□ 0.21
PNKP-216ENST00000601816 LAMTOR2Q9Y2Q5 125 aa16.36■□□□□ 0.21
PNKP-216ENST00000601816 LOC107984640A0A0U1RRK4 108 aa16.35■□□□□ 0.21
PNKP-216ENST00000601816 IFITM10A6NMD0 228 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms