RNA–Protein interactions for RNA: ENST00000590035.5

RETREG3-209, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 518 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-209ENST00000590035 SRSF9Q13242 221 aaKnown RBP eCLIP6.47□□□□□ -1.37
RETREG3-209ENST00000590035 MAJINQ3KP22 176 aa6.47□□□□□ -1.37
RETREG3-209ENST00000590035 CT83Q5H943 113 aa6.47□□□□□ -1.37
RETREG3-209ENST00000590035 MRPL52Q86TS9 123 aaKnown RBP6.47□□□□□ -1.37
RETREG3-209ENST00000590035 STPG4Q8N801 248 aa6.47□□□□□ -1.37
RETREG3-209ENST00000590035 IGKV2-24A0A0C4DH68 120 aa6.46□□□□□ -1.38
RETREG3-209ENST00000590035 IGKV3OR2-268A0A0C4DH90 116 aa6.46□□□□□ -1.38
RETREG3-209ENST00000590035 A0A0J9YXV3 536 aa6.46□□□□□ -1.38
RETREG3-209ENST00000590035 TRBV27A0A0K0K1C4 114 aa6.46□□□□□ -1.38
RETREG3-209ENST00000590035 I3L3M4 83 aa6.46□□□□□ -1.38
RETREG3-209ENST00000590035 AMMECR1LQ6DCA0 310 aa6.46□□□□□ -1.38
RETREG3-209ENST00000590035 KRTAP4-8Q9BYQ9 185 aa6.46□□□□□ -1.38
RETREG3-209ENST00000590035 IGHV1-58A0A0C4DH39 117 aa6.45□□□□□ -1.38
RETREG3-209ENST00000590035 CCL25O15444 150 aa6.45□□□□□ -1.38
RETREG3-209ENST00000590035 ODF1Q14990 250 aa6.45□□□□□ -1.38
RETREG3-209ENST00000590035 RNASEKQ6P5S7 137 aaKnown RBP6.45□□□□□ -1.38
RETREG3-209ENST00000590035 DPH3Q96FX2 82 aa6.45□□□□□ -1.38
RETREG3-209ENST00000590035 CDC42SE2Q9NRR3 84 aa6.45□□□□□ -1.38
RETREG3-209ENST00000590035 LINC00474Q9P2X8 69 aa6.45□□□□□ -1.38
RETREG3-209ENST00000590035 A8MWL6 223 aa6.44□□□□□ -1.38
RETREG3-209ENST00000590035 GATCO43716 136 aaKnown RBP6.44□□□□□ -1.38
RETREG3-209ENST00000590035 XCL1P47992 114 aa6.44□□□□□ -1.38
RETREG3-209ENST00000590035 CD164L2Q6UWJ8 174 aa6.44□□□□□ -1.38
RETREG3-209ENST00000590035 SPINK6Q6UWN8 80 aa6.44□□□□□ -1.38
RETREG3-209ENST00000590035 LINC00526Q96FQ7 95 aa6.44□□□□□ -1.38
RETREG3-209ENST00000590035 TMEM191AQ9H0A3 160 aa6.44□□□□□ -1.38
RETREG3-209ENST00000590035 SMIM15Q7Z3B0 74 aa6.43□□□□□ -1.38
RETREG3-209ENST00000590035 CARD19Q96LW7 228 aa6.43□□□□□ -1.38
RETREG3-209ENST00000590035 TMEM242Q9NWH2 141 aa6.43□□□□□ -1.38
RETREG3-209ENST00000590035 CSDC2Q9Y534 153 aaKnown RBP6.43□□□□□ -1.38
RETREG3-209ENST00000590035 RAB4AP20338 218 aa6.42□□□□□ -1.38
RETREG3-209ENST00000590035 PMCHP20382 165 aa6.42□□□□□ -1.38
RETREG3-209ENST00000590035 PTTG1IPP53801 180 aa6.42□□□□□ -1.38
RETREG3-209ENST00000590035 LINC01551Q86U37 167 aa6.42□□□□□ -1.38
RETREG3-209ENST00000590035 TSKUQ8WUA8 353 aa6.42□□□□□ -1.38
RETREG3-209ENST00000590035 MRAP2Q96G30 205 aa6.42□□□□□ -1.38
RETREG3-209ENST00000590035 ST20Q9HBF5 79 aa6.42□□□□□ -1.38
RETREG3-209ENST00000590035 PKIGQ9Y2B9 76 aa6.42□□□□□ -1.38
RETREG3-209ENST00000590035 LPAP08519 4548 aa6.41□□□□□ -1.38
RETREG3-209ENST00000590035 A0A1B0GUT8 65 aa6.41□□□□□ -1.38
RETREG3-209ENST00000590035 HIGD1CA8MV81 97 aa6.41□□□□□ -1.38
RETREG3-209ENST00000590035 SYCNQ0VAF6 134 aa6.41□□□□□ -1.38
RETREG3-209ENST00000590035 ZNF664Q8N3J9 261 aa6.41□□□□□ -1.38
RETREG3-209ENST00000590035 NRACQ8N912 160 aa6.41□□□□□ -1.38
RETREG3-209ENST00000590035 FAM104AQ969W3 186 aa6.41□□□□□ -1.38
RETREG3-209ENST00000590035 TMEM101Q96IK0 257 aa6.41□□□□□ -1.38
RETREG3-209ENST00000590035 BTF3L4Q96K17 158 aa6.41□□□□□ -1.38
RETREG3-209ENST00000590035 OSTCQ9NRP0 149 aa6.41□□□□□ -1.38
RETREG3-209ENST00000590035 A0A1W2PNN7 141 aa6.4□□□□□ -1.38
RETREG3-209ENST00000590035 C7orf77A4D0Y5 90 aa6.4□□□□□ -1.38
RETREG3-209ENST00000590035 CAMPP49913 170 aa6.4□□□□□ -1.38
RETREG3-209ENST00000590035 BLOC1S1P78537 153 aa6.4□□□□□ -1.38
RETREG3-209ENST00000590035 SS18Q15532 418 aa6.4□□□□□ -1.38
RETREG3-209ENST00000590035 Q6ZRP5 223 aa6.4□□□□□ -1.38
RETREG3-209ENST00000590035 AMN1Q8IY45 258 aa6.4□□□□□ -1.38
RETREG3-209ENST00000590035 NUP35Q8NFH5 326 aa6.4□□□□□ -1.38
RETREG3-209ENST00000590035 UBE2D4Q9Y2X8 147 aa6.4□□□□□ -1.38
RETREG3-209ENST00000590035 IGLV4-69A0A075B6H9 119 aa6.39□□□□□ -1.39
RETREG3-209ENST00000590035 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.39□□□□□ -1.39
RETREG3-209ENST00000590035 REG3GQ6UW15 175 aa6.39□□□□□ -1.39
RETREG3-209ENST00000590035 ALKAL2Q6UX46 152 aa6.39□□□□□ -1.39
RETREG3-209ENST00000590035 V9GYV3 84 aa6.39□□□□□ -1.39
RETREG3-209ENST00000590035 LOC107984640A0A0U1RRK4 108 aa6.38□□□□□ -1.39
RETREG3-209ENST00000590035 C1orf196B1AJZ1 125 aa6.38□□□□□ -1.39
RETREG3-209ENST00000590035 SMKR1H3BMG3 65 aa6.38□□□□□ -1.39
RETREG3-209ENST00000590035 ZNF561-AS1K7EIQ3 104 aa6.38□□□□□ -1.39
RETREG3-209ENST00000590035 VCYO14598 125 aa6.38□□□□□ -1.39
RETREG3-209ENST00000590035 C2orf48Q96LS8 159 aa6.38□□□□□ -1.39
RETREG3-209ENST00000590035 SMIM7Q9BQ49 75 aa6.38□□□□□ -1.39
RETREG3-209ENST00000590035 TIMM21Q9BVV7 248 aa6.38□□□□□ -1.39
RETREG3-209ENST00000590035 COX7A2LO14548 114 aa6.37□□□□□ -1.39
RETREG3-209ENST00000590035 SRP19P09132 144 aaKnown RBP6.37□□□□□ -1.39
RETREG3-209ENST00000590035 SUMO2P61956 95 aaKnown RBP6.37□□□□□ -1.39
RETREG3-209ENST00000590035 RPL32P62910 135 aaKnown RBP6.37□□□□□ -1.39
RETREG3-209ENST00000590035 TRBV24-1A0A075B6N3 115 aa6.36□□□□□ -1.39
RETREG3-209ENST00000590035 APOMO95445 188 aa6.36□□□□□ -1.39
RETREG3-209ENST00000590035 RNF151Q2KHN1 245 aa6.36□□□□□ -1.39
RETREG3-209ENST00000590035 Q6ZUT4 128 aa6.36□□□□□ -1.39
RETREG3-209ENST00000590035 ISOC2Q96AB3 205 aa6.36□□□□□ -1.39
RETREG3-209ENST00000590035 BORCS7Q96B45 105 aa6.36□□□□□ -1.39
RETREG3-209ENST00000590035 PSORS1C2Q9UIG4 136 aa6.36□□□□□ -1.39
RETREG3-209ENST00000590035 IGHV3OR16-9A0A0B4J2B5 98 aa6.35□□□□□ -1.39
RETREG3-209ENST00000590035 PPP1R17O96001 155 aa6.35□□□□□ -1.39
RETREG3-209ENST00000590035 GAGE2BQ13066 116 aa6.35□□□□□ -1.39
RETREG3-209ENST00000590035 C9orf116Q5BN46 136 aaPredicted RBP6.35□□□□□ -1.39
RETREG3-209ENST00000590035 RNASE13Q5GAN3 156 aaKnown RBP6.35□□□□□ -1.39
RETREG3-209ENST00000590035 FAM104BQ5XKR9 115 aa6.35□□□□□ -1.39
RETREG3-209ENST00000590035 SMIM27A0A1W2PRY6 76 aa6.34□□□□□ -1.39
RETREG3-209ENST00000590035 ZNF727A8MUV8 499 aa6.34□□□□□ -1.39
RETREG3-209ENST00000590035 PPP1R2P9O14990 202 aa6.34□□□□□ -1.39
RETREG3-209ENST00000590035 RIGQ13278 110 aa6.34□□□□□ -1.39
RETREG3-209ENST00000590035 MRPL51Q4U2R6 128 aaKnown RBP6.34□□□□□ -1.39
RETREG3-209ENST00000590035 AKAP14Q86UN6 197 aa6.34□□□□□ -1.39
RETREG3-209ENST00000590035 KRTAP11-1Q8IUC1 163 aa6.34□□□□□ -1.39
RETREG3-209ENST00000590035 CAMK2N2Q96S95 79 aa6.34□□□□□ -1.39
RETREG3-209ENST00000590035 C20orf78Q9BR46 151 aa6.34□□□□□ -1.39
RETREG3-209ENST00000590035 TRAV13-1A0A0B4J241 112 aa6.33□□□□□ -1.4
RETREG3-209ENST00000590035 LINC00862A6NCI5 91 aa6.33□□□□□ -1.4
RETREG3-209ENST00000590035 C9JQL5 133 aa6.33□□□□□ -1.4
RETREG3-209ENST00000590035 TLX1NBP0CAT3 122 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms