RNA–Protein interactions for RNA: ENST00000590541.1

RETREG3-210, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 409 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-210ENST00000590541 A0A1B0GW15 77 aa10.93□□□□□ -0.66
RETREG3-210ENST00000590541 PHOX2AO14813 284 aa10.93□□□□□ -0.66
RETREG3-210ENST00000590541 CHTF8P0CG12 524 aa10.93□□□□□ -0.66
RETREG3-210ENST00000590541 POLR2KP53803 58 aaKnown RBP10.93□□□□□ -0.66
RETREG3-210ENST00000590541 ADIRFQ15847 76 aa10.93□□□□□ -0.66
RETREG3-210ENST00000590541 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.92□□□□□ -0.66
RETREG3-210ENST00000590541 IGKV2-29A2NJV5 120 aaPredicted RBP10.92□□□□□ -0.66
RETREG3-210ENST00000590541 ESDP10768 282 aa10.92□□□□□ -0.66
RETREG3-210ENST00000590541 AMN1Q8IY45 258 aa10.92□□□□□ -0.66
RETREG3-210ENST00000590541 OR5A1Q8NGJ0 315 aa10.92□□□□□ -0.66
RETREG3-210ENST00000590541 SPACA4Q8TDM5 124 aa10.92□□□□□ -0.66
RETREG3-210ENST00000590541 DPH3Q96FX2 82 aa10.92□□□□□ -0.66
RETREG3-210ENST00000590541 SMIM27A0A1W2PRY6 76 aa10.91□□□□□ -0.66
RETREG3-210ENST00000590541 VCYO14598 125 aa10.91□□□□□ -0.66
RETREG3-210ENST00000590541 TSHBP01222 138 aa10.91□□□□□ -0.66
RETREG3-210ENST00000590541 SMAGPQ0VAQ4 97 aa10.91□□□□□ -0.66
RETREG3-210ENST00000590541 MRPL52Q86TS9 123 aaKnown RBP10.91□□□□□ -0.66
RETREG3-210ENST00000590541 A0A0J9YXV3 536 aa10.9□□□□□ -0.66
RETREG3-210ENST00000590541 GAGE12HA6NDE8 117 aa10.9□□□□□ -0.66
RETREG3-210ENST00000590541 C9JQL5 133 aa10.9□□□□□ -0.66
RETREG3-210ENST00000590541 PPP1R2P9O14990 202 aa10.9□□□□□ -0.66
RETREG3-210ENST00000590541 SLPIP03973 132 aa10.9□□□□□ -0.66
RETREG3-210ENST00000590541 KRTAP10-8P60410 259 aa10.9□□□□□ -0.66
RETREG3-210ENST00000590541 CHCHD10Q8WYQ3 142 aaPredicted RBP10.9□□□□□ -0.66
RETREG3-210ENST00000590541 PLAC8Q9NZF1 115 aa10.9□□□□□ -0.66
RETREG3-210ENST00000590541 IGHV3-64A0A075B6Q5 118 aa10.89□□□□□ -0.67
RETREG3-210ENST00000590541 IGKV3OR2-268A0A0C4DH90 116 aa10.89□□□□□ -0.67
RETREG3-210ENST00000590541 C7orf77A4D0Y5 90 aa10.89□□□□□ -0.67
RETREG3-210ENST00000590541 LINC00862A6NCI5 91 aa10.89□□□□□ -0.67
RETREG3-210ENST00000590541 RPS10P46783 165 aaKnown RBP10.89□□□□□ -0.67
RETREG3-210ENST00000590541 TMEM242Q9NWH2 141 aa10.89□□□□□ -0.67
RETREG3-210ENST00000590541 LPAP08519 4548 aa10.88□□□□□ -0.67
RETREG3-210ENST00000590541 S100A8P05109 93 aa10.88□□□□□ -0.67
RETREG3-210ENST00000590541 SUMO2P61956 95 aaKnown RBP10.88□□□□□ -0.67
RETREG3-210ENST00000590541 SRSF3P84103 164 aaKnown RBP10.88□□□□□ -0.67
RETREG3-210ENST00000590541 FAM104BQ5XKR9 115 aa10.88□□□□□ -0.67
RETREG3-210ENST00000590541 KIR2DL4Q99706 377 aa10.88□□□□□ -0.67
RETREG3-210ENST00000590541 TCAPO15273 167 aa10.87□□□□□ -0.67
RETREG3-210ENST00000590541 FCER1GP30273 86 aa10.87□□□□□ -0.67
RETREG3-210ENST00000590541 C15orf56Q8N910 161 aa10.87□□□□□ -0.67
RETREG3-210ENST00000590541 C7orf33Q8WU49 177 aa10.87□□□□□ -0.67
RETREG3-210ENST00000590541 CSDC2Q9Y534 153 aaKnown RBP10.87□□□□□ -0.67
RETREG3-210ENST00000590541 LINC00959A0A1B0GUT2 108 aa10.86□□□□□ -0.67
RETREG3-210ENST00000590541 PRR3P79522 188 aaKnown RBP10.86□□□□□ -0.67
RETREG3-210ENST00000590541 SS18Q15532 418 aa10.86□□□□□ -0.67
RETREG3-210ENST00000590541 NRACQ8N912 160 aa10.86□□□□□ -0.67
RETREG3-210ENST00000590541 C20orf78Q9BR46 151 aa10.86□□□□□ -0.67
RETREG3-210ENST00000590541 CDC42SE2Q9NRR3 84 aa10.86□□□□□ -0.67
RETREG3-210ENST00000590541 TRBV24-1A0A075B6N3 115 aa10.85□□□□□ -0.67
RETREG3-210ENST00000590541 F8W036 122 aa10.85□□□□□ -0.67
RETREG3-210ENST00000590541 CCL25O15444 150 aa10.85□□□□□ -0.67
RETREG3-210ENST00000590541 RPL32P62910 135 aaKnown RBP10.85□□□□□ -0.67
RETREG3-210ENST00000590541 ZNF664Q8N3J9 261 aa10.85□□□□□ -0.67
RETREG3-210ENST00000590541 TMEM18Q96B42 140 aa10.85□□□□□ -0.67
RETREG3-210ENST00000590541 GVQW2A0A096LPI5 108 aaPredicted RBP10.84□□□□□ -0.67
RETREG3-210ENST00000590541 SMKR1H3BMG3 65 aa10.84□□□□□ -0.67
RETREG3-210ENST00000590541 CAMPP49913 170 aa10.84□□□□□ -0.67
RETREG3-210ENST00000590541 FOXI1Q12951 378 aa10.84□□□□□ -0.67
RETREG3-210ENST00000590541 MRPL51Q4U2R6 128 aaKnown RBP10.84□□□□□ -0.67
RETREG3-210ENST00000590541 PKIGQ9Y2B9 76 aa10.84□□□□□ -0.67
RETREG3-210ENST00000590541 CKS2P33552 79 aa10.83□□□□□ -0.68
RETREG3-210ENST00000590541 HBBP68871 147 aa10.83□□□□□ -0.68
RETREG3-210ENST00000590541 IGHV1-58A0A0C4DH39 117 aa10.82□□□□□ -0.68
RETREG3-210ENST00000590541 PPBPP02775 128 aa10.82□□□□□ -0.68
RETREG3-210ENST00000590541 XCL1P47992 114 aa10.82□□□□□ -0.68
RETREG3-210ENST00000590541 CD164L2Q6UWJ8 174 aa10.82□□□□□ -0.68
RETREG3-210ENST00000590541 TIMM21Q9BVV7 248 aa10.82□□□□□ -0.68
RETREG3-210ENST00000590541 C1orf196B1AJZ1 125 aa10.81□□□□□ -0.68
RETREG3-210ENST00000590541 RAB14P61106 215 aa10.81□□□□□ -0.68
RETREG3-210ENST00000590541 PNRC1Q12796 327 aaPredicted RBP10.81□□□□□ -0.68
RETREG3-210ENST00000590541 HIGD2BQ4VC39 106 aa10.81□□□□□ -0.68
RETREG3-210ENST00000590541 ATP5L2Q7Z4Y8 100 aa10.81□□□□□ -0.68
RETREG3-210ENST00000590541 A0A1B0GXF2 115 aa10.8□□□□□ -0.68
RETREG3-210ENST00000590541 COX6A2Q02221 97 aa10.8□□□□□ -0.68
RETREG3-210ENST00000590541 UBE2D4Q9Y2X8 147 aa10.8□□□□□ -0.68
RETREG3-210ENST00000590541 TNFRSF6BO95407 300 aa10.79□□□□□ -0.68
RETREG3-210ENST00000590541 MRPL54Q6P161 138 aaKnown RBP10.79□□□□□ -0.68
RETREG3-210ENST00000590541 REG3GQ6UW15 175 aa10.79□□□□□ -0.68
RETREG3-210ENST00000590541 SPINK6Q6UWN8 80 aa10.79□□□□□ -0.68
RETREG3-210ENST00000590541 KRTAP9-2Q9BYQ4 174 aa10.79□□□□□ -0.68
RETREG3-210ENST00000590541 MAJINQ3KP22 176 aa10.78□□□□□ -0.68
RETREG3-210ENST00000590541 PRSS3P2Q8NHM4 247 aa10.78□□□□□ -0.68
RETREG3-210ENST00000590541 D6R8Y8 96 aa10.77□□□□□ -0.69
RETREG3-210ENST00000590541 ZNF561-AS1K7EIQ3 104 aa10.77□□□□□ -0.69
RETREG3-210ENST00000590541 SMIM2Q9BVW6 85 aa10.77□□□□□ -0.69
RETREG3-210ENST00000590541 LINC00474Q9P2X8 69 aa10.77□□□□□ -0.69
RETREG3-210ENST00000590541 IGKV2-24A0A0C4DH68 120 aa10.76□□□□□ -0.69
RETREG3-210ENST00000590541 MT-ND4LP03901 98 aa10.76□□□□□ -0.69
RETREG3-210ENST00000590541 SRSF9Q13242 221 aaKnown RBP eCLIP10.76□□□□□ -0.69
RETREG3-210ENST00000590541 ORMDL3Q8N138 153 aa10.76□□□□□ -0.69
RETREG3-210ENST00000590541 STPG4Q8N801 248 aa10.76□□□□□ -0.69
RETREG3-210ENST00000590541 ANAPC16Q96DE5 110 aa10.76□□□□□ -0.69
RETREG3-210ENST00000590541 COX7A2LO14548 114 aa10.75□□□□□ -0.69
RETREG3-210ENST00000590541 SPANXA1Q9NS26 97 aa10.75□□□□□ -0.69
RETREG3-210ENST00000590541 MALP21145 153 aa10.74□□□□□ -0.69
RETREG3-210ENST00000590541 CARD19Q96LW7 228 aa10.74□□□□□ -0.69
RETREG3-210ENST00000590541 LAMTOR2Q9Y2Q5 125 aa10.74□□□□□ -0.69
RETREG3-210ENST00000590541 NPYP01303 97 aa10.73□□□□□ -0.69
RETREG3-210ENST00000590541 SYCNQ0VAF6 134 aa10.73□□□□□ -0.69
RETREG3-210ENST00000590541 TMEM136Q6ZRR5 245 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 139.5 ms