RNA–Protein interactions for RNA: ENST00000588915.1

VMP1-209, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 231 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-209ENST00000588915 FOXA3P55318 350 aaPredicted RBP8.66□□□□□ -1.02
VMP1-209ENST00000588915 MRPL52Q86TS9 123 aaKnown RBP8.66□□□□□ -1.02
VMP1-209ENST00000588915 ISOC2Q96AB3 205 aa8.66□□□□□ -1.02
VMP1-209ENST00000588915 A8MWL6 223 aa8.65□□□□□ -1.02
VMP1-209ENST00000588915 K7EN84 100 aa8.65□□□□□ -1.02
VMP1-209ENST00000588915 PTTG1IPP53801 180 aa8.65□□□□□ -1.02
VMP1-209ENST00000588915 FAM231DQ6ZW35 169 aa8.65□□□□□ -1.02
VMP1-209ENST00000588915 MRAP2Q96G30 205 aa8.65□□□□□ -1.02
VMP1-209ENST00000588915 CDC42SE2Q9NRR3 84 aa8.65□□□□□ -1.02
VMP1-209ENST00000588915 LOC107984640A0A0U1RRK4 108 aa8.64□□□□□ -1.03
VMP1-209ENST00000588915 ODF1Q14990 250 aa8.64□□□□□ -1.03
VMP1-209ENST00000588915 ZNF664Q8N3J9 261 aa8.64□□□□□ -1.03
VMP1-209ENST00000588915 LINC00526Q96FQ7 95 aa8.64□□□□□ -1.03
VMP1-209ENST00000588915 ST20Q9HBF5 79 aa8.64□□□□□ -1.03
VMP1-209ENST00000588915 GATCO43716 136 aaKnown RBP8.63□□□□□ -1.03
VMP1-209ENST00000588915 TSHBP01222 138 aa8.63□□□□□ -1.03
VMP1-209ENST00000588915 CAMPP49913 170 aa8.63□□□□□ -1.03
VMP1-209ENST00000588915 POLR2KP53803 58 aaKnown RBP8.63□□□□□ -1.03
VMP1-209ENST00000588915 CT83Q5H943 113 aa8.63□□□□□ -1.03
VMP1-209ENST00000588915 TRBV27A0A0K0K1C4 114 aa8.62□□□□□ -1.03
VMP1-209ENST00000588915 C1orf196B1AJZ1 125 aa8.62□□□□□ -1.03
VMP1-209ENST00000588915 TMEM250H0YL14 139 aa8.62□□□□□ -1.03
VMP1-209ENST00000588915 SMAGPQ0VAQ4 97 aa8.62□□□□□ -1.03
VMP1-209ENST00000588915 TMEM191AQ9H0A3 160 aa8.62□□□□□ -1.03
VMP1-209ENST00000588915 CSDC2Q9Y534 153 aaKnown RBP8.62□□□□□ -1.03
VMP1-209ENST00000588915 IGLV4-69A0A075B6H9 119 aa8.61□□□□□ -1.03
VMP1-209ENST00000588915 C7orf77A4D0Y5 90 aa8.61□□□□□ -1.03
VMP1-209ENST00000588915 MALP21145 153 aa8.61□□□□□ -1.03
VMP1-209ENST00000588915 SLC51BQ86UW2 128 aa8.61□□□□□ -1.03
VMP1-209ENST00000588915 NUP35Q8NFH5 326 aa8.61□□□□□ -1.03
VMP1-209ENST00000588915 BORCS7Q96B45 105 aa8.61□□□□□ -1.03
VMP1-209ENST00000588915 C2orf48Q96LS8 159 aa8.61□□□□□ -1.03
VMP1-209ENST00000588915 TMEM242Q9NWH2 141 aa8.61□□□□□ -1.03
VMP1-209ENST00000588915 A0A1W2PNN7 141 aa8.6□□□□□ -1.03
VMP1-209ENST00000588915 COX7A2LO14548 114 aa8.6□□□□□ -1.03
VMP1-209ENST00000588915 GAGE2BQ13066 116 aa8.6□□□□□ -1.03
VMP1-209ENST00000588915 A0A1B0GUT8 65 aa8.59□□□□□ -1.03
VMP1-209ENST00000588915 VCYO14598 125 aa8.59□□□□□ -1.03
VMP1-209ENST00000588915 APOMO95445 188 aa8.59□□□□□ -1.03
VMP1-209ENST00000588915 GAS8-AS1O95177 125 aa8.58□□□□□ -1.04
VMP1-209ENST00000588915 PPP1R17O96001 155 aa8.58□□□□□ -1.04
VMP1-209ENST00000588915 RAB4AP20338 218 aa8.58□□□□□ -1.04
VMP1-209ENST00000588915 CAMK2N2Q96S95 79 aa8.58□□□□□ -1.04
VMP1-209ENST00000588915 PSORS1C2Q9UIG4 136 aa8.58□□□□□ -1.04
VMP1-209ENST00000588915 MT-ND6P03923 174 aa8.57□□□□□ -1.04
VMP1-209ENST00000588915 RNF151Q2KHN1 245 aa8.57□□□□□ -1.04
VMP1-209ENST00000588915 C9orf116Q5BN46 136 aaPredicted RBP8.57□□□□□ -1.04
VMP1-209ENST00000588915 TSKUQ8WUA8 353 aa8.57□□□□□ -1.04
VMP1-209ENST00000588915 HIGD1CA8MV81 97 aa8.56□□□□□ -1.04
VMP1-209ENST00000588915 F8WDY8 70 aa8.56□□□□□ -1.04
VMP1-209ENST00000588915 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.56□□□□□ -1.04
VMP1-209ENST00000588915 FCER1GP30273 86 aa8.56□□□□□ -1.04
VMP1-209ENST00000588915 TCTE3Q8IZS6 198 aa8.56□□□□□ -1.04
VMP1-209ENST00000588915 UBE2D4Q9Y2X8 147 aa8.56□□□□□ -1.04
VMP1-209ENST00000588915 BLOC1S1P78537 153 aa8.55□□□□□ -1.04
VMP1-209ENST00000588915 KIR2DL4Q99706 377 aa8.55□□□□□ -1.04
VMP1-209ENST00000588915 TIMM21Q9BVV7 248 aa8.55□□□□□ -1.04
VMP1-209ENST00000588915 SUMO2P61956 95 aaKnown RBP8.54□□□□□ -1.04
VMP1-209ENST00000588915 C1orf137Q5JT78 98 aa8.54□□□□□ -1.04
VMP1-209ENST00000588915 DIRC1Q969H9 104 aa8.54□□□□□ -1.04
VMP1-209ENST00000588915 TMEM18Q96B42 140 aa8.54□□□□□ -1.04
VMP1-209ENST00000588915 OSTCQ9NRP0 149 aa8.54□□□□□ -1.04
VMP1-209ENST00000588915 LPAP08519 4548 aa8.53□□□□□ -1.04
VMP1-209ENST00000588915 PPP1R2P9O14990 202 aa8.53□□□□□ -1.04
VMP1-209ENST00000588915 RPL18AQ02543 176 aaKnown RBP8.53□□□□□ -1.04
VMP1-209ENST00000588915 RIGQ13278 110 aa8.53□□□□□ -1.04
VMP1-209ENST00000588915 C5orf38Q86SI9 138 aa8.53□□□□□ -1.04
VMP1-209ENST00000588915 AMN1Q8IY45 258 aa8.53□□□□□ -1.04
VMP1-209ENST00000588915 OR10D4PQ8NGN7 298 aa8.53□□□□□ -1.04
VMP1-209ENST00000588915 IMMP2LQ96T52 175 aa8.53□□□□□ -1.04
VMP1-209ENST00000588915 MRPL35Q9NZE8 188 aaKnown RBP8.53□□□□□ -1.04
VMP1-209ENST00000588915 TRAV13-1A0A0B4J241 112 aa8.52□□□□□ -1.05
VMP1-209ENST00000588915 PHF5AQ7RTV0 110 aaKnown RBP8.52□□□□□ -1.05
VMP1-209ENST00000588915 LINC01551Q86U37 167 aa8.52□□□□□ -1.05
VMP1-209ENST00000588915 NRACQ8N912 160 aa8.52□□□□□ -1.05
VMP1-209ENST00000588915 TCAPO15273 167 aa8.51□□□□□ -1.05
VMP1-209ENST00000588915 IGLV7-43P04211 117 aa8.51□□□□□ -1.05
VMP1-209ENST00000588915 SPAG11BQ08648 103 aa8.51□□□□□ -1.05
VMP1-209ENST00000588915 SMIM7Q9BQ49 75 aa8.51□□□□□ -1.05
VMP1-209ENST00000588915 LINC00862A6NCI5 91 aa8.5□□□□□ -1.05
VMP1-209ENST00000588915 TLX1NBP0CAT3 122 aa8.5□□□□□ -1.05
VMP1-209ENST00000588915 RPL32P62910 135 aaKnown RBP8.5□□□□□ -1.05
VMP1-209ENST00000588915 TMEM241Q24JQ0 296 aa8.5□□□□□ -1.05
VMP1-209ENST00000588915 OPRPNQ99935 248 aaPredicted RBP8.5□□□□□ -1.05
VMP1-209ENST00000588915 C20orf78Q9BR46 151 aa8.5□□□□□ -1.05
VMP1-209ENST00000588915 IGLV1-50A0A075B6I6 118 aa8.49□□□□□ -1.05
VMP1-209ENST00000588915 SMKR1H3BMG3 65 aa8.49□□□□□ -1.05
VMP1-209ENST00000588915 CEBPGP53567 150 aa8.49□□□□□ -1.05
VMP1-209ENST00000588915 RNASE13Q5GAN3 156 aaKnown RBP8.49□□□□□ -1.05
VMP1-209ENST00000588915 Q6ZUT4 128 aa8.49□□□□□ -1.05
VMP1-209ENST00000588915 PRR26Q8N8Z3 221 aa8.49□□□□□ -1.05
VMP1-209ENST00000588915 TRBV24-1A0A075B6N3 115 aa8.48□□□□□ -1.05
VMP1-209ENST00000588915 A0A087WZ39 114 aa8.48□□□□□ -1.05
VMP1-209ENST00000588915 IGHV3OR16-9A0A0B4J2B5 98 aa8.48□□□□□ -1.05
VMP1-209ENST00000588915 H0Y9J4 135 aa8.48□□□□□ -1.05
VMP1-209ENST00000588915 NDUFA1O15239 70 aa8.48□□□□□ -1.05
VMP1-209ENST00000588915 FAM104BQ5XKR9 115 aa8.48□□□□□ -1.05
VMP1-209ENST00000588915 V9GYV3 84 aa8.48□□□□□ -1.05
VMP1-209ENST00000588915 ZNF727A8MUV8 499 aa8.47□□□□□ -1.05
VMP1-209ENST00000588915 MRPS36P82909 103 aaKnown RBP8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms