RNA–Protein interactions for RNA: ENST00000600628.2

SSBP4-208, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-208ENST00000600628 C7orf77A4D0Y5 90 aa5.7□□□□□ -1.5
SSBP4-208ENST00000600628 USP17L23D6RBM5 183 aa5.7□□□□□ -1.5
SSBP4-208ENST00000600628 VCYO14598 125 aa5.7□□□□□ -1.5
SSBP4-208ENST00000600628 RAB5BP61020 215 aa5.7□□□□□ -1.5
SSBP4-208ENST00000600628 MRPL54Q6P161 138 aaKnown RBP5.7□□□□□ -1.5
SSBP4-208ENST00000600628 CBLN2Q8IUK8 224 aa5.7□□□□□ -1.5
SSBP4-208ENST00000600628 IMMP2LQ96T52 175 aa5.7□□□□□ -1.5
SSBP4-208ENST00000600628 RPS10P5Q9NQ39 176 aa5.7□□□□□ -1.5
SSBP4-208ENST00000600628 CDC42SE2Q9NRR3 84 aa5.7□□□□□ -1.5
SSBP4-208ENST00000600628 TMEM242Q9NWH2 141 aa5.7□□□□□ -1.5
SSBP4-208ENST00000600628 C1orf196B1AJZ1 125 aa5.69□□□□□ -1.5
SSBP4-208ENST00000600628 TNFRSF6BO95407 300 aa5.69□□□□□ -1.5
SSBP4-208ENST00000600628 PPBPP02775 128 aa5.69□□□□□ -1.5
SSBP4-208ENST00000600628 SMR3BP02814 79 aaPredicted RBP5.69□□□□□ -1.5
SSBP4-208ENST00000600628 SLPIP03973 132 aa5.69□□□□□ -1.5
SSBP4-208ENST00000600628 S100A8P05109 93 aa5.69□□□□□ -1.5
SSBP4-208ENST00000600628 PMCHP20382 165 aa5.69□□□□□ -1.5
SSBP4-208ENST00000600628 CAMPP49913 170 aa5.69□□□□□ -1.5
SSBP4-208ENST00000600628 CNBPP62633 177 aaKnown RBP5.69□□□□□ -1.5
SSBP4-208ENST00000600628 HAMPP81172 84 aa5.69□□□□□ -1.5
SSBP4-208ENST00000600628 C14orf177Q52M58 125 aa5.69□□□□□ -1.5
SSBP4-208ENST00000600628 DGAT2L7PQ6IED9 249 aa5.69□□□□□ -1.5
SSBP4-208ENST00000600628 CLPSL2Q6UWE3 100 aa5.69□□□□□ -1.5
SSBP4-208ENST00000600628 C9orf163Q8N9P6 203 aa5.69□□□□□ -1.5
SSBP4-208ENST00000600628 OR5A1Q8NGJ0 315 aa5.69□□□□□ -1.5
SSBP4-208ENST00000600628 TIMM21Q9BVV7 248 aa5.69□□□□□ -1.5
SSBP4-208ENST00000600628 IGLV10-54A0A075B6I4 117 aa5.68□□□□□ -1.5
SSBP4-208ENST00000600628 COLCA2A8K830 154 aa5.68□□□□□ -1.5
SSBP4-208ENST00000600628 D6R8Y8 96 aa5.68□□□□□ -1.5
SSBP4-208ENST00000600628 UBE2L6O14933 153 aa5.68□□□□□ -1.5
SSBP4-208ENST00000600628 NPYP01303 97 aa5.68□□□□□ -1.5
SSBP4-208ENST00000600628 C15orf56Q8N910 161 aa5.68□□□□□ -1.5
SSBP4-208ENST00000600628 SMIM2Q9BVW6 85 aa5.68□□□□□ -1.5
SSBP4-208ENST00000600628 UBE2D4Q9Y2X8 147 aa5.68□□□□□ -1.5
SSBP4-208ENST00000600628 TRAV9-1A0A075B6T8 112 aa5.67□□□□□ -1.5
SSBP4-208ENST00000600628 LINC00959A0A1B0GUT2 108 aa5.67□□□□□ -1.5
SSBP4-208ENST00000600628 TCAPO15273 167 aa5.67□□□□□ -1.5
SSBP4-208ENST00000600628 HLA-DQA1P01909 254 aa5.67□□□□□ -1.5
SSBP4-208ENST00000600628 CKS2P33552 79 aa5.67□□□□□ -1.5
SSBP4-208ENST00000600628 FOXI1Q12951 378 aa5.67□□□□□ -1.5
SSBP4-208ENST00000600628 CIRBPQ14011 172 aaKnown RBP5.67□□□□□ -1.5
SSBP4-208ENST00000600628 LINC01620Q4KN68 170 aa5.67□□□□□ -1.5
SSBP4-208ENST00000600628 Q5VSD8 79 aa5.67□□□□□ -1.5
SSBP4-208ENST00000600628 ZNF664Q8N3J9 261 aa5.67□□□□□ -1.5
SSBP4-208ENST00000600628 BTF3L4Q96K17 158 aa5.67□□□□□ -1.5
SSBP4-208ENST00000600628 CTDSP1Q9GZU7 261 aa5.67□□□□□ -1.5
SSBP4-208ENST00000600628 LAMTOR2Q9Y2Q5 125 aa5.67□□□□□ -1.5
SSBP4-208ENST00000600628 FAT3Q8TDW7 4589 aa5.66□□□□□ -1.5
SSBP4-208ENST00000600628 LRP1Q07954 4544 aaKnown RBP5.66□□□□□ -1.5
SSBP4-208ENST00000600628 FAM229AH3BQW9 127 aa5.66□□□□□ -1.5
SSBP4-208ENST00000600628 S100A6P06703 90 aa5.66□□□□□ -1.5
SSBP4-208ENST00000600628 RAB5AP20339 215 aa5.66□□□□□ -1.5
SSBP4-208ENST00000600628 KRTAP10-4P60372 401 aaPredicted RBP5.66□□□□□ -1.5
SSBP4-208ENST00000600628 AMMECR1LQ6DCA0 310 aa5.66□□□□□ -1.5
SSBP4-208ENST00000600628 SDIM1Q6ZPB5 146 aa5.66□□□□□ -1.5
SSBP4-208ENST00000600628 ORMDL3Q8N138 153 aa5.66□□□□□ -1.5
SSBP4-208ENST00000600628 CHCHD10Q8WYQ3 142 aaPredicted RBP5.66□□□□□ -1.5
SSBP4-208ENST00000600628 KIR2DL4Q99706 377 aa5.66□□□□□ -1.5
SSBP4-208ENST00000600628 HERC1Q15751 4861 aa5.66□□□□□ -1.5
SSBP4-208ENST00000600628 FLG2Q5D862 2391 aaPredicted RBP5.65□□□□□ -1.5
SSBP4-208ENST00000600628 GVQW2A0A096LPI5 108 aaPredicted RBP5.65□□□□□ -1.5
SSBP4-208ENST00000600628 CCL25O15444 150 aa5.65□□□□□ -1.5
SSBP4-208ENST00000600628 INAFM2P0DMQ5 153 aa5.65□□□□□ -1.5
SSBP4-208ENST00000600628 MRPS36P82909 103 aaKnown RBP5.65□□□□□ -1.5
SSBP4-208ENST00000600628 RNASEKQ6P5S7 137 aaKnown RBP5.65□□□□□ -1.5
SSBP4-208ENST00000600628 TMEM136Q6ZRR5 245 aa5.65□□□□□ -1.5
SSBP4-208ENST00000600628 PRELID3AQ96N28 172 aa5.65□□□□□ -1.5
SSBP4-208ENST00000600628 CHAC1Q9BUX1 264 aa5.65□□□□□ -1.5
SSBP4-208ENST00000600628 GAGE12HA6NDE8 117 aa5.64□□□□□ -1.51
SSBP4-208ENST00000600628 RPL39P62891 51 aaKnown RBP5.64□□□□□ -1.51
SSBP4-208ENST00000600628 CD164L2Q6UWJ8 174 aa5.64□□□□□ -1.51
SSBP4-208ENST00000600628 SCXQ7RTU7 201 aa5.64□□□□□ -1.51
SSBP4-208ENST00000600628 PYGO1Q9Y3Y4 419 aa5.64□□□□□ -1.51
SSBP4-208ENST00000600628 PANO1I0J062 215 aa5.63□□□□□ -1.51
SSBP4-208ENST00000600628 FCER1GP30273 86 aa5.63□□□□□ -1.51
SSBP4-208ENST00000600628 CIRBP-AS1Q8TBR5 109 aa5.63□□□□□ -1.51
SSBP4-208ENST00000600628 TMEM101Q96IK0 257 aa5.63□□□□□ -1.51
SSBP4-208ENST00000600628 SPANXA1Q9NS26 97 aa5.63□□□□□ -1.51
SSBP4-208ENST00000600628 IGHV3OR16-9A0A0B4J2B5 98 aa5.62□□□□□ -1.51
SSBP4-208ENST00000600628 LINC01546A6NGU7 62 aa5.62□□□□□ -1.51
SSBP4-208ENST00000600628 K7EMI3 77 aa5.62□□□□□ -1.51
SSBP4-208ENST00000600628 S100PP25815 95 aa5.62□□□□□ -1.51
SSBP4-208ENST00000600628 SMAGPQ0VAQ4 97 aa5.62□□□□□ -1.51
SSBP4-208ENST00000600628 Q6ZUT4 128 aa5.62□□□□□ -1.51
SSBP4-208ENST00000600628 LINC00518Q8N0U6 118 aa5.62□□□□□ -1.51
SSBP4-208ENST00000600628 Q8N8P6 123 aa5.62□□□□□ -1.51
SSBP4-208ENST00000600628 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.62□□□□□ -1.51
SSBP4-208ENST00000600628 IGKV3OR2-268A0A0C4DH90 116 aa5.61□□□□□ -1.51
SSBP4-208ENST00000600628 hDV102S1A0JD36 115 aa5.61□□□□□ -1.51
SSBP4-208ENST00000600628 NPSP0C0P6 89 aa5.61□□□□□ -1.51
SSBP4-208ENST00000600628 AKR1D1P51857 326 aa5.61□□□□□ -1.51
SSBP4-208ENST00000600628 CFAP161Q6P656 301 aa5.61□□□□□ -1.51
SSBP4-208ENST00000600628 LINC00528Q8N1L1 170 aa5.61□□□□□ -1.51
SSBP4-208ENST00000600628 TMEM18Q96B42 140 aa5.61□□□□□ -1.51
SSBP4-208ENST00000600628 YPEL4Q96NS1 127 aa5.61□□□□□ -1.51
SSBP4-208ENST00000600628 GNB1LQ9BYB4 327 aa5.61□□□□□ -1.51
SSBP4-208ENST00000600628 DMBT1Q9UGM3 2413 aaPredicted RBP5.61□□□□□ -1.51
SSBP4-208ENST00000600628 IGLV4-3A0A075B6K6 122 aa5.6□□□□□ -1.51
SSBP4-208ENST00000600628 C5orf52A6NGY3 159 aa5.6□□□□□ -1.51
SSBP4-208ENST00000600628 PLA2G1BP04054 148 aaKnown RBP5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms