RNA–Protein interactions for RNA: ENST00000600244.5

SSBP4-207, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-207ENST00000600244 CBLN2Q8IUK8 224 aa11.16□□□□□ -0.62
SSBP4-207ENST00000600244 NCR2O95944 276 aa11.15□□□□□ -0.62
SSBP4-207ENST00000600244 PPBPP02775 128 aa11.15□□□□□ -0.62
SSBP4-207ENST00000600244 D6R8Y8 96 aa11.14□□□□□ -0.63
SSBP4-207ENST00000600244 PPP1R17O96001 155 aa11.14□□□□□ -0.63
SSBP4-207ENST00000600244 HLA-DQA1P01909 254 aa11.14□□□□□ -0.63
SSBP4-207ENST00000600244 CKS2P33552 79 aa11.14□□□□□ -0.63
SSBP4-207ENST00000600244 POLR2KP53803 58 aaKnown RBP11.14□□□□□ -0.63
SSBP4-207ENST00000600244 DGAT2L7PQ6IED9 249 aa11.14□□□□□ -0.63
SSBP4-207ENST00000600244 NTM-AS1Q6ZSK4 140 aa11.14□□□□□ -0.63
SSBP4-207ENST00000600244 PHOX2AO14813 284 aa11.13□□□□□ -0.63
SSBP4-207ENST00000600244 ATP6V1G1O75348 118 aa11.13□□□□□ -0.63
SSBP4-207ENST00000600244 MT-ND6P03923 174 aa11.13□□□□□ -0.63
SSBP4-207ENST00000600244 ORMDL3Q8N138 153 aa11.13□□□□□ -0.63
SSBP4-207ENST00000600244 KLK12Q9UKR0 248 aa11.13□□□□□ -0.63
SSBP4-207ENST00000600244 TRBV27A0A0K0K1C4 114 aa11.12□□□□□ -0.63
SSBP4-207ENST00000600244 SDHAF1A6NFY7 115 aa11.12□□□□□ -0.63
SSBP4-207ENST00000600244 NPYP01303 97 aa11.12□□□□□ -0.63
SSBP4-207ENST00000600244 S100A1P23297 94 aa11.12□□□□□ -0.63
SSBP4-207ENST00000600244 RPL32P62910 135 aaKnown RBP11.12□□□□□ -0.63
SSBP4-207ENST00000600244 NIT1Q86X76 327 aa11.12□□□□□ -0.63
SSBP4-207ENST00000600244 C20orf78Q9BR46 151 aa11.12□□□□□ -0.63
SSBP4-207ENST00000600244 ST20Q9HBF5 79 aa11.12□□□□□ -0.63
SSBP4-207ENST00000600244 TRBV6-8A0A0A6YYG3 113 aa11.11□□□□□ -0.63
SSBP4-207ENST00000600244 PRSS47A8MTI9 375 aa11.11□□□□□ -0.63
SSBP4-207ENST00000600244 TNFRSF6BO95407 300 aa11.11□□□□□ -0.63
SSBP4-207ENST00000600244 SUMO2P61956 95 aaKnown RBP11.11□□□□□ -0.63
SSBP4-207ENST00000600244 TMEM97Q5BJF2 176 aa11.11□□□□□ -0.63
SSBP4-207ENST00000600244 UBE2WQ96B02 151 aa11.11□□□□□ -0.63
SSBP4-207ENST00000600244 APCSP02743 223 aa11.1□□□□□ -0.63
SSBP4-207ENST00000600244 PRSS1P07477 247 aa11.1□□□□□ -0.63
SSBP4-207ENST00000600244 IQCJQ1A5X6 159 aa11.1□□□□□ -0.63
SSBP4-207ENST00000600244 PRELID3AQ96N28 172 aa11.1□□□□□ -0.63
SSBP4-207ENST00000600244 LAMTOR2Q9Y2Q5 125 aa11.1□□□□□ -0.63
SSBP4-207ENST00000600244 SCO1O75880 301 aa11.09□□□□□ -0.63
SSBP4-207ENST00000600244 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.09□□□□□ -0.63
SSBP4-207ENST00000600244 MRPL18Q9H0U6 180 aaKnown RBP11.09□□□□□ -0.63
SSBP4-207ENST00000600244 COLCA2A8K830 154 aa11.08□□□□□ -0.64
SSBP4-207ENST00000600244 USP17L23D6RBM5 183 aa11.08□□□□□ -0.64
SSBP4-207ENST00000600244 I3L3M4 83 aa11.08□□□□□ -0.64
SSBP4-207ENST00000600244 VCYO14598 125 aa11.08□□□□□ -0.64
SSBP4-207ENST00000600244 KIAA1644Q3SXP7 199 aa11.08□□□□□ -0.64
SSBP4-207ENST00000600244 A0A087WYN8 130 aa11.07□□□□□ -0.64
SSBP4-207ENST00000600244 TSHBP01222 138 aa11.07□□□□□ -0.64
SSBP4-207ENST00000600244 COTL1Q14019 142 aa11.07□□□□□ -0.64
SSBP4-207ENST00000600244 IGHV1-24A0A0C4DH33 117 aa11.06□□□□□ -0.64
SSBP4-207ENST00000600244 PMCHP20382 165 aa11.06□□□□□ -0.64
SSBP4-207ENST00000600244 FABP9Q0Z7S8 132 aa11.06□□□□□ -0.64
SSBP4-207ENST00000600244 ALKBH7Q9BT30 221 aaPredicted RBP11.06□□□□□ -0.64
SSBP4-207ENST00000600244 SMIM2Q9BVW6 85 aa11.06□□□□□ -0.64
SSBP4-207ENST00000600244 TRAPPC1Q9Y5R8 145 aa11.06□□□□□ -0.64
SSBP4-207ENST00000600244 TRBV25-1A0A075B6N4 114 aa11.05□□□□□ -0.64
SSBP4-207ENST00000600244 ESDP10768 282 aa11.05□□□□□ -0.64
SSBP4-207ENST00000600244 Q0VG73 95 aa11.04□□□□□ -0.64
SSBP4-207ENST00000600244 CHCHD7Q9BUK0 85 aa11.04□□□□□ -0.64
SSBP4-207ENST00000600244 C1orf43Q9BWL3 253 aa11.04□□□□□ -0.64
SSBP4-207ENST00000600244 MAP1LC3AQ9H492 121 aa11.04□□□□□ -0.64
SSBP4-207ENST00000600244 REG3GQ6UW15 175 aa11.03□□□□□ -0.64
SSBP4-207ENST00000600244 TMEM243Q9BU79 118 aa11.03□□□□□ -0.64
SSBP4-207ENST00000600244 PLAC8Q9NZF1 115 aa11.03□□□□□ -0.64
SSBP4-207ENST00000600244 RAB5AP20339 215 aa11.02□□□□□ -0.65
SSBP4-207ENST00000600244 AMTP48728 403 aa11.02□□□□□ -0.65
SSBP4-207ENST00000600244 PRR3P79522 188 aaKnown RBP11.02□□□□□ -0.65
SSBP4-207ENST00000600244 ENHOQ6UWT2 76 aa11.02□□□□□ -0.65
SSBP4-207ENST00000600244 KIR2DL4Q99706 377 aa11.02□□□□□ -0.65
SSBP4-207ENST00000600244 SPINK6Q6UWN8 80 aa11.01□□□□□ -0.65
SSBP4-207ENST00000600244 Q8N8P6 123 aa11.01□□□□□ -0.65
SSBP4-207ENST00000600244 C7orf33Q8WU49 177 aa11.01□□□□□ -0.65
SSBP4-207ENST00000600244 DPH3Q96FX2 82 aa11.01□□□□□ -0.65
SSBP4-207ENST00000600244 CHCHD5Q9BSY4 110 aa11.01□□□□□ -0.65
SSBP4-207ENST00000600244 LOC389332A0A1B0GUA5 103 aa11□□□□□ -0.65
SSBP4-207ENST00000600244 H7C423 109 aa11□□□□□ -0.65
SSBP4-207ENST00000600244 TCAPO15273 167 aa11□□□□□ -0.65
SSBP4-207ENST00000600244 CHTF8P0CG12 524 aa11□□□□□ -0.65
SSBP4-207ENST00000600244 PKIAP61925 76 aa11□□□□□ -0.65
SSBP4-207ENST00000600244 SPACA4Q8TDM5 124 aa11□□□□□ -0.65
SSBP4-207ENST00000600244 A0A087WX48 190 aa10.99□□□□□ -0.65
SSBP4-207ENST00000600244 A0A1B0GUV1 79 aa10.99□□□□□ -0.65
SSBP4-207ENST00000600244 LINC01546A6NGU7 62 aa10.99□□□□□ -0.65
SSBP4-207ENST00000600244 IFI27P40305 119 aaPredicted RBP10.99□□□□□ -0.65
SSBP4-207ENST00000600244 GAGE6Q13070 117 aa10.99□□□□□ -0.65
SSBP4-207ENST00000600244 MPV17L2Q567V2 206 aa10.99□□□□□ -0.65
SSBP4-207ENST00000600244 NXT2Q9NPJ8 142 aaKnown RBP10.99□□□□□ -0.65
SSBP4-207ENST00000600244 K7EMI3 77 aa10.98□□□□□ -0.65
SSBP4-207ENST00000600244 TRGC2P03986 189 aa10.98□□□□□ -0.65
SSBP4-207ENST00000600244 FCER1GP30273 86 aa10.98□□□□□ -0.65
SSBP4-207ENST00000600244 RBX1P62877 108 aa10.98□□□□□ -0.65
SSBP4-207ENST00000600244 C18orf32Q8TCD1 76 aa10.98□□□□□ -0.65
SSBP4-207ENST00000600244 TMEM262E9PQX1 116 aa10.97□□□□□ -0.65
SSBP4-207ENST00000600244 CNBPP62633 177 aaKnown RBP10.97□□□□□ -0.65
SSBP4-207ENST00000600244 SRSF9Q13242 221 aaKnown RBP eCLIP10.97□□□□□ -0.65
SSBP4-207ENST00000600244 C20orf203Q8NBC4 194 aa10.97□□□□□ -0.65
SSBP4-207ENST00000600244 CRCT1Q9UGL9 99 aa10.97□□□□□ -0.65
SSBP4-207ENST00000600244 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.96□□□□□ -0.65
SSBP4-207ENST00000600244 IGKV2-29A2NJV5 120 aaPredicted RBP10.96□□□□□ -0.65
SSBP4-207ENST00000600244 MRPL52Q86TS9 123 aaKnown RBP10.96□□□□□ -0.65
SSBP4-207ENST00000600244 IGLV4-60A0A075B6I1 120 aa10.95□□□□□ -0.66
SSBP4-207ENST00000600244 FGF6P10767 208 aa10.95□□□□□ -0.66
SSBP4-207ENST00000600244 KRTAP26-1Q6PEX3 210 aa10.95□□□□□ -0.66
SSBP4-207ENST00000600244 URB1-AS1Q96HZ7 61 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms