RNA–Protein interactions for RNA: ENST00000589867.2

MBD1-221, Transcript of methyl-CpG binding domain protein 1, human

TSL 3

Gene MBD1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MBD1-221	ENST00000589867	CDC42SE2	Q9NRR3	84 aa		11.21	□□□□□ -0.61
MBD1-221	ENST00000589867	SRRM2	Q9UQ35	2752 aa	Known RBP	11.2	□□□□□ -0.62
MBD1-221	ENST00000589867	GAGE12H	A6NDE8	117 aa		11.2	□□□□□ -0.62
MBD1-221	ENST00000589867	SMR3B	P02814	79 aa	Predicted RBP	11.2	□□□□□ -0.62
MBD1-221	ENST00000589867	C15orf56	Q8N910	161 aa		11.2	□□□□□ -0.62
MBD1-221	ENST00000589867	OR5A1	Q8NGJ0	315 aa		11.2	□□□□□ -0.62
MBD1-221	ENST00000589867	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	11.2	□□□□□ -0.62
MBD1-221	ENST00000589867	SMIM2	Q9BVW6	85 aa		11.2	□□□□□ -0.62
MBD1-221	ENST00000589867	C10orf91	Q5T1B1	145 aa		11.19	□□□□□ -0.62
MBD1-221	ENST00000589867	SEC11C	Q9BY50	192 aa		11.19	□□□□□ -0.62
MBD1-221	ENST00000589867	UBE2D4	Q9Y2X8	147 aa		11.19	□□□□□ -0.62
MBD1-221	ENST00000589867	LINC00959	A0A1B0GUT2	108 aa		11.18	□□□□□ -0.62
MBD1-221	ENST00000589867	PHOX2A	O14813	284 aa		11.18	□□□□□ -0.62
MBD1-221	ENST00000589867	PPBP	P02775	128 aa		11.18	□□□□□ -0.62
MBD1-221	ENST00000589867	FCER1G	P30273	86 aa		11.18	□□□□□ -0.62
MBD1-221	ENST00000589867	FOXI1	Q12951	378 aa		11.18	□□□□□ -0.62
MBD1-221	ENST00000589867	KIR2DL4	Q99706	377 aa		11.18	□□□□□ -0.62
MBD1-221	ENST00000589867	TMEM136	Q6ZRR5	245 aa		11.17	□□□□□ -0.62
MBD1-221	ENST00000589867	ORMDL3	Q8N138	153 aa		11.17	□□□□□ -0.62
MBD1-221	ENST00000589867	ZNF664	Q8N3J9	261 aa		11.17	□□□□□ -0.62
MBD1-221	ENST00000589867	BTF3L4	Q96K17	158 aa		11.17	□□□□□ -0.62
MBD1-221	ENST00000589867	CSDC2	Q9Y534	153 aa	Known RBP	11.17	□□□□□ -0.62
MBD1-221	ENST00000589867	TCAP	O15273	167 aa		11.16	□□□□□ -0.62
MBD1-221	ENST00000589867	RPL39	P62891	51 aa	Known RBP	11.16	□□□□□ -0.62
MBD1-221	ENST00000589867	DGAT2L7P	Q6IED9	249 aa		11.16	□□□□□ -0.62
MBD1-221	ENST00000589867	C9orf163	Q8N9P6	203 aa		11.16	□□□□□ -0.62
MBD1-221	ENST00000589867	CLRN3	Q8NCR9	226 aa		11.16	□□□□□ -0.62
MBD1-221	ENST00000589867	PRELID3A	Q96N28	172 aa		11.16	□□□□□ -0.62
MBD1-221	ENST00000589867	IMMP2L	Q96T52	175 aa		11.16	□□□□□ -0.62
MBD1-221	ENST00000589867	PRSS47	A8MTI9	375 aa		11.15	□□□□□ -0.62
MBD1-221	ENST00000589867	CNBP	P62633	177 aa	Known RBP	11.15	□□□□□ -0.62
MBD1-221	ENST00000589867	RNASE13	Q5GAN3	156 aa	Known RBP	11.15	□□□□□ -0.62
MBD1-221	ENST00000589867		Q5VSD8	79 aa		11.15	□□□□□ -0.62
MBD1-221	ENST00000589867	SCX	Q7RTU7	201 aa		11.15	□□□□□ -0.62
MBD1-221	ENST00000589867	TMEM101	Q96IK0	257 aa		11.15	□□□□□ -0.62
MBD1-221	ENST00000589867	EPM2A	B3EWF7	344 aa		11.14	□□□□□ -0.63
MBD1-221	ENST00000589867	PANO1	I0J062	215 aa		11.14	□□□□□ -0.63
MBD1-221	ENST00000589867	CCL25	O15444	150 aa		11.14	□□□□□ -0.63
MBD1-221	ENST00000589867		Q6ZUT4	128 aa		11.14	□□□□□ -0.63
MBD1-221	ENST00000589867	TIMM21	Q9BVV7	248 aa		11.14	□□□□□ -0.63
MBD1-221	ENST00000589867	CTDSP1	Q9GZU7	261 aa		11.14	□□□□□ -0.63
MBD1-221	ENST00000589867	CARHSP1	Q9Y2V2	147 aa	Known RBP	11.14	□□□□□ -0.63
MBD1-221	ENST00000589867	hDV102S1	A0JD36	115 aa		11.13	□□□□□ -0.63
MBD1-221	ENST00000589867	XCL1	P47992	114 aa		11.13	□□□□□ -0.63
MBD1-221	ENST00000589867	SDIM1	Q6ZPB5	146 aa		11.13	□□□□□ -0.63
MBD1-221	ENST00000589867	CHAC1	Q9BUX1	264 aa		11.13	□□□□□ -0.63
MBD1-221	ENST00000589867	FLG2	Q5D862	2391 aa	Predicted RBP	11.13	□□□□□ -0.63
MBD1-221	ENST00000589867	MYCBP2	O75592	4640 aa		11.12	□□□□□ -0.63
MBD1-221	ENST00000589867	OPRPN	Q99935	248 aa	Predicted RBP	11.12	□□□□□ -0.63
MBD1-221	ENST00000589867	HIGD2B	Q4VC39	106 aa		11.11	□□□□□ -0.63
MBD1-221	ENST00000589867	CIRBP-AS1	Q8TBR5	109 aa		11.11	□□□□□ -0.63
MBD1-221	ENST00000589867	LAMTOR2	Q9Y2Q5	125 aa		11.11	□□□□□ -0.63
MBD1-221	ENST00000589867	GVQW2	A0A096LPI5	108 aa	Predicted RBP	11.1	□□□□□ -0.63
MBD1-221	ENST00000589867	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	11.1	□□□□□ -0.63
MBD1-221	ENST00000589867	TRAV9-1	A0A075B6T8	112 aa		11.09	□□□□□ -0.63
MBD1-221	ENST00000589867	LOC389332	A0A1B0GUA5	103 aa		11.09	□□□□□ -0.63
MBD1-221	ENST00000589867	CD164L2	Q6UWJ8	174 aa		11.09	□□□□□ -0.63
MBD1-221	ENST00000589867	PKHD1L1	Q86WI1	4243 aa		11.08	□□□□□ -0.64
MBD1-221	ENST00000589867	SS18	Q15532	418 aa		11.08	□□□□□ -0.64
MBD1-221	ENST00000589867	KIAA1644	Q3SXP7	199 aa		11.08	□□□□□ -0.64
MBD1-221	ENST00000589867	TMEM18	Q96B42	140 aa		11.08	□□□□□ -0.64
MBD1-221	ENST00000589867	TRAV13-1	A0A0B4J241	112 aa		11.07	□□□□□ -0.64
MBD1-221	ENST00000589867	KRTAP10-4	P60372	401 aa	Predicted RBP	11.07	□□□□□ -0.64
MBD1-221	ENST00000589867	MRPS36	P82909	103 aa	Known RBP	11.07	□□□□□ -0.64
MBD1-221	ENST00000589867	CIRBP	Q14011	172 aa	Known RBP	11.07	□□□□□ -0.64
MBD1-221	ENST00000589867	CFAP161	Q6P656	301 aa		11.07	□□□□□ -0.64
MBD1-221	ENST00000589867		Q8N8P6	123 aa		11.07	□□□□□ -0.64
MBD1-221	ENST00000589867	LINC00526	Q96FQ7	95 aa		11.07	□□□□□ -0.64
MBD1-221	ENST00000589867	MAP1LC3A	Q9H492	121 aa		11.07	□□□□□ -0.64
MBD1-221	ENST00000589867	SPANXA1	Q9NS26	97 aa		11.07	□□□□□ -0.64
MBD1-221	ENST00000589867	C1orf196	B1AJZ1	125 aa		11.05	□□□□□ -0.64
MBD1-221	ENST00000589867	SMAGP	Q0VAQ4	97 aa		11.05	□□□□□ -0.64
MBD1-221	ENST00000589867	RHEB	Q15382	184 aa		11.05	□□□□□ -0.64
MBD1-221	ENST00000589867	LINC00528	Q8N1L1	170 aa		11.05	□□□□□ -0.64
MBD1-221	ENST00000589867	AP5S1	Q9NUS5	200 aa		11.05	□□□□□ -0.64
MBD1-221	ENST00000589867	IGHV1-58	A0A0C4DH39	117 aa		11.04	□□□□□ -0.64
MBD1-221	ENST00000589867	CHTF8	P0CG12	524 aa		11.04	□□□□□ -0.64
MBD1-221	ENST00000589867	RAB5A	P20339	215 aa		11.04	□□□□□ -0.64
MBD1-221	ENST00000589867	GNB1L	Q9BYB4	327 aa		11.04	□□□□□ -0.64
MBD1-221	ENST00000589867	RPS10P5	Q9NQ39	176 aa		11.04	□□□□□ -0.64
MBD1-221	ENST00000589867	PYGO1	Q9Y3Y4	419 aa		11.04	□□□□□ -0.64
MBD1-221	ENST00000589867	IGLV4-3	A0A075B6K6	122 aa		11.03	□□□□□ -0.64
MBD1-221	ENST00000589867	IGHV3-64	A0A075B6Q5	118 aa		11.03	□□□□□ -0.64
MBD1-221	ENST00000589867	FAM229A	H3BQW9	127 aa		11.03	□□□□□ -0.64
MBD1-221	ENST00000589867	IFI27	P40305	119 aa	Predicted RBP	11.03	□□□□□ -0.64
MBD1-221	ENST00000589867	INAFM2	P0DMQ5	153 aa		11.02	□□□□□ -0.65
MBD1-221	ENST00000589867	C5orf38	Q86SI9	138 aa		11.02	□□□□□ -0.65
MBD1-221	ENST00000589867	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	11.01	□□□□□ -0.65
MBD1-221	ENST00000589867	IGHV3OR16-9	A0A0B4J2B5	98 aa		11.01	□□□□□ -0.65
MBD1-221	ENST00000589867	S100P	P25815	95 aa		11.01	□□□□□ -0.65
MBD1-221	ENST00000589867	ZC2HC1B	Q5TFG8	222 aa		11.01	□□□□□ -0.65
MBD1-221	ENST00000589867	LINC00173	Q6ZV60	143 aa		11.01	□□□□□ -0.65
MBD1-221	ENST00000589867	PRSS3P2	Q8NHM4	247 aa		11.01	□□□□□ -0.65
MBD1-221	ENST00000589867	COX7A2L	O14548	114 aa		11	□□□□□ -0.65
MBD1-221	ENST00000589867	COX6A2	Q02221	97 aa		11	□□□□□ -0.65
MBD1-221	ENST00000589867	C2orf66	Q6UXQ4	117 aa		11	□□□□□ -0.65
MBD1-221	ENST00000589867	SPACA4	Q8TDM5	124 aa		11	□□□□□ -0.65
MBD1-221	ENST00000589867	ALKBH7	Q9BT30	221 aa	Predicted RBP	11	□□□□□ -0.65
MBD1-221	ENST00000589867	NXT2	Q9NPJ8	142 aa	Known RBP	11	□□□□□ -0.65
MBD1-221	ENST00000589867	TGIF2-C20orf24	A0A0A6YYL0	155 aa		10.99	□□□□□ -0.65

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