RNA–Protein interactions for RNA: ENST00000594828.7

LSM4-204, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-204ENST00000594828 VCYO14598 125 aa14.97□□□□□ -0.01
LSM4-204ENST00000594828 PPP1R17O96001 155 aa14.97□□□□□ -0.01
LSM4-204ENST00000594828 FOXI1Q12951 378 aa14.97□□□□□ -0.01
LSM4-204ENST00000594828 PEA15Q15121 130 aa14.97□□□□□ -0.01
LSM4-204ENST00000594828 LINC00959A0A1B0GUT2 108 aa14.96□□□□□ -0.01
LSM4-204ENST00000594828 CHTF8P0CG12 524 aa14.96□□□□□ -0.01
LSM4-204ENST00000594828 XCL1P47992 114 aa14.96□□□□□ -0.01
LSM4-204ENST00000594828 SRSF3P84103 164 aaKnown RBP14.96□□□□□ -0.01
LSM4-204ENST00000594828 C7orf77A4D0Y5 90 aa14.95□□□□□ -0.02
LSM4-204ENST00000594828 MRPL52Q86TS9 123 aaKnown RBP14.95□□□□□ -0.02
LSM4-204ENST00000594828 CDC42SE2Q9NRR3 84 aa14.95□□□□□ -0.02
LSM4-204ENST00000594828 A0A087WYN8 130 aa14.94□□□□□ -0.02
LSM4-204ENST00000594828 GVQW2A0A096LPI5 108 aaPredicted RBP14.94□□□□□ -0.02
LSM4-204ENST00000594828 SMIM27A0A1W2PRY6 76 aa14.94□□□□□ -0.02
LSM4-204ENST00000594828 CCL25O15444 150 aa14.94□□□□□ -0.02
LSM4-204ENST00000594828 OXTP01178 125 aa14.94□□□□□ -0.02
LSM4-204ENST00000594828 FCER1GP30273 86 aa14.94□□□□□ -0.02
LSM4-204ENST00000594828 ZNF664Q8N3J9 261 aa14.94□□□□□ -0.02
LSM4-204ENST00000594828 NRACQ8N912 160 aa14.94□□□□□ -0.02
LSM4-204ENST00000594828 SMDT1Q9H4I9 107 aa14.94□□□□□ -0.02
LSM4-204ENST00000594828 SUMO2P61956 95 aaKnown RBP14.93□□□□□ -0.02
LSM4-204ENST00000594828 COX6A2Q02221 97 aa14.93□□□□□ -0.02
LSM4-204ENST00000594828 SS18Q15532 418 aa14.93□□□□□ -0.02
LSM4-204ENST00000594828 FAM104BQ5XKR9 115 aa14.93□□□□□ -0.02
LSM4-204ENST00000594828 SPACA4Q8TDM5 124 aa14.93□□□□□ -0.02
LSM4-204ENST00000594828 CAMPP49913 170 aa14.91□□□□□ -0.02
LSM4-204ENST00000594828 HNRNPA3P51991 378 aaKnown RBP14.91□□□□□ -0.02
LSM4-204ENST00000594828 MRPL51Q4U2R6 128 aaKnown RBP14.91□□□□□ -0.02
LSM4-204ENST00000594828 KIR2DL4Q99706 377 aa14.91□□□□□ -0.02
LSM4-204ENST00000594828 PPP1R2P9O14990 202 aa14.9□□□□□ -0.02
LSM4-204ENST00000594828 PRSS3P2Q8NHM4 247 aa14.9□□□□□ -0.02
LSM4-204ENST00000594828 IGHV1-58A0A0C4DH39 117 aa14.89□□□□□ -0.03
LSM4-204ENST00000594828 A0A1B0GW15 77 aa14.89□□□□□ -0.03
LSM4-204ENST00000594828 SMAGPQ0VAQ4 97 aa14.89□□□□□ -0.03
LSM4-204ENST00000594828 CD164L2Q6UWJ8 174 aa14.89□□□□□ -0.03
LSM4-204ENST00000594828 PLAC8Q9NZF1 115 aa14.89□□□□□ -0.03
LSM4-204ENST00000594828 LINC00862A6NCI5 91 aa14.88□□□□□ -0.03
LSM4-204ENST00000594828 CSDC2Q9Y534 153 aaKnown RBP14.88□□□□□ -0.03
LSM4-204ENST00000594828 CKS2P33552 79 aa14.87□□□□□ -0.03
LSM4-204ENST00000594828 UBE2D4Q9Y2X8 147 aa14.87□□□□□ -0.03
LSM4-204ENST00000594828 LRP1Q07954 4544 aaKnown RBP14.86□□□□□ -0.03
LSM4-204ENST00000594828 IGKV2-24A0A0C4DH68 120 aa14.86□□□□□ -0.03
LSM4-204ENST00000594828 MAJINQ3KP22 176 aa14.86□□□□□ -0.03
LSM4-204ENST00000594828 C20orf78Q9BR46 151 aa14.86□□□□□ -0.03
LSM4-204ENST00000594828 TRBV24-1A0A075B6N3 115 aa14.85□□□□□ -0.03
LSM4-204ENST00000594828 C1orf196B1AJZ1 125 aa14.85□□□□□ -0.03
LSM4-204ENST00000594828 LINC00526Q96FQ7 95 aa14.85□□□□□ -0.03
LSM4-204ENST00000594828 PKHD1L1Q86WI1 4243 aa14.85□□□□□ -0.03
LSM4-204ENST00000594828 ZNF561-AS1K7EIQ3 104 aa14.84□□□□□ -0.03
LSM4-204ENST00000594828 S100A8P05109 93 aa14.84□□□□□ -0.03
LSM4-204ENST00000594828 MRPL54Q6P161 138 aaKnown RBP14.84□□□□□ -0.03
LSM4-204ENST00000594828 TMEM18Q96B42 140 aa14.84□□□□□ -0.03
LSM4-204ENST00000594828 F8W036 122 aa14.83□□□□□ -0.04
LSM4-204ENST00000594828 FAT3Q8TDW7 4589 aa14.82□□□□□ -0.04
LSM4-204ENST00000594828 TNFRSF6BO95407 300 aa14.82□□□□□ -0.04
LSM4-204ENST00000594828 RPL32P62910 135 aaKnown RBP14.82□□□□□ -0.04
LSM4-204ENST00000594828 HBBP68871 147 aa14.82□□□□□ -0.04
LSM4-204ENST00000594828 RNASE13Q5GAN3 156 aaKnown RBP14.82□□□□□ -0.04
LSM4-204ENST00000594828 STPG4Q8N801 248 aa14.82□□□□□ -0.04
LSM4-204ENST00000594828 C7orf33Q8WU49 177 aa14.82□□□□□ -0.04
LSM4-204ENST00000594828 CARD19Q96LW7 228 aa14.82□□□□□ -0.04
LSM4-204ENST00000594828 PKIGQ9Y2B9 76 aa14.82□□□□□ -0.04
LSM4-204ENST00000594828 A0A096LNI7 61 aa14.81□□□□□ -0.04
LSM4-204ENST00000594828 TCAPO15273 167 aa14.81□□□□□ -0.04
LSM4-204ENST00000594828 MALP21145 153 aa14.81□□□□□ -0.04
LSM4-204ENST00000594828 TIMM21Q9BVV7 248 aa14.81□□□□□ -0.04
LSM4-204ENST00000594828 TRAV13-1A0A0B4J241 112 aa14.8□□□□□ -0.04
LSM4-204ENST00000594828 D6R8Y8 96 aa14.8□□□□□ -0.04
LSM4-204ENST00000594828 PHOX2AO14813 284 aa14.8□□□□□ -0.04
LSM4-204ENST00000594828 SYCNQ0VAF6 134 aa14.8□□□□□ -0.04
LSM4-204ENST00000594828 SERTAD4-AS1Q5TG53 156 aa14.8□□□□□ -0.04
LSM4-204ENST00000594828 A0A1B0GXF2 115 aa14.79□□□□□ -0.04
LSM4-204ENST00000594828 COX7A2LO14548 114 aa14.79□□□□□ -0.04
LSM4-204ENST00000594828 Q6ZRU5 148 aa14.79□□□□□ -0.04
LSM4-204ENST00000594828 LINC00474Q9P2X8 69 aa14.79□□□□□ -0.04
LSM4-204ENST00000594828 Q6ZUT4 128 aa14.78□□□□□ -0.04
LSM4-204ENST00000594828 SMIM2Q9BVW6 85 aa14.78□□□□□ -0.04
LSM4-204ENST00000594828 PPBPP02775 128 aa14.77□□□□□ -0.05
LSM4-204ENST00000594828 IGLV4-69A0A075B6H9 119 aa14.76□□□□□ -0.05
LSM4-204ENST00000594828 NPYP01303 97 aa14.76□□□□□ -0.05
LSM4-204ENST00000594828 RPL39P62891 51 aaKnown RBP14.76□□□□□ -0.05
LSM4-204ENST00000594828 ATP5L2Q7Z4Y8 100 aa14.74□□□□□ -0.05
LSM4-204ENST00000594828 C5orf38Q86SI9 138 aa14.74□□□□□ -0.05
LSM4-204ENST00000594828 ORMDL3Q8N138 153 aa14.73□□□□□ -0.05
LSM4-204ENST00000594828 SPANXA1Q9NS26 97 aa14.73□□□□□ -0.05
LSM4-204ENST00000594828 APOMO95445 188 aa14.72□□□□□ -0.05
LSM4-204ENST00000594828 TMEM136Q6ZRR5 245 aa14.72□□□□□ -0.05
LSM4-204ENST00000594828 FAM104AQ969W3 186 aa14.71□□□□□ -0.05
LSM4-204ENST00000594828 CAMK2N2Q96S95 79 aa14.71□□□□□ -0.05
LSM4-204ENST00000594828 OPRPNQ99935 248 aaPredicted RBP14.71□□□□□ -0.05
LSM4-204ENST00000594828 LOC107984640A0A0U1RRK4 108 aa14.7□□□□□ -0.06
LSM4-204ENST00000594828 RAB14P61106 215 aa14.7□□□□□ -0.06
LSM4-204ENST00000594828 C2orf48Q96LS8 159 aa14.7□□□□□ -0.06
LSM4-204ENST00000594828 PRELID3AQ96N28 172 aa14.7□□□□□ -0.06
LSM4-204ENST00000594828 RAB5AP20339 215 aa14.69□□□□□ -0.06
LSM4-204ENST00000594828 PTTG1IPP53801 180 aa14.69□□□□□ -0.06
LSM4-204ENST00000594828 PRR3P79522 188 aaKnown RBP14.69□□□□□ -0.06
LSM4-204ENST00000594828 MRPS36P82909 103 aaKnown RBP14.69□□□□□ -0.06
LSM4-204ENST00000594828 PNRC1Q12796 327 aaPredicted RBP14.69□□□□□ -0.06
LSM4-204ENST00000594828 GAGE2BQ13066 116 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms