RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 NAT8BQ9UHF3 227 aa10.06□□□□□ -0.8
VRK3-221ENST00000600284 FAT3Q8TDW7 4589 aa10.05□□□□□ -0.8
VRK3-221ENST00000600284 A0A087WYN8 130 aa10.05□□□□□ -0.8
VRK3-221ENST00000600284 LINC00959A0A1B0GUT2 108 aa10.05□□□□□ -0.8
VRK3-221ENST00000600284 RPL23P62829 140 aaKnown RBP10.05□□□□□ -0.8
VRK3-221ENST00000600284 SMDT1Q9H4I9 107 aa10.05□□□□□ -0.8
VRK3-221ENST00000600284 CDC42SE2Q9NRR3 84 aa10.05□□□□□ -0.8
VRK3-221ENST00000600284 PKHD1L1Q86WI1 4243 aa10.05□□□□□ -0.8
VRK3-221ENST00000600284 C7orf77A4D0Y5 90 aa10.04□□□□□ -0.8
VRK3-221ENST00000600284 SMAGPQ0VAQ4 97 aa10.04□□□□□ -0.8
VRK3-221ENST00000600284 SS18Q15532 418 aa10.04□□□□□ -0.8
VRK3-221ENST00000600284 HIGD2BQ4VC39 106 aa10.04□□□□□ -0.8
VRK3-221ENST00000600284 SERTAD4-AS1Q5TG53 156 aa10.04□□□□□ -0.8
VRK3-221ENST00000600284 PLAC8Q9NZF1 115 aa10.04□□□□□ -0.8
VRK3-221ENST00000600284 NAT8Q9UHE5 227 aa10.04□□□□□ -0.8
VRK3-221ENST00000600284 A0A1B0GVG6 124 aa10.03□□□□□ -0.8
VRK3-221ENST00000600284 CCL25O15444 150 aa10.03□□□□□ -0.8
VRK3-221ENST00000600284 CHTF8P0CG12 524 aa10.03□□□□□ -0.8
VRK3-221ENST00000600284 XCL1P47992 114 aa10.03□□□□□ -0.8
VRK3-221ENST00000600284 COX6A2Q02221 97 aa10.03□□□□□ -0.8
VRK3-221ENST00000600284 PEA15Q15121 130 aa10.03□□□□□ -0.8
VRK3-221ENST00000600284 ZNF664Q8N3J9 261 aa10.03□□□□□ -0.8
VRK3-221ENST00000600284 PKIGQ9Y2B9 76 aa10.03□□□□□ -0.8
VRK3-221ENST00000600284 CSDC2Q9Y534 153 aaKnown RBP10.03□□□□□ -0.8
VRK3-221ENST00000600284 IGHV1-58A0A0C4DH39 117 aa10.02□□□□□ -0.81
VRK3-221ENST00000600284 A0A1B0GW15 77 aa10.02□□□□□ -0.81
VRK3-221ENST00000600284 SMIM27A0A1W2PRY6 76 aa10.02□□□□□ -0.81
VRK3-221ENST00000600284 LINC00862A6NCI5 91 aa10.02□□□□□ -0.81
VRK3-221ENST00000600284 PPP1R2P9O14990 202 aa10.02□□□□□ -0.81
VRK3-221ENST00000600284 FCER1GP30273 86 aa10.02□□□□□ -0.81
VRK3-221ENST00000600284 HNRNPA3P51991 378 aaKnown RBP10.02□□□□□ -0.81
VRK3-221ENST00000600284 SUMO2P61956 95 aaKnown RBP10.02□□□□□ -0.81
VRK3-221ENST00000600284 ADIRFQ15847 76 aa10.02□□□□□ -0.81
VRK3-221ENST00000600284 FAM104BQ5XKR9 115 aa10.02□□□□□ -0.81
VRK3-221ENST00000600284 CD164L2Q6UWJ8 174 aa10.02□□□□□ -0.81
VRK3-221ENST00000600284 NRACQ8N912 160 aa10.02□□□□□ -0.81
VRK3-221ENST00000600284 KIR2DL4Q99706 377 aa10.02□□□□□ -0.81
VRK3-221ENST00000600284 Q6ZRU5 148 aa10.01□□□□□ -0.81
VRK3-221ENST00000600284 PRSS3P2Q8NHM4 247 aa10.01□□□□□ -0.81
VRK3-221ENST00000600284 C9JQL5 133 aa10□□□□□ -0.81
VRK3-221ENST00000600284 SMKR1H3BMG3 65 aa10□□□□□ -0.81
VRK3-221ENST00000600284 C20orf78Q9BR46 151 aa10□□□□□ -0.81
VRK3-221ENST00000600284 LINC00474Q9P2X8 69 aa10□□□□□ -0.81
VRK3-221ENST00000600284 TRBV24-1A0A075B6N3 115 aa9.99□□□□□ -0.81
VRK3-221ENST00000600284 C1orf196B1AJZ1 125 aa9.99□□□□□ -0.81
VRK3-221ENST00000600284 MRPL51Q4U2R6 128 aaKnown RBP9.99□□□□□ -0.81
VRK3-221ENST00000600284 C7orf33Q8WU49 177 aa9.99□□□□□ -0.81
VRK3-221ENST00000600284 TMEM18Q96B42 140 aa9.99□□□□□ -0.81
VRK3-221ENST00000600284 UBE2D4Q9Y2X8 147 aa9.99□□□□□ -0.81
VRK3-221ENST00000600284 TCAPO15273 167 aa9.98□□□□□ -0.81
VRK3-221ENST00000600284 RPL32P62910 135 aaKnown RBP9.98□□□□□ -0.81
VRK3-221ENST00000600284 SRSF3P84103 164 aaKnown RBP9.98□□□□□ -0.81
VRK3-221ENST00000600284 MAJINQ3KP22 176 aa9.98□□□□□ -0.81
VRK3-221ENST00000600284 ZNF561-AS1K7EIQ3 104 aa9.97□□□□□ -0.81
VRK3-221ENST00000600284 S100A8P05109 93 aa9.97□□□□□ -0.81
VRK3-221ENST00000600284 CAMPP49913 170 aa9.97□□□□□ -0.81
VRK3-221ENST00000600284 TIMM21Q9BVV7 248 aa9.97□□□□□ -0.81
VRK3-221ENST00000600284 IGKV2-24A0A0C4DH68 120 aa9.96□□□□□ -0.82
VRK3-221ENST00000600284 CKS2P33552 79 aa9.96□□□□□ -0.82
VRK3-221ENST00000600284 STPG4Q8N801 248 aa9.96□□□□□ -0.82
VRK3-221ENST00000600284 CARD19Q96LW7 228 aa9.96□□□□□ -0.82
VRK3-221ENST00000600284 A0A096LNI7 61 aa9.95□□□□□ -0.82
VRK3-221ENST00000600284 F8W036 122 aa9.95□□□□□ -0.82
VRK3-221ENST00000600284 PHOX2AO14813 284 aa9.95□□□□□ -0.82
VRK3-221ENST00000600284 MALP21145 153 aa9.95□□□□□ -0.82
VRK3-221ENST00000600284 SYCNQ0VAF6 134 aa9.95□□□□□ -0.82
VRK3-221ENST00000600284 HMCN2Q8NDA2 5059 aa9.94□□□□□ -0.82
VRK3-221ENST00000600284 COX7A2LO14548 114 aa9.94□□□□□ -0.82
VRK3-221ENST00000600284 TNFRSF6BO95407 300 aa9.94□□□□□ -0.82
VRK3-221ENST00000600284 HBBP68871 147 aa9.94□□□□□ -0.82
VRK3-221ENST00000600284 PPBPP02775 128 aa9.93□□□□□ -0.82
VRK3-221ENST00000600284 LINC00526Q96FQ7 95 aa9.93□□□□□ -0.82
VRK3-221ENST00000600284 TRAV13-1A0A0B4J241 112 aa9.92□□□□□ -0.82
VRK3-221ENST00000600284 A0A1B0GXF2 115 aa9.92□□□□□ -0.82
VRK3-221ENST00000600284 MRPL54Q6P161 138 aaKnown RBP9.92□□□□□ -0.82
VRK3-221ENST00000600284 SMIM2Q9BVW6 85 aa9.92□□□□□ -0.82
VRK3-221ENST00000600284 IGLV4-69A0A075B6H9 119 aa9.91□□□□□ -0.82
VRK3-221ENST00000600284 D6R8Y8 96 aa9.91□□□□□ -0.82
VRK3-221ENST00000600284 APOMO95445 188 aa9.91□□□□□ -0.82
VRK3-221ENST00000600284 Q6ZUT4 128 aa9.91□□□□□ -0.82
VRK3-221ENST00000600284 ATP5L2Q7Z4Y8 100 aa9.91□□□□□ -0.82
VRK3-221ENST00000600284 C2orf48Q96LS8 159 aa9.91□□□□□ -0.82
VRK3-221ENST00000600284 LOC107984640A0A0U1RRK4 108 aa9.9□□□□□ -0.82
VRK3-221ENST00000600284 MT1HL1P0DM35 61 aa9.9□□□□□ -0.82
VRK3-221ENST00000600284 RNASE13Q5GAN3 156 aaKnown RBP9.9□□□□□ -0.82
VRK3-221ENST00000600284 SPANXA1Q9NS26 97 aa9.9□□□□□ -0.82
VRK3-221ENST00000600284 PTTG1IPP53801 180 aa9.89□□□□□ -0.83
VRK3-221ENST00000600284 PRR3P79522 188 aaKnown RBP9.89□□□□□ -0.83
VRK3-221ENST00000600284 MRPS36P82909 103 aaKnown RBP9.89□□□□□ -0.83
VRK3-221ENST00000600284 NPYP01303 97 aa9.88□□□□□ -0.83
VRK3-221ENST00000600284 RPL39P62891 51 aaKnown RBP9.88□□□□□ -0.83
VRK3-221ENST00000600284 C5orf38Q86SI9 138 aa9.88□□□□□ -0.83
VRK3-221ENST00000600284 ORMDL3Q8N138 153 aa9.88□□□□□ -0.83
VRK3-221ENST00000600284 CAMK2N2Q96S95 79 aa9.88□□□□□ -0.83
VRK3-221ENST00000600284 F8WDY8 70 aa9.87□□□□□ -0.83
VRK3-221ENST00000600284 TMEM136Q6ZRR5 245 aa9.87□□□□□ -0.83
VRK3-221ENST00000600284 OR10D4PQ8NGN7 298 aa9.87□□□□□ -0.83
VRK3-221ENST00000600284 FAM104AQ969W3 186 aa9.87□□□□□ -0.83
VRK3-221ENST00000600284 PLA2G2DQ9UNK4 145 aa9.87□□□□□ -0.83
VRK3-221ENST00000600284 PRSS47A8MTI9 375 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 143.5 ms