RNA–Protein interactions for RNA: ENST00000590830.5

MBD3-208, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best)

Gene MBD3, Length 1,035 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-208ENST00000590830 TMEM218A2RU14 115 aa14.46□□□□□ -0.09
MBD3-208ENST00000590830 FCER1GP30273 86 aa14.46□□□□□ -0.09
MBD3-208ENST00000590830 Q5VSD8 79 aa14.46□□□□□ -0.09
MBD3-208ENST00000590830 UQCC3Q6UW78 93 aa14.46□□□□□ -0.09
MBD3-208ENST00000590830 CLRN3Q8NCR9 226 aa14.46□□□□□ -0.09
MBD3-208ENST00000590830 TMEM101Q96IK0 257 aa14.46□□□□□ -0.09
MBD3-208ENST00000590830 BTF3L4Q96K17 158 aa14.46□□□□□ -0.09
MBD3-208ENST00000590830 NPYP01303 97 aa14.45□□□□□ -0.1
MBD3-208ENST00000590830 SLPIP03973 132 aa14.45□□□□□ -0.1
MBD3-208ENST00000590830 RPL32P62910 135 aaKnown RBP14.45□□□□□ -0.1
MBD3-208ENST00000590830 C9orf163Q8N9P6 203 aa14.44□□□□□ -0.1
MBD3-208ENST00000590830 KIR2DL4Q99706 377 aa14.44□□□□□ -0.1
MBD3-208ENST00000590830 LINC00959A0A1B0GUT2 108 aa14.43□□□□□ -0.1
MBD3-208ENST00000590830 hDV102S1A0JD36 115 aa14.43□□□□□ -0.1
MBD3-208ENST00000590830 FOXI1Q12951 378 aa14.43□□□□□ -0.1
MBD3-208ENST00000590830 ZNF664Q8N3J9 261 aa14.43□□□□□ -0.1
MBD3-208ENST00000590830 C15orf56Q8N910 161 aa14.43□□□□□ -0.1
MBD3-208ENST00000590830 PPBPP02775 128 aa14.42□□□□□ -0.1
MBD3-208ENST00000590830 SCXQ7RTU7 201 aa14.42□□□□□ -0.1
MBD3-208ENST00000590830 SMIM2Q9BVW6 85 aa14.42□□□□□ -0.1
MBD3-208ENST00000590830 UBE2D4Q9Y2X8 147 aa14.42□□□□□ -0.1
MBD3-208ENST00000590830 TMEM136Q6ZRR5 245 aa14.41□□□□□ -0.1
MBD3-208ENST00000590830 CHAC1Q9BUX1 264 aa14.41□□□□□ -0.1
MBD3-208ENST00000590830 PHOX2AO14813 284 aa14.4□□□□□ -0.1
MBD3-208ENST00000590830 CNBPP62633 177 aaKnown RBP14.4□□□□□ -0.1
MBD3-208ENST00000590830 ORMDL3Q8N138 153 aa14.4□□□□□ -0.1
MBD3-208ENST00000590830 CSDC2Q9Y534 153 aaKnown RBP14.4□□□□□ -0.1
MBD3-208ENST00000590830 CCL25O15444 150 aa14.39□□□□□ -0.11
MBD3-208ENST00000590830 XCL1P47992 114 aa14.39□□□□□ -0.11
MBD3-208ENST00000590830 SDIM1Q6ZPB5 146 aa14.39□□□□□ -0.11
MBD3-208ENST00000590830 COMMD7Q86VX2 200 aa14.39□□□□□ -0.11
MBD3-208ENST00000590830 CIRBP-AS1Q8TBR5 109 aa14.39□□□□□ -0.11
MBD3-208ENST00000590830 PRELID3AQ96N28 172 aa14.39□□□□□ -0.11
MBD3-208ENST00000590830 FAM229AH3BQW9 127 aa14.38□□□□□ -0.11
MBD3-208ENST00000590830 TCAPO15273 167 aa14.38□□□□□ -0.11
MBD3-208ENST00000590830 FAM104AQ969W3 186 aa14.38□□□□□ -0.11
MBD3-208ENST00000590830 SRRM2Q9UQ35 2752 aaKnown RBP14.38□□□□□ -0.11
MBD3-208ENST00000590830 RPL39P62891 51 aaKnown RBP14.37□□□□□ -0.11
MBD3-208ENST00000590830 RNASE13Q5GAN3 156 aaKnown RBP14.37□□□□□ -0.11
MBD3-208ENST00000590830 TIMM21Q9BVV7 248 aa14.37□□□□□ -0.11
MBD3-208ENST00000590830 SEC11CQ9BY50 192 aa14.37□□□□□ -0.11
MBD3-208ENST00000590830 PANO1I0J062 215 aa14.36□□□□□ -0.11
MBD3-208ENST00000590830 HIGD2BQ4VC39 106 aa14.36□□□□□ -0.11
MBD3-208ENST00000590830 CFAP161Q6P656 301 aa14.36□□□□□ -0.11
MBD3-208ENST00000590830 IMMP2LQ96T52 175 aa14.36□□□□□ -0.11
MBD3-208ENST00000590830 INAFM2P0DMQ5 153 aa14.35□□□□□ -0.11
MBD3-208ENST00000590830 SS18Q15532 418 aa14.35□□□□□ -0.11
MBD3-208ENST00000590830 Q6ZUT4 128 aa14.35□□□□□ -0.11
MBD3-208ENST00000590830 PRSS47A8MTI9 375 aa14.34□□□□□ -0.11
MBD3-208ENST00000590830 LINC00528Q8N1L1 170 aa14.34□□□□□ -0.11
MBD3-208ENST00000590830 CTDSP1Q9GZU7 261 aa14.34□□□□□ -0.11
MBD3-208ENST00000590830 AP5S1Q9NUS5 200 aa14.34□□□□□ -0.11
MBD3-208ENST00000590830 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP14.34□□□□□ -0.11
MBD3-208ENST00000590830 C10orf91Q5T1B1 145 aa14.33□□□□□ -0.12
MBD3-208ENST00000590830 CD164L2Q6UWJ8 174 aa14.33□□□□□ -0.12
MBD3-208ENST00000590830 TMEM18Q96B42 140 aa14.33□□□□□ -0.12
MBD3-208ENST00000590830 OPRPNQ99935 248 aaPredicted RBP14.33□□□□□ -0.12
MBD3-208ENST00000590830 GVQW2A0A096LPI5 108 aaPredicted RBP14.32□□□□□ -0.12
MBD3-208ENST00000590830 LOC389332A0A1B0GUA5 103 aa14.32□□□□□ -0.12
MBD3-208ENST00000590830 SMAGPQ0VAQ4 97 aa14.32□□□□□ -0.12
MBD3-208ENST00000590830 LAMTOR2Q9Y2Q5 125 aa14.31□□□□□ -0.12
MBD3-208ENST00000590830 TRAV13-1A0A0B4J241 112 aa14.3□□□□□ -0.12
MBD3-208ENST00000590830 C1orf196B1AJZ1 125 aa14.3□□□□□ -0.12
MBD3-208ENST00000590830 IGHV3-64A0A075B6Q5 118 aa14.29□□□□□ -0.12
MBD3-208ENST00000590830 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.29□□□□□ -0.12
MBD3-208ENST00000590830 LINC00526Q96FQ7 95 aa14.29□□□□□ -0.12
MBD3-208ENST00000590830 IGHV1-58A0A0C4DH39 117 aa14.28□□□□□ -0.12
MBD3-208ENST00000590830 RAB5AP20339 215 aa14.28□□□□□ -0.12
MBD3-208ENST00000590830 MAP1LC3AQ9H492 121 aa14.28□□□□□ -0.12
MBD3-208ENST00000590830 SPANXA1Q9NS26 97 aa14.28□□□□□ -0.12
MBD3-208ENST00000590830 CIRBPQ14011 172 aaKnown RBP14.27□□□□□ -0.13
MBD3-208ENST00000590830 Q8N8P6 123 aa14.27□□□□□ -0.13
MBD3-208ENST00000590830 CARHSP1Q9Y2V2 147 aaKnown RBP14.27□□□□□ -0.13
MBD3-208ENST00000590830 MYCBP2O75592 4640 aa14.27□□□□□ -0.13
MBD3-208ENST00000590830 TRAV9-1A0A075B6T8 112 aa14.26□□□□□ -0.13
MBD3-208ENST00000590830 KRTAP10-4P60372 401 aaPredicted RBP14.26□□□□□ -0.13
MBD3-208ENST00000590830 MRPS36P82909 103 aaKnown RBP14.26□□□□□ -0.13
MBD3-208ENST00000590830 CHTF8P0CG12 524 aa14.25□□□□□ -0.13
MBD3-208ENST00000590830 KIAA1644Q3SXP7 199 aa14.25□□□□□ -0.13
MBD3-208ENST00000590830 COX7A2LO14548 114 aa14.23□□□□□ -0.13
MBD3-208ENST00000590830 PLA2G1BP04054 148 aaKnown RBP14.23□□□□□ -0.13
MBD3-208ENST00000590830 COX6A2Q02221 97 aa14.23□□□□□ -0.13
MBD3-208ENST00000590830 C5orf38Q86SI9 138 aa14.23□□□□□ -0.13
MBD3-208ENST00000590830 PRSS3P2Q8NHM4 247 aa14.23□□□□□ -0.13
MBD3-208ENST00000590830 PYGO1Q9Y3Y4 419 aa14.23□□□□□ -0.13
MBD3-208ENST00000590830 FLG2Q5D862 2391 aaPredicted RBP14.22□□□□□ -0.13
MBD3-208ENST00000590830 IGLV4-3A0A075B6K6 122 aa14.21□□□□□ -0.13
MBD3-208ENST00000590830 IFI27P40305 119 aaPredicted RBP14.21□□□□□ -0.13
MBD3-208ENST00000590830 SPACA4Q8TDM5 124 aa14.21□□□□□ -0.13
MBD3-208ENST00000590830 MALP21145 153 aa14.2□□□□□ -0.14
MBD3-208ENST00000590830 S100PP25815 95 aa14.2□□□□□ -0.14
MBD3-208ENST00000590830 RHEBQ15382 184 aa14.2□□□□□ -0.14
MBD3-208ENST00000590830 GNB1LQ9BYB4 327 aa14.2□□□□□ -0.14
MBD3-208ENST00000590830 RPS10P5Q9NQ39 176 aa14.2□□□□□ -0.14
MBD3-208ENST00000590830 IGLV4-69A0A075B6H9 119 aa14.18□□□□□ -0.14
MBD3-208ENST00000590830 A0A087WYN8 130 aa14.18□□□□□ -0.14
MBD3-208ENST00000590830 IGHV3OR16-9A0A0B4J2B5 98 aa14.18□□□□□ -0.14
MBD3-208ENST00000590830 IFITM10A6NMD0 228 aa14.18□□□□□ -0.14
MBD3-208ENST00000590830 ZNF561-AS1K7EIQ3 104 aa14.18□□□□□ -0.14
MBD3-208ENST00000590830 C2orf66Q6UXQ4 117 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms