RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 PRSS3P2Q8NHM4 247 aa11.89□□□□□ -0.51
CCDC43-205ENST00000592333 CCL25O15444 150 aa11.88□□□□□ -0.51
CCDC43-205ENST00000592333 PPP1R17O96001 155 aa11.88□□□□□ -0.51
CCDC43-205ENST00000592333 SS18Q15532 418 aa11.88□□□□□ -0.51
CCDC43-205ENST00000592333 MAJINQ3KP22 176 aa11.88□□□□□ -0.51
CCDC43-205ENST00000592333 LCE2AQ5TA79 106 aaPredicted RBP11.88□□□□□ -0.51
CCDC43-205ENST00000592333 AKAP14Q86UN6 197 aa11.88□□□□□ -0.51
CCDC43-205ENST00000592333 HIGD1CA8MV81 97 aa11.87□□□□□ -0.51
CCDC43-205ENST00000592333 TSHBP01222 138 aa11.87□□□□□ -0.51
CCDC43-205ENST00000592333 SMAGPQ0VAQ4 97 aa11.87□□□□□ -0.51
CCDC43-205ENST00000592333 CD164L2Q6UWJ8 174 aa11.87□□□□□ -0.51
CCDC43-205ENST00000592333 ALKAL2Q6UX46 152 aa11.87□□□□□ -0.51
CCDC43-205ENST00000592333 LINC01551Q86U37 167 aa11.87□□□□□ -0.51
CCDC43-205ENST00000592333 STPG4Q8N801 248 aa11.87□□□□□ -0.51
CCDC43-205ENST00000592333 OSTCQ9NRP0 149 aa11.87□□□□□ -0.51
CCDC43-205ENST00000592333 CDC42SE2Q9NRR3 84 aa11.87□□□□□ -0.51
CCDC43-205ENST00000592333 SMIM7Q9BQ49 75 aa11.86□□□□□ -0.51
CCDC43-205ENST00000592333 CSDC2Q9Y534 153 aaKnown RBP11.86□□□□□ -0.51
CCDC43-205ENST00000592333 IGKV2-24A0A0C4DH68 120 aa11.85□□□□□ -0.51
CCDC43-205ENST00000592333 RAB4AP20338 218 aa11.85□□□□□ -0.51
CCDC43-205ENST00000592333 XCL1P47992 114 aa11.85□□□□□ -0.51
CCDC43-205ENST00000592333 ZNF664Q8N3J9 261 aa11.85□□□□□ -0.51
CCDC43-205ENST00000592333 EIF5A2Q9GZV4 153 aaKnown RBP11.85□□□□□ -0.51
CCDC43-205ENST00000592333 C7orf77A4D0Y5 90 aa11.84□□□□□ -0.51
CCDC43-205ENST00000592333 VCYO14598 125 aa11.84□□□□□ -0.51
CCDC43-205ENST00000592333 TMEM242Q9NWH2 141 aa11.84□□□□□ -0.51
CCDC43-205ENST00000592333 A0A096LNI7 61 aa11.83□□□□□ -0.52
CCDC43-205ENST00000592333 ZNF727A8MUV8 499 aa11.83□□□□□ -0.52
CCDC43-205ENST00000592333 ZNF561-AS1K7EIQ3 104 aa11.83□□□□□ -0.52
CCDC43-205ENST00000592333 CEBPGP53567 150 aa11.83□□□□□ -0.52
CCDC43-205ENST00000592333 PRR3P79522 188 aaKnown RBP11.83□□□□□ -0.52
CCDC43-205ENST00000592333 CARD19Q96LW7 228 aa11.83□□□□□ -0.52
CCDC43-205ENST00000592333 UBR4Q5T4S7 5183 aa11.82□□□□□ -0.52
CCDC43-205ENST00000592333 C1orf196B1AJZ1 125 aa11.82□□□□□ -0.52
CCDC43-205ENST00000592333 GAS8-AS1O95177 125 aa11.82□□□□□ -0.52
CCDC43-205ENST00000592333 RIGQ13278 110 aa11.82□□□□□ -0.52
CCDC43-205ENST00000592333 ISOC2Q96AB3 205 aa11.82□□□□□ -0.52
CCDC43-205ENST00000592333 LINC01600Q96MT4 127 aa11.82□□□□□ -0.52
CCDC43-205ENST00000592333 PPP1R2P9O14990 202 aa11.81□□□□□ -0.52
CCDC43-205ENST00000592333 SYCNQ0VAF6 134 aa11.81□□□□□ -0.52
CCDC43-205ENST00000592333 FAM74A3Q4VXF1 159 aa11.8□□□□□ -0.52
CCDC43-205ENST00000592333 SPINK6Q6UWN8 80 aa11.8□□□□□ -0.52
CCDC43-205ENST00000592333 AMN1Q8IY45 258 aa11.8□□□□□ -0.52
CCDC43-205ENST00000592333 KIR2DL4Q99706 377 aa11.8□□□□□ -0.52
CCDC43-205ENST00000592333 SRP19P09132 144 aaKnown RBP11.79□□□□□ -0.52
CCDC43-205ENST00000592333 FCER1GP30273 86 aa11.79□□□□□ -0.52
CCDC43-205ENST00000592333 SUMO2P61956 95 aaKnown RBP11.79□□□□□ -0.52
CCDC43-205ENST00000592333 NAT8BQ9UHF3 227 aa11.79□□□□□ -0.52
CCDC43-205ENST00000592333 V9GYV3 84 aa11.79□□□□□ -0.52
CCDC43-205ENST00000592333 LINC00862A6NCI5 91 aa11.78□□□□□ -0.52
CCDC43-205ENST00000592333 TCAPO15273 167 aa11.78□□□□□ -0.52
CCDC43-205ENST00000592333 CAMPP49913 170 aa11.78□□□□□ -0.52
CCDC43-205ENST00000592333 NUP35Q8NFH5 326 aa11.78□□□□□ -0.52
CCDC43-205ENST00000592333 TMEM18Q96B42 140 aa11.78□□□□□ -0.52
CCDC43-205ENST00000592333 TIMM21Q9BVV7 248 aa11.78□□□□□ -0.52
CCDC43-205ENST00000592333 Q6ZRP5 223 aa11.77□□□□□ -0.53
CCDC43-205ENST00000592333 UBE2D4Q9Y2X8 147 aa11.77□□□□□ -0.53
CCDC43-205ENST00000592333 LOC107984640A0A0U1RRK4 108 aa11.76□□□□□ -0.53
CCDC43-205ENST00000592333 A0A1B0GW15 77 aa11.76□□□□□ -0.53
CCDC43-205ENST00000592333 COX7A2LO14548 114 aa11.76□□□□□ -0.53
CCDC43-205ENST00000592333 MALP21145 153 aa11.76□□□□□ -0.53
CCDC43-205ENST00000592333 RPL32P62910 135 aaKnown RBP11.76□□□□□ -0.53
CCDC43-205ENST00000592333 TMEM241Q24JQ0 296 aa11.76□□□□□ -0.53
CCDC43-205ENST00000592333 REG3GQ6UW15 175 aa11.76□□□□□ -0.53
CCDC43-205ENST00000592333 NRACQ8N912 160 aa11.76□□□□□ -0.53
CCDC43-205ENST00000592333 C20orf78Q9BR46 151 aa11.76□□□□□ -0.53
CCDC43-205ENST00000592333 IGLV4-69A0A075B6H9 119 aa11.75□□□□□ -0.53
CCDC43-205ENST00000592333 TRBV24-1A0A075B6N3 115 aa11.75□□□□□ -0.53
CCDC43-205ENST00000592333 PTTG1IPP53801 180 aa11.75□□□□□ -0.53
CCDC43-205ENST00000592333 LINC00526Q96FQ7 95 aa11.75□□□□□ -0.53
CCDC43-205ENST00000592333 C2orf48Q96LS8 159 aa11.75□□□□□ -0.53
CCDC43-205ENST00000592333 A0A0J9YXV3 536 aa11.74□□□□□ -0.53
CCDC43-205ENST00000592333 APOMO95445 188 aa11.74□□□□□ -0.53
CCDC43-205ENST00000592333 SRSF9Q13242 221 aaKnown RBP eCLIP11.74□□□□□ -0.53
CCDC43-205ENST00000592333 FAM104BQ5XKR9 115 aa11.74□□□□□ -0.53
CCDC43-205ENST00000592333 SMIM27A0A1W2PRY6 76 aa11.72□□□□□ -0.53
CCDC43-205ENST00000592333 F8WDY8 70 aa11.72□□□□□ -0.53
CCDC43-205ENST00000592333 RPL23P62829 140 aaKnown RBP11.72□□□□□ -0.53
CCDC43-205ENST00000592333 RNF151Q2KHN1 245 aa11.72□□□□□ -0.53
CCDC43-205ENST00000592333 SMDT1Q9H4I9 107 aa11.72□□□□□ -0.53
CCDC43-205ENST00000592333 SMKR1H3BMG3 65 aa11.71□□□□□ -0.53
CCDC43-205ENST00000592333 MRPL51Q4U2R6 128 aaKnown RBP11.71□□□□□ -0.53
CCDC43-205ENST00000592333 CAMK2N2Q96S95 79 aa11.71□□□□□ -0.53
CCDC43-205ENST00000592333 NAT8Q9UHE5 227 aa11.71□□□□□ -0.53
CCDC43-205ENST00000592333 TNXBP22105 4242 aa11.7□□□□□ -0.54
CCDC43-205ENST00000592333 S100A8P05109 93 aa11.7□□□□□ -0.54
CCDC43-205ENST00000592333 KRTAP10-8P60410 259 aa11.7□□□□□ -0.54
CCDC43-205ENST00000592333 OR10D4PQ8NGN7 298 aa11.7□□□□□ -0.54
CCDC43-205ENST00000592333 TRAV13-1A0A0B4J241 112 aa11.69□□□□□ -0.54
CCDC43-205ENST00000592333 GAGE2BQ13066 116 aa11.69□□□□□ -0.54
CCDC43-205ENST00000592333 hCG_2014768A0A024R1R8 64 aa11.68□□□□□ -0.54
CCDC43-205ENST00000592333 CKS2P33552 79 aa11.68□□□□□ -0.54
CCDC43-205ENST00000592333 F8W036 122 aa11.67□□□□□ -0.54
CCDC43-205ENST00000592333 MRPS36P82909 103 aaKnown RBP11.67□□□□□ -0.54
CCDC43-205ENST00000592333 PEA15Q15121 130 aa11.67□□□□□ -0.54
CCDC43-205ENST00000592333 ADIRFQ15847 76 aa11.67□□□□□ -0.54
CCDC43-205ENST00000592333 SPANXA1Q9NS26 97 aa11.67□□□□□ -0.54
CCDC43-205ENST00000592333 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.66□□□□□ -0.54
CCDC43-205ENST00000592333 TNFRSF6BO95407 300 aa11.66□□□□□ -0.54
CCDC43-205ENST00000592333 PPBPP02775 128 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms