RNA–Protein interactions for RNA: ENST00000596938.1

CCDC9-203, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-203ENST00000596938 C7orf77A4D0Y5 90 aa6.75□□□□□ -1.33
CCDC9-203ENST00000596938 SMKR1H3BMG3 65 aa6.75□□□□□ -1.33
CCDC9-203ENST00000596938 PPP1R2P9O14990 202 aa6.75□□□□□ -1.33
CCDC9-203ENST00000596938 KRTAP10-4P60372 401 aaPredicted RBP6.75□□□□□ -1.33
CCDC9-203ENST00000596938 SUMO2P61956 95 aaKnown RBP6.75□□□□□ -1.33
CCDC9-203ENST00000596938 CIRBPQ14011 172 aaKnown RBP6.75□□□□□ -1.33
CCDC9-203ENST00000596938 MRPL51Q4U2R6 128 aaKnown RBP6.75□□□□□ -1.33
CCDC9-203ENST00000596938 ZNF664Q8N3J9 261 aa6.75□□□□□ -1.33
CCDC9-203ENST00000596938 C15orf56Q8N910 161 aa6.75□□□□□ -1.33
CCDC9-203ENST00000596938 C20orf78Q9BR46 151 aa6.75□□□□□ -1.33
CCDC9-203ENST00000596938 CSDC2Q9Y534 153 aaKnown RBP6.75□□□□□ -1.33
CCDC9-203ENST00000596938 IGHV3-64A0A075B6Q5 118 aa6.74□□□□□ -1.33
CCDC9-203ENST00000596938 S100A8P05109 93 aa6.74□□□□□ -1.33
CCDC9-203ENST00000596938 FCER1GP30273 86 aa6.74□□□□□ -1.33
CCDC9-203ENST00000596938 CAMPP49913 170 aa6.74□□□□□ -1.33
CCDC9-203ENST00000596938 RPL32P62910 135 aaKnown RBP6.74□□□□□ -1.33
CCDC9-203ENST00000596938 SMAGPQ0VAQ4 97 aa6.74□□□□□ -1.33
CCDC9-203ENST00000596938 FOXI1Q12951 378 aa6.74□□□□□ -1.33
CCDC9-203ENST00000596938 KIR2DL4Q99706 377 aa6.74□□□□□ -1.33
CCDC9-203ENST00000596938 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.74□□□□□ -1.33
CCDC9-203ENST00000596938 F8W036 122 aa6.73□□□□□ -1.33
CCDC9-203ENST00000596938 PANO1I0J062 215 aa6.73□□□□□ -1.33
CCDC9-203ENST00000596938 CKS2P33552 79 aa6.73□□□□□ -1.33
CCDC9-203ENST00000596938 RAB14P61106 215 aa6.73□□□□□ -1.33
CCDC9-203ENST00000596938 SS18Q15532 418 aa6.73□□□□□ -1.33
CCDC9-203ENST00000596938 DMBT1Q9UGM3 2413 aaPredicted RBP6.72□□□□□ -1.33
CCDC9-203ENST00000596938 FLG2Q5D862 2391 aaPredicted RBP6.72□□□□□ -1.33
CCDC9-203ENST00000596938 GVQW2A0A096LPI5 108 aaPredicted RBP6.72□□□□□ -1.33
CCDC9-203ENST00000596938 A0A1B0GXF2 115 aa6.72□□□□□ -1.33
CCDC9-203ENST00000596938 TCAPO15273 167 aa6.72□□□□□ -1.33
CCDC9-203ENST00000596938 CCL25O15444 150 aa6.72□□□□□ -1.33
CCDC9-203ENST00000596938 XCL1P47992 114 aa6.72□□□□□ -1.33
CCDC9-203ENST00000596938 HBBP68871 147 aa6.72□□□□□ -1.33
CCDC9-203ENST00000596938 CD164L2Q6UWJ8 174 aa6.72□□□□□ -1.33
CCDC9-203ENST00000596938 TIMM21Q9BVV7 248 aa6.72□□□□□ -1.33
CCDC9-203ENST00000596938 UBE2D4Q9Y2X8 147 aa6.72□□□□□ -1.33
CCDC9-203ENST00000596938 KRTAP29-1A8MX34 341 aaPredicted RBP6.71□□□□□ -1.34
CCDC9-203ENST00000596938 C1orf196B1AJZ1 125 aa6.71□□□□□ -1.34
CCDC9-203ENST00000596938 PHOX2AO14813 284 aa6.71□□□□□ -1.34
CCDC9-203ENST00000596938 TNFRSF6BO95407 300 aa6.71□□□□□ -1.34
CCDC9-203ENST00000596938 PPBPP02775 128 aa6.71□□□□□ -1.34
CCDC9-203ENST00000596938 PNRC1Q12796 327 aaPredicted RBP6.71□□□□□ -1.34
CCDC9-203ENST00000596938 HIGD2BQ4VC39 106 aa6.71□□□□□ -1.34
CCDC9-203ENST00000596938 MRPL54Q6P161 138 aaKnown RBP6.71□□□□□ -1.34
CCDC9-203ENST00000596938 ATP5L2Q7Z4Y8 100 aa6.71□□□□□ -1.34
CCDC9-203ENST00000596938 TMEM18Q96B42 140 aa6.71□□□□□ -1.34
CCDC9-203ENST00000596938 DPH3Q96FX2 82 aa6.71□□□□□ -1.34
CCDC9-203ENST00000596938 IGHV1-58A0A0C4DH39 117 aa6.7□□□□□ -1.34
CCDC9-203ENST00000596938 RPL37AP61513 92 aaKnown RBP6.7□□□□□ -1.34
CCDC9-203ENST00000596938 LRP1Q07954 4544 aaKnown RBP6.69□□□□□ -1.34
CCDC9-203ENST00000596938 A0A087WYN8 130 aa6.69□□□□□ -1.34
CCDC9-203ENST00000596938 D6R8Y8 96 aa6.69□□□□□ -1.34
CCDC9-203ENST00000596938 MT-ND4LP03901 98 aa6.69□□□□□ -1.34
CCDC9-203ENST00000596938 COX6A2Q02221 97 aa6.69□□□□□ -1.34
CCDC9-203ENST00000596938 SPACA4Q8TDM5 124 aa6.69□□□□□ -1.34
CCDC9-203ENST00000596938 FAT3Q8TDW7 4589 aa6.69□□□□□ -1.34
CCDC9-203ENST00000596938 PKHD1L1Q86WI1 4243 aa6.68□□□□□ -1.34
CCDC9-203ENST00000596938 PRSS47A8MTI9 375 aa6.68□□□□□ -1.34
CCDC9-203ENST00000596938 J3QL48 77 aa6.68□□□□□ -1.34
CCDC9-203ENST00000596938 CLLU1Q5K131 121 aa6.68□□□□□ -1.34
CCDC9-203ENST00000596938 TMEM136Q6ZRR5 245 aa6.68□□□□□ -1.34
CCDC9-203ENST00000596938 ORMDL3Q8N138 153 aa6.68□□□□□ -1.34
CCDC9-203ENST00000596938 PRSS3P2Q8NHM4 247 aa6.68□□□□□ -1.34
CCDC9-203ENST00000596938 ANAPC16Q96DE5 110 aa6.68□□□□□ -1.34
CCDC9-203ENST00000596938 SMIM2Q9BVW6 85 aa6.68□□□□□ -1.34
CCDC9-203ENST00000596938 PLAC8Q9NZF1 115 aa6.68□□□□□ -1.34
CCDC9-203ENST00000596938 ZNF561-AS1K7EIQ3 104 aa6.67□□□□□ -1.34
CCDC9-203ENST00000596938 COX7A2LO14548 114 aa6.67□□□□□ -1.34
CCDC9-203ENST00000596938 OXTP01178 125 aa6.67□□□□□ -1.34
CCDC9-203ENST00000596938 NPYP01303 97 aa6.67□□□□□ -1.34
CCDC9-203ENST00000596938 CHTF8P0CG12 524 aa6.67□□□□□ -1.34
CCDC9-203ENST00000596938 LINC00474Q9P2X8 69 aa6.67□□□□□ -1.34
CCDC9-203ENST00000596938 PKIGQ9Y2B9 76 aa6.67□□□□□ -1.34
CCDC9-203ENST00000596938 TRAV13-1A0A0B4J241 112 aa6.66□□□□□ -1.34
CCDC9-203ENST00000596938 MALP21145 153 aa6.66□□□□□ -1.34
CCDC9-203ENST00000596938 MRPS36P82909 103 aaKnown RBP6.66□□□□□ -1.34
CCDC9-203ENST00000596938 Q6ZUT4 128 aa6.66□□□□□ -1.34
CCDC9-203ENST00000596938 FAM104AQ969W3 186 aa6.66□□□□□ -1.34
CCDC9-203ENST00000596938 PRELID3AQ96N28 172 aa6.66□□□□□ -1.34
CCDC9-203ENST00000596938 SPANXA1Q9NS26 97 aa6.66□□□□□ -1.34
CCDC9-203ENST00000596938 LAMTOR2Q9Y2Q5 125 aa6.66□□□□□ -1.34
CCDC9-203ENST00000596938 RAB5AP20339 215 aa6.65□□□□□ -1.34
CCDC9-203ENST00000596938 RPL39P62891 51 aaKnown RBP6.65□□□□□ -1.34
CCDC9-203ENST00000596938 SYCNQ0VAF6 134 aa6.65□□□□□ -1.34
CCDC9-203ENST00000596938 RNASE13Q5GAN3 156 aaKnown RBP6.65□□□□□ -1.34
CCDC9-203ENST00000596938 LINC00526Q96FQ7 95 aa6.65□□□□□ -1.34
CCDC9-203ENST00000596938 MAJINQ3KP22 176 aa6.64□□□□□ -1.35
CCDC9-203ENST00000596938 UQCC3Q6UW78 93 aa6.64□□□□□ -1.35
CCDC9-203ENST00000596938 CARD19Q96LW7 228 aa6.64□□□□□ -1.35
CCDC9-203ENST00000596938 IMMP2LQ96T52 175 aa6.64□□□□□ -1.35
CCDC9-203ENST00000596938 PYGO1Q9Y3Y4 419 aa6.64□□□□□ -1.35
CCDC9-203ENST00000596938 IGLV4-69A0A075B6H9 119 aa6.63□□□□□ -1.35
CCDC9-203ENST00000596938 A0A096LNI7 61 aa6.63□□□□□ -1.35
CCDC9-203ENST00000596938 IGHV3OR16-9A0A0B4J2B5 98 aa6.63□□□□□ -1.35
CCDC9-203ENST00000596938 IGKV2-24A0A0C4DH68 120 aa6.63□□□□□ -1.35
CCDC9-203ENST00000596938 APOMO95445 188 aa6.63□□□□□ -1.35
CCDC9-203ENST00000596938 HNRNPA3P51991 378 aaKnown RBP6.63□□□□□ -1.35
CCDC9-203ENST00000596938 IFITM2Q01629 132 aa6.63□□□□□ -1.35
CCDC9-203ENST00000596938 C5orf38Q86SI9 138 aa6.63□□□□□ -1.35
CCDC9-203ENST00000596938 STPG4Q8N801 248 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms