RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 C20orf78Q9BR46 151 aa7.13□□□□□ -1.27
SHKBP1-206ENST00000595523 GAGE12HA6NDE8 117 aa7.12□□□□□ -1.27
SHKBP1-206ENST00000595523 SMR3BP02814 79 aaPredicted RBP7.12□□□□□ -1.27
SHKBP1-206ENST00000595523 FCER1GP30273 86 aa7.12□□□□□ -1.27
SHKBP1-206ENST00000595523 COMMD7Q86VX2 200 aa7.12□□□□□ -1.27
SHKBP1-206ENST00000595523 OR5A1Q8NGJ0 315 aa7.12□□□□□ -1.27
SHKBP1-206ENST00000595523 SMIM2Q9BVW6 85 aa7.12□□□□□ -1.27
SHKBP1-206ENST00000595523 CDC42SE2Q9NRR3 84 aa7.12□□□□□ -1.27
SHKBP1-206ENST00000595523 MYCBP2O75592 4640 aa7.12□□□□□ -1.27
SHKBP1-206ENST00000595523 FLG2Q5D862 2391 aaPredicted RBP7.11□□□□□ -1.27
SHKBP1-206ENST00000595523 C15orf56Q8N910 161 aa7.11□□□□□ -1.27
SHKBP1-206ENST00000595523 CHCHD10Q8WYQ3 142 aaPredicted RBP7.11□□□□□ -1.27
SHKBP1-206ENST00000595523 TMEM101Q96IK0 257 aa7.11□□□□□ -1.27
SHKBP1-206ENST00000595523 KIR2DL4Q99706 377 aa7.11□□□□□ -1.27
SHKBP1-206ENST00000595523 SEC11CQ9BY50 192 aa7.11□□□□□ -1.27
SHKBP1-206ENST00000595523 UBE2D4Q9Y2X8 147 aa7.11□□□□□ -1.27
SHKBP1-206ENST00000595523 LINC00959A0A1B0GUT2 108 aa7.1□□□□□ -1.27
SHKBP1-206ENST00000595523 PHOX2AO14813 284 aa7.1□□□□□ -1.27
SHKBP1-206ENST00000595523 PPBPP02775 128 aa7.1□□□□□ -1.27
SHKBP1-206ENST00000595523 SLPIP03973 132 aa7.1□□□□□ -1.27
SHKBP1-206ENST00000595523 FOXI1Q12951 378 aa7.1□□□□□ -1.27
SHKBP1-206ENST00000595523 Q5VSD8 79 aa7.1□□□□□ -1.27
SHKBP1-206ENST00000595523 TMEM136Q6ZRR5 245 aa7.1□□□□□ -1.27
SHKBP1-206ENST00000595523 ORMDL3Q8N138 153 aa7.1□□□□□ -1.27
SHKBP1-206ENST00000595523 ZNF664Q8N3J9 261 aa7.1□□□□□ -1.27
SHKBP1-206ENST00000595523 FAM104AQ969W3 186 aa7.1□□□□□ -1.27
SHKBP1-206ENST00000595523 BTF3L4Q96K17 158 aa7.1□□□□□ -1.27
SHKBP1-206ENST00000595523 hDV102S1A0JD36 115 aa7.09□□□□□ -1.27
SHKBP1-206ENST00000595523 EPM2AB3EWF7 344 aa7.09□□□□□ -1.27
SHKBP1-206ENST00000595523 CNBPP62633 177 aaKnown RBP7.09□□□□□ -1.27
SHKBP1-206ENST00000595523 RPL39P62891 51 aaKnown RBP7.09□□□□□ -1.27
SHKBP1-206ENST00000595523 C10orf91Q5T1B1 145 aa7.09□□□□□ -1.27
SHKBP1-206ENST00000595523 DGAT2L7PQ6IED9 249 aa7.09□□□□□ -1.27
SHKBP1-206ENST00000595523 SCXQ7RTU7 201 aa7.09□□□□□ -1.27
SHKBP1-206ENST00000595523 C9orf163Q8N9P6 203 aa7.09□□□□□ -1.27
SHKBP1-206ENST00000595523 CLRN3Q8NCR9 226 aa7.09□□□□□ -1.27
SHKBP1-206ENST00000595523 PRELID3AQ96N28 172 aa7.09□□□□□ -1.27
SHKBP1-206ENST00000595523 IMMP2LQ96T52 175 aa7.09□□□□□ -1.27
SHKBP1-206ENST00000595523 CSDC2Q9Y534 153 aaKnown RBP7.09□□□□□ -1.27
SHKBP1-206ENST00000595523 TCAPO15273 167 aa7.08□□□□□ -1.28
SHKBP1-206ENST00000595523 CCL25O15444 150 aa7.08□□□□□ -1.28
SHKBP1-206ENST00000595523 XCL1P47992 114 aa7.08□□□□□ -1.28
SHKBP1-206ENST00000595523 RNASE13Q5GAN3 156 aaKnown RBP7.08□□□□□ -1.28
SHKBP1-206ENST00000595523 Q6ZUT4 128 aa7.08□□□□□ -1.28
SHKBP1-206ENST00000595523 TIMM21Q9BVV7 248 aa7.08□□□□□ -1.28
SHKBP1-206ENST00000595523 CTDSP1Q9GZU7 261 aa7.08□□□□□ -1.28
SHKBP1-206ENST00000595523 PRSS47A8MTI9 375 aa7.07□□□□□ -1.28
SHKBP1-206ENST00000595523 PANO1I0J062 215 aa7.07□□□□□ -1.28
SHKBP1-206ENST00000595523 SDIM1Q6ZPB5 146 aa7.07□□□□□ -1.28
SHKBP1-206ENST00000595523 CHAC1Q9BUX1 264 aa7.07□□□□□ -1.28
SHKBP1-206ENST00000595523 CARHSP1Q9Y2V2 147 aaKnown RBP7.07□□□□□ -1.28
SHKBP1-206ENST00000595523 GVQW2A0A096LPI5 108 aaPredicted RBP7.06□□□□□ -1.28
SHKBP1-206ENST00000595523 HIGD2BQ4VC39 106 aa7.06□□□□□ -1.28
SHKBP1-206ENST00000595523 CIRBP-AS1Q8TBR5 109 aa7.06□□□□□ -1.28
SHKBP1-206ENST00000595523 OPRPNQ99935 248 aaPredicted RBP7.06□□□□□ -1.28
SHKBP1-206ENST00000595523 LAMTOR2Q9Y2Q5 125 aa7.06□□□□□ -1.28
SHKBP1-206ENST00000595523 DMBT1Q9UGM3 2413 aaPredicted RBP7.05□□□□□ -1.28
SHKBP1-206ENST00000595523 TRAV9-1A0A075B6T8 112 aa7.05□□□□□ -1.28
SHKBP1-206ENST00000595523 SS18Q15532 418 aa7.05□□□□□ -1.28
SHKBP1-206ENST00000595523 CD164L2Q6UWJ8 174 aa7.05□□□□□ -1.28
SHKBP1-206ENST00000595523 TMEM18Q96B42 140 aa7.05□□□□□ -1.28
SHKBP1-206ENST00000595523 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.05□□□□□ -1.28
SHKBP1-206ENST00000595523 LOC389332A0A1B0GUA5 103 aa7.04□□□□□ -1.28
SHKBP1-206ENST00000595523 SMAGPQ0VAQ4 97 aa7.04□□□□□ -1.28
SHKBP1-206ENST00000595523 CFAP161Q6P656 301 aa7.04□□□□□ -1.28
SHKBP1-206ENST00000595523 Q8N8P6 123 aa7.04□□□□□ -1.28
SHKBP1-206ENST00000595523 MAP1LC3AQ9H492 121 aa7.04□□□□□ -1.28
SHKBP1-206ENST00000595523 TRAV13-1A0A0B4J241 112 aa7.03□□□□□ -1.28
SHKBP1-206ENST00000595523 C1orf196B1AJZ1 125 aa7.03□□□□□ -1.28
SHKBP1-206ENST00000595523 FAM229AH3BQW9 127 aa7.03□□□□□ -1.28
SHKBP1-206ENST00000595523 MRPS36P82909 103 aaKnown RBP7.03□□□□□ -1.28
SHKBP1-206ENST00000595523 CIRBPQ14011 172 aaKnown RBP7.03□□□□□ -1.28
SHKBP1-206ENST00000595523 RHEBQ15382 184 aa7.03□□□□□ -1.28
SHKBP1-206ENST00000595523 KIAA1644Q3SXP7 199 aa7.03□□□□□ -1.28
SHKBP1-206ENST00000595523 LINC00528Q8N1L1 170 aa7.03□□□□□ -1.28
SHKBP1-206ENST00000595523 SPANXA1Q9NS26 97 aa7.03□□□□□ -1.28
SHKBP1-206ENST00000595523 AP5S1Q9NUS5 200 aa7.03□□□□□ -1.28
SHKBP1-206ENST00000595523 IGHV3-64A0A075B6Q5 118 aa7.02□□□□□ -1.29
SHKBP1-206ENST00000595523 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.02□□□□□ -1.29
SHKBP1-206ENST00000595523 IGHV1-58A0A0C4DH39 117 aa7.02□□□□□ -1.29
SHKBP1-206ENST00000595523 RAB5AP20339 215 aa7.02□□□□□ -1.29
SHKBP1-206ENST00000595523 KRTAP10-4P60372 401 aaPredicted RBP7.02□□□□□ -1.29
SHKBP1-206ENST00000595523 LINC00526Q96FQ7 95 aa7.02□□□□□ -1.29
SHKBP1-206ENST00000595523 HERC1Q15751 4861 aa7.02□□□□□ -1.29
SHKBP1-206ENST00000595523 PKHD1L1Q86WI1 4243 aa7.01□□□□□ -1.29
SHKBP1-206ENST00000595523 CHTF8P0CG12 524 aa7.01□□□□□ -1.29
SHKBP1-206ENST00000595523 INAFM2P0DMQ5 153 aa7.01□□□□□ -1.29
SHKBP1-206ENST00000595523 S100PP25815 95 aa7.01□□□□□ -1.29
SHKBP1-206ENST00000595523 GNB1LQ9BYB4 327 aa7.01□□□□□ -1.29
SHKBP1-206ENST00000595523 RPS10P5Q9NQ39 176 aa7.01□□□□□ -1.29
SHKBP1-206ENST00000595523 PYGO1Q9Y3Y4 419 aa7.01□□□□□ -1.29
SHKBP1-206ENST00000595523 IGLV4-3A0A075B6K6 122 aa7□□□□□ -1.29
SHKBP1-206ENST00000595523 COX7A2LO14548 114 aa7□□□□□ -1.29
SHKBP1-206ENST00000595523 IFI27P40305 119 aaPredicted RBP7□□□□□ -1.29
SHKBP1-206ENST00000595523 C2orf66Q6UXQ4 117 aa7□□□□□ -1.29
SHKBP1-206ENST00000595523 PRSS3P2Q8NHM4 247 aa7□□□□□ -1.29
SHKBP1-206ENST00000595523 LRP1Q07954 4544 aaKnown RBP7□□□□□ -1.29
SHKBP1-206ENST00000595523 IGHV3OR16-9A0A0B4J2B5 98 aa6.99□□□□□ -1.29
SHKBP1-206ENST00000595523 IFITM10A6NMD0 228 aa6.99□□□□□ -1.29
SHKBP1-206ENST00000595523 COX6A2Q02221 97 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms