RNA–Protein interactions for RNA: ENST00000592013.1

TNFRSF11A-204, Transcript of TNF receptor superfamily member 11a, humanhuman

TSL 2

Gene TNFRSF11A, Length 575 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-204ENST00000592013 FCER1GP30273 86 aa12.56□□□□□ -0.4
TNFRSF11A-204ENST00000592013 COX6A2Q02221 97 aa12.56□□□□□ -0.4
TNFRSF11A-204ENST00000592013 HIGD2BQ4VC39 106 aa12.56□□□□□ -0.4
TNFRSF11A-204ENST00000592013 MRPL52Q86TS9 123 aaKnown RBP12.56□□□□□ -0.4
TNFRSF11A-204ENST00000592013 LINC00959A0A1B0GUT2 108 aa12.55□□□□□ -0.4
TNFRSF11A-204ENST00000592013 PPP1R2P9O14990 202 aa12.55□□□□□ -0.4
TNFRSF11A-204ENST00000592013 XCL1P47992 114 aa12.55□□□□□ -0.4
TNFRSF11A-204ENST00000592013 KIR2DL4Q99706 377 aa12.55□□□□□ -0.4
TNFRSF11A-204ENST00000592013 TCAPO15273 167 aa12.54□□□□□ -0.4
TNFRSF11A-204ENST00000592013 FOXI1Q12951 378 aa12.54□□□□□ -0.4
TNFRSF11A-204ENST00000592013 ISOC2Q96AB3 205 aa12.54□□□□□ -0.4
TNFRSF11A-204ENST00000592013 TMEM18Q96B42 140 aa12.54□□□□□ -0.4
TNFRSF11A-204ENST00000592013 TMEM242Q9NWH2 141 aa12.54□□□□□ -0.4
TNFRSF11A-204ENST00000592013 NAT8BQ9UHF3 227 aa12.54□□□□□ -0.4
TNFRSF11A-204ENST00000592013 hCG_2014768A0A024R1R8 64 aa12.53□□□□□ -0.4
TNFRSF11A-204ENST00000592013 ZNF561-AS1K7EIQ3 104 aa12.53□□□□□ -0.4
TNFRSF11A-204ENST00000592013 TSHBP01222 138 aa12.53□□□□□ -0.4
TNFRSF11A-204ENST00000592013 RAB4AP20338 218 aa12.53□□□□□ -0.4
TNFRSF11A-204ENST00000592013 TMEM241Q24JQ0 296 aa12.53□□□□□ -0.4
TNFRSF11A-204ENST00000592013 MAJINQ3KP22 176 aa12.53□□□□□ -0.4
TNFRSF11A-204ENST00000592013 CD164L2Q6UWJ8 174 aa12.53□□□□□ -0.4
TNFRSF11A-204ENST00000592013 ZNF664Q8N3J9 261 aa12.53□□□□□ -0.4
TNFRSF11A-204ENST00000592013 PLA2G2DQ9UNK4 145 aa12.53□□□□□ -0.4
TNFRSF11A-204ENST00000592013 A0A1B0GW15 77 aa12.52□□□□□ -0.41
TNFRSF11A-204ENST00000592013 C1orf196B1AJZ1 125 aa12.52□□□□□ -0.41
TNFRSF11A-204ENST00000592013 CHTF8P0CG12 524 aa12.52□□□□□ -0.41
TNFRSF11A-204ENST00000592013 POLR2KP53803 58 aaKnown RBP12.52□□□□□ -0.41
TNFRSF11A-204ENST00000592013 AMN1Q8IY45 258 aa12.51□□□□□ -0.41
TNFRSF11A-204ENST00000592013 CDC42SE2Q9NRR3 84 aa12.51□□□□□ -0.41
TNFRSF11A-204ENST00000592013 CSDC2Q9Y534 153 aaKnown RBP12.51□□□□□ -0.41
TNFRSF11A-204ENST00000592013 IGKV2-24A0A0C4DH68 120 aa12.5□□□□□ -0.41
TNFRSF11A-204ENST00000592013 S100A8P05109 93 aa12.5□□□□□ -0.41
TNFRSF11A-204ENST00000592013 SRP19P09132 144 aaKnown RBP12.5□□□□□ -0.41
TNFRSF11A-204ENST00000592013 MALP21145 153 aa12.5□□□□□ -0.41
TNFRSF11A-204ENST00000592013 STPG4Q8N801 248 aa12.5□□□□□ -0.41
TNFRSF11A-204ENST00000592013 CARD19Q96LW7 228 aa12.5□□□□□ -0.41
TNFRSF11A-204ENST00000592013 LINC00862A6NCI5 91 aa12.49□□□□□ -0.41
TNFRSF11A-204ENST00000592013 SUMO2P61956 95 aaKnown RBP12.49□□□□□ -0.41
TNFRSF11A-204ENST00000592013 PRSS3P2Q8NHM4 247 aa12.49□□□□□ -0.41
TNFRSF11A-204ENST00000592013 SMDT1Q9H4I9 107 aa12.49□□□□□ -0.41
TNFRSF11A-204ENST00000592013 NUP35Q8NFH5 326 aa12.48□□□□□ -0.41
TNFRSF11A-204ENST00000592013 V9GYV3 84 aa12.48□□□□□ -0.41
TNFRSF11A-204ENST00000592013 COX7A2LO14548 114 aa12.47□□□□□ -0.41
TNFRSF11A-204ENST00000592013 PHOX2AO14813 284 aa12.47□□□□□ -0.41
TNFRSF11A-204ENST00000592013 HNRNPA3P51991 378 aaKnown RBP12.47□□□□□ -0.41
TNFRSF11A-204ENST00000592013 SYCNQ0VAF6 134 aa12.47□□□□□ -0.41
TNFRSF11A-204ENST00000592013 PEA15Q15121 130 aa12.47□□□□□ -0.41
TNFRSF11A-204ENST00000592013 C20orf78Q9BR46 151 aa12.47□□□□□ -0.41
TNFRSF11A-204ENST00000592013 NAT8Q9UHE5 227 aa12.47□□□□□ -0.41
TNFRSF11A-204ENST00000592013 APOMO95445 188 aa12.46□□□□□ -0.41
TNFRSF11A-204ENST00000592013 ADIRFQ15847 76 aa12.46□□□□□ -0.41
TNFRSF11A-204ENST00000592013 F8W036 122 aa12.45□□□□□ -0.42
TNFRSF11A-204ENST00000592013 CAMPP49913 170 aa12.45□□□□□ -0.42
TNFRSF11A-204ENST00000592013 TIMM21Q9BVV7 248 aa12.45□□□□□ -0.42
TNFRSF11A-204ENST00000592013 FAM104BQ5XKR9 115 aa12.44□□□□□ -0.42
TNFRSF11A-204ENST00000592013 LRP1Q07954 4544 aaKnown RBP12.43□□□□□ -0.42
TNFRSF11A-204ENST00000592013 A0A096LNI7 61 aa12.43□□□□□ -0.42
TNFRSF11A-204ENST00000592013 SMIM27A0A1W2PRY6 76 aa12.43□□□□□ -0.42
TNFRSF11A-204ENST00000592013 GAS8-AS1O95177 125 aa12.43□□□□□ -0.42
TNFRSF11A-204ENST00000592013 CKS2P33552 79 aa12.43□□□□□ -0.42
TNFRSF11A-204ENST00000592013 RPL23P62829 140 aaKnown RBP12.43□□□□□ -0.42
TNFRSF11A-204ENST00000592013 UBE2D4Q9Y2X8 147 aa12.43□□□□□ -0.42
TNFRSF11A-204ENST00000592013 IGLV4-69A0A075B6H9 119 aa12.42□□□□□ -0.42
TNFRSF11A-204ENST00000592013 LOC107984640A0A0U1RRK4 108 aa12.42□□□□□ -0.42
TNFRSF11A-204ENST00000592013 RPL32P62910 135 aaKnown RBP12.42□□□□□ -0.42
TNFRSF11A-204ENST00000592013 PRR3P79522 188 aaKnown RBP12.42□□□□□ -0.42
TNFRSF11A-204ENST00000592013 NRACQ8N912 160 aa12.42□□□□□ -0.42
TNFRSF11A-204ENST00000592013 TRBV24-1A0A075B6N3 115 aa12.41□□□□□ -0.42
TNFRSF11A-204ENST00000592013 TRAV13-1A0A0B4J241 112 aa12.4□□□□□ -0.42
TNFRSF11A-204ENST00000592013 SMKR1H3BMG3 65 aa12.4□□□□□ -0.42
TNFRSF11A-204ENST00000592013 PPBPP02775 128 aa12.4□□□□□ -0.42
TNFRSF11A-204ENST00000592013 MRPL51Q4U2R6 128 aaKnown RBP12.4□□□□□ -0.42
TNFRSF11A-204ENST00000592013 REG3GQ6UW15 175 aa12.4□□□□□ -0.42
TNFRSF11A-204ENST00000592013 C2orf48Q96LS8 159 aa12.4□□□□□ -0.42
TNFRSF11A-204ENST00000592013 CAMK2N2Q96S95 79 aa12.4□□□□□ -0.42
TNFRSF11A-204ENST00000592013 F8WDY8 70 aa12.39□□□□□ -0.43
TNFRSF11A-204ENST00000592013 Q6ZRP5 223 aa12.39□□□□□ -0.43
TNFRSF11A-204ENST00000592013 FAT3Q8TDW7 4589 aa12.38□□□□□ -0.43
TNFRSF11A-204ENST00000592013 HBBP68871 147 aa12.38□□□□□ -0.43
TNFRSF11A-204ENST00000592013 SPINK6Q6UWN8 80 aa12.38□□□□□ -0.43
TNFRSF11A-204ENST00000592013 SPANXA1Q9NS26 97 aa12.38□□□□□ -0.43
TNFRSF11A-204ENST00000592013 PTTG1IPP53801 180 aa12.37□□□□□ -0.43
TNFRSF11A-204ENST00000592013 OR10D4PQ8NGN7 298 aa12.37□□□□□ -0.43
TNFRSF11A-204ENST00000592013 LINC00526Q96FQ7 95 aa12.37□□□□□ -0.43
TNFRSF11A-204ENST00000592013 TNFRSF6BO95407 300 aa12.36□□□□□ -0.43
TNFRSF11A-204ENST00000592013 MT1HL1P0DM35 61 aa12.36□□□□□ -0.43
TNFRSF11A-204ENST00000592013 HMCN2Q8NDA2 5059 aa12.35□□□□□ -0.43
TNFRSF11A-204ENST00000592013 RAB5AP20339 215 aa12.35□□□□□ -0.43
TNFRSF11A-204ENST00000592013 GAGE2BQ13066 116 aa12.35□□□□□ -0.43
TNFRSF11A-204ENST00000592013 RNF151Q2KHN1 245 aa12.35□□□□□ -0.43
TNFRSF11A-204ENST00000592013 LINC01600Q96MT4 127 aa12.35□□□□□ -0.43
TNFRSF11A-204ENST00000592013 SMIM2Q9BVW6 85 aa12.35□□□□□ -0.43
TNFRSF11A-204ENST00000592013 ATP5L2Q7Z4Y8 100 aa12.34□□□□□ -0.43
TNFRSF11A-204ENST00000592013 PKHD1L1Q86WI1 4243 aa12.34□□□□□ -0.43
TNFRSF11A-204ENST00000592013 MRPS36P82909 103 aaKnown RBP12.33□□□□□ -0.44
TNFRSF11A-204ENST00000592013 SPAG11BQ08648 103 aa12.33□□□□□ -0.44
TNFRSF11A-204ENST00000592013 Q6ZUT4 128 aa12.33□□□□□ -0.44
TNFRSF11A-204ENST00000592013 D6R8Y8 96 aa12.32□□□□□ -0.44
TNFRSF11A-204ENST00000592013 RNASE13Q5GAN3 156 aaKnown RBP12.32□□□□□ -0.44
TNFRSF11A-204ENST00000592013 MRPL54Q6P161 138 aaKnown RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 202.4 ms