RNA–Protein interactions for RNA: ENST00000601220.5

CHMP2A-208, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-208ENST00000601220 RNF213Q63HN8 5207 aa11.18□□□□□ -0.62
CHMP2A-208ENST00000601220 MRPL52Q86TS9 123 aaKnown RBP11.18□□□□□ -0.62
CHMP2A-208ENST00000601220 TMEM101Q96IK0 257 aa11.18□□□□□ -0.62
CHMP2A-208ENST00000601220 FAM210AQ96ND0 272 aa11.18□□□□□ -0.62
CHMP2A-208ENST00000601220 ST20Q9HBF5 79 aa11.18□□□□□ -0.62
CHMP2A-208ENST00000601220 LINC00474Q9P2X8 69 aa11.18□□□□□ -0.62
CHMP2A-208ENST00000601220 A0A0J9YXV3 536 aa11.17□□□□□ -0.62
CHMP2A-208ENST00000601220 CD164L2Q6UWJ8 174 aa11.17□□□□□ -0.62
CHMP2A-208ENST00000601220 BTF3L4Q96K17 158 aa11.17□□□□□ -0.62
CHMP2A-208ENST00000601220 TRBV27A0A0K0K1C4 114 aa11.16□□□□□ -0.62
CHMP2A-208ENST00000601220 RAB4AP20338 218 aa11.16□□□□□ -0.62
CHMP2A-208ENST00000601220 SPINK6Q6UWN8 80 aa11.16□□□□□ -0.62
CHMP2A-208ENST00000601220 MRAP2Q96G30 205 aa11.16□□□□□ -0.62
CHMP2A-208ENST00000601220 CARD19Q96LW7 228 aa11.16□□□□□ -0.62
CHMP2A-208ENST00000601220 TMEM191AQ9H0A3 160 aa11.16□□□□□ -0.62
CHMP2A-208ENST00000601220 ZNF664Q8N3J9 261 aa11.15□□□□□ -0.62
CHMP2A-208ENST00000601220 A0A1B0GUT8 65 aa11.14□□□□□ -0.63
CHMP2A-208ENST00000601220 HIGD1CA8MV81 97 aa11.14□□□□□ -0.63
CHMP2A-208ENST00000601220 SYCNQ0VAF6 134 aa11.14□□□□□ -0.63
CHMP2A-208ENST00000601220 SS18Q15532 418 aa11.14□□□□□ -0.63
CHMP2A-208ENST00000601220 TSKUQ8WUA8 353 aa11.14□□□□□ -0.63
CHMP2A-208ENST00000601220 BLOC1S1P78537 153 aa11.13□□□□□ -0.63
CHMP2A-208ENST00000601220 LINC01551Q86U37 167 aa11.13□□□□□ -0.63
CHMP2A-208ENST00000601220 PKIGQ9Y2B9 76 aa11.13□□□□□ -0.63
CHMP2A-208ENST00000601220 ZNF561-AS1K7EIQ3 104 aa11.12□□□□□ -0.63
CHMP2A-208ENST00000601220 PTTG1IPP53801 180 aa11.12□□□□□ -0.63
CHMP2A-208ENST00000601220 ALKAL2Q6UX46 152 aa11.12□□□□□ -0.63
CHMP2A-208ENST00000601220 Q6ZRP5 223 aa11.12□□□□□ -0.63
CHMP2A-208ENST00000601220 AMN1Q8IY45 258 aa11.12□□□□□ -0.63
CHMP2A-208ENST00000601220 IGLV4-69A0A075B6H9 119 aa11.11□□□□□ -0.63
CHMP2A-208ENST00000601220 C7orf77A4D0Y5 90 aa11.11□□□□□ -0.63
CHMP2A-208ENST00000601220 CAMPP49913 170 aa11.11□□□□□ -0.63
CHMP2A-208ENST00000601220 BORCS7Q96B45 105 aa11.11□□□□□ -0.63
CHMP2A-208ENST00000601220 OSTCQ9NRP0 149 aa11.11□□□□□ -0.63
CHMP2A-208ENST00000601220 A0A1W2PNN7 141 aa11.1□□□□□ -0.63
CHMP2A-208ENST00000601220 SMKR1H3BMG3 65 aa11.1□□□□□ -0.63
CHMP2A-208ENST00000601220 CEBPGP53567 150 aa11.1□□□□□ -0.63
CHMP2A-208ENST00000601220 REG3GQ6UW15 175 aa11.1□□□□□ -0.63
CHMP2A-208ENST00000601220 NRACQ8N912 160 aa11.1□□□□□ -0.63
CHMP2A-208ENST00000601220 NUP35Q8NFH5 326 aa11.1□□□□□ -0.63
CHMP2A-208ENST00000601220 UBE2D4Q9Y2X8 147 aa11.1□□□□□ -0.63
CHMP2A-208ENST00000601220 CSDC2Q9Y534 153 aaKnown RBP11.1□□□□□ -0.63
CHMP2A-208ENST00000601220 VCYO14598 125 aa11.09□□□□□ -0.63
CHMP2A-208ENST00000601220 SMIM7Q9BQ49 75 aa11.09□□□□□ -0.63
CHMP2A-208ENST00000601220 LOC107984640A0A0U1RRK4 108 aa11.08□□□□□ -0.64
CHMP2A-208ENST00000601220 C1orf196B1AJZ1 125 aa11.08□□□□□ -0.64
CHMP2A-208ENST00000601220 GAGE2BQ13066 116 aa11.08□□□□□ -0.64
CHMP2A-208ENST00000601220 V9GYV3 84 aa11.08□□□□□ -0.64
CHMP2A-208ENST00000601220 COX7A2LO14548 114 aa11.07□□□□□ -0.64
CHMP2A-208ENST00000601220 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.06□□□□□ -0.64
CHMP2A-208ENST00000601220 SRP19P09132 144 aaKnown RBP11.06□□□□□ -0.64
CHMP2A-208ENST00000601220 SUMO2P61956 95 aaKnown RBP11.06□□□□□ -0.64
CHMP2A-208ENST00000601220 RNASE13Q5GAN3 156 aaKnown RBP11.06□□□□□ -0.64
CHMP2A-208ENST00000601220 ISOC2Q96AB3 205 aa11.06□□□□□ -0.64
CHMP2A-208ENST00000601220 ZNF727A8MUV8 499 aa11.05□□□□□ -0.64
CHMP2A-208ENST00000601220 MALP21145 153 aa11.05□□□□□ -0.64
CHMP2A-208ENST00000601220 FCER1GP30273 86 aa11.05□□□□□ -0.64
CHMP2A-208ENST00000601220 FAM104AQ969W3 186 aa11.05□□□□□ -0.64
CHMP2A-208ENST00000601220 C2orf48Q96LS8 159 aa11.05□□□□□ -0.64
CHMP2A-208ENST00000601220 EIF5A2Q9GZV4 153 aaKnown RBP11.05□□□□□ -0.64
CHMP2A-208ENST00000601220 TRAV13-1A0A0B4J241 112 aa11.04□□□□□ -0.64
CHMP2A-208ENST00000601220 APOMO95445 188 aa11.04□□□□□ -0.64
CHMP2A-208ENST00000601220 PPP1R17O96001 155 aa11.04□□□□□ -0.64
CHMP2A-208ENST00000601220 RIGQ13278 110 aa11.04□□□□□ -0.64
CHMP2A-208ENST00000601220 MRPL51Q4U2R6 128 aaKnown RBP11.03□□□□□ -0.64
CHMP2A-208ENST00000601220 C9orf116Q5BN46 136 aaPredicted RBP11.03□□□□□ -0.64
CHMP2A-208ENST00000601220 Q6ZUT4 128 aa11.03□□□□□ -0.64
CHMP2A-208ENST00000601220 C5orf38Q86SI9 138 aa11.03□□□□□ -0.64
CHMP2A-208ENST00000601220 AKAP14Q86UN6 197 aa11.03□□□□□ -0.64
CHMP2A-208ENST00000601220 CAMK2N2Q96S95 79 aa11.03□□□□□ -0.64
CHMP2A-208ENST00000601220 TIMM21Q9BVV7 248 aa11.03□□□□□ -0.64
CHMP2A-208ENST00000601220 PSORS1C2Q9UIG4 136 aa11.03□□□□□ -0.64
CHMP2A-208ENST00000601220 FAM104BQ5XKR9 115 aa11.02□□□□□ -0.65
CHMP2A-208ENST00000601220 KIR2DL4Q99706 377 aa11.02□□□□□ -0.65
CHMP2A-208ENST00000601220 RNF151Q2KHN1 245 aa11.01□□□□□ -0.65
CHMP2A-208ENST00000601220 OPRPNQ99935 248 aaPredicted RBP11.01□□□□□ -0.65
CHMP2A-208ENST00000601220 TRBV24-1A0A075B6N3 115 aa11□□□□□ -0.65
CHMP2A-208ENST00000601220 PPP1R2P9O14990 202 aa11□□□□□ -0.65
CHMP2A-208ENST00000601220 RPL32P62910 135 aaKnown RBP11□□□□□ -0.65
CHMP2A-208ENST00000601220 SMAGPQ0VAQ4 97 aa11□□□□□ -0.65
CHMP2A-208ENST00000601220 NAT8BQ9UHF3 227 aa11□□□□□ -0.65
CHMP2A-208ENST00000601220 RPL23P62829 140 aaKnown RBP10.99□□□□□ -0.65
CHMP2A-208ENST00000601220 FAM74A3Q4VXF1 159 aa10.99□□□□□ -0.65
CHMP2A-208ENST00000601220 PHF5AQ7RTV0 110 aaKnown RBP10.99□□□□□ -0.65
CHMP2A-208ENST00000601220 C20orf78Q9BR46 151 aa10.99□□□□□ -0.65
CHMP2A-208ENST00000601220 LPAP08519 4548 aa10.98□□□□□ -0.65
CHMP2A-208ENST00000601220 IGHV3OR16-9A0A0B4J2B5 98 aa10.98□□□□□ -0.65
CHMP2A-208ENST00000601220 SMIM27A0A1W2PRY6 76 aa10.98□□□□□ -0.65
CHMP2A-208ENST00000601220 LINC00862A6NCI5 91 aa10.98□□□□□ -0.65
CHMP2A-208ENST00000601220 RPL39P62891 51 aaKnown RBP10.98□□□□□ -0.65
CHMP2A-208ENST00000601220 SPAG11BQ08648 103 aa10.98□□□□□ -0.65
CHMP2A-208ENST00000601220 TMEM241Q24JQ0 296 aa10.98□□□□□ -0.65
CHMP2A-208ENST00000601220 C9JQL5 133 aa10.97□□□□□ -0.65
CHMP2A-208ENST00000601220 RPL18AQ02543 176 aaKnown RBP10.97□□□□□ -0.65
CHMP2A-208ENST00000601220 OR10D4PQ8NGN7 298 aa10.97□□□□□ -0.65
CHMP2A-208ENST00000601220 TMEM18Q96B42 140 aa10.97□□□□□ -0.65
CHMP2A-208ENST00000601220 MRPL35Q9NZE8 188 aaKnown RBP10.97□□□□□ -0.65
CHMP2A-208ENST00000601220 MT-ND6P03923 174 aa10.96□□□□□ -0.65
CHMP2A-208ENST00000601220 KRTAP11-1Q8IUC1 163 aa10.96□□□□□ -0.65
CHMP2A-208ENST00000601220 TNFRSF6BO95407 300 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms